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A type III-like restriction endonuclease functions as a major barrier to
A type III-like restriction endonuclease functions as a major barrier to

... recognition sequence, and identical sequences indicate identical recognition sequences, whereas differences in the TRD indicate different target sequences. Based on our sequence alignment, three of the four TRDs from NCTC 8325 are different from those of UAMS-1, but only one is different from SA564. ...
Novel Molecular Methods for Discovery and Engineering of
Novel Molecular Methods for Discovery and Engineering of

... found to be thermally stable and resistant towards denaturing agents (Bertoldo and Antranikian, 2002). Therefore, it seems that marine microorganisms become a rich reservoir of interesting new biocatalysts. For many years, discovery of new biocatalysts from microorganisms are mostly based on cultiva ...
MAK, a computational tool kit for automated MITE
MAK, a computational tool kit for automated MITE

Slide 1
Slide 1

... 1900 Pearl Millet EST sequences blastn 650 Pearl millet EST show good homology with rice (34%) ...
Sequenced Mitochondrial Genomes of Bryophytes
Sequenced Mitochondrial Genomes of Bryophytes

... determined using electron microscopy and restriction endonuclease mapping. The mitochondrial genome of M. polymorpha was found to be a single circular molecule which consists of about 186609 base pairs (bp). Several genes including genes for three species of ribosomal RNA, transfer RNA and 30 open r ...
PPT - Bioinformatics.ca
PPT - Bioinformatics.ca

Shastry, B.S. 2002. SNP alleles in human disease and evolution
Shastry, B.S. 2002. SNP alleles in human disease and evolution

... for evolutionary biology studies, gene discovery and mapping, prediction of drug and environmental response, diagnostic tests, heterogeneity testing, and association studies (Gray et al. 2000; Schork et al. 2000). For the purpose of gene discovery, SNPs are considered to be the most predominant segr ...
Obtain total affinity and occupancies for binding site
Obtain total affinity and occupancies for binding site

... be a transcription factor binding site (TFBS) if it scores above a given cutoff. The introduction of a cutoff is unsatisfactory not only because it introduces an arbitrary parameter, but also and especially because recent detailed investigations of transcription factor binding have shown it to be a ...
The 2R hypothesis and the human genome sequence
The 2R hypothesis and the human genome sequence

... loci until disomic inheritance is established (Ohno, 1970). This is important for our interpretation of what a paleopolyploid genome should look like because one of the properties we test in assessing genome duplication is the synchronicity of divergence of duplicated loci. Depending on the manner a ...
1 Comp. Funct. Genom. Copyright © (2002) John Wiley & Sons, Ltd.
1 Comp. Funct. Genom. Copyright © (2002) John Wiley & Sons, Ltd.

Cocci.GR.letter
Cocci.GR.letter

... Onygenales in general) shifting from plants to animals provide very strong evidence to support the hypotheses that proteases are involved in the shift and have made this point more clear in the manuscript. Regarding the case of pathogenicity, genes that we have identified by rate of evolution, selec ...
記錄 編號 3862 狀態 NC090FJU00112010 助教 查核 索書 號 學校
記錄 編號 3862 狀態 NC090FJU00112010 助教 查核 索書 號 學校

... Moffett, M. 1971. Host range of the ginger strain of Pseudomonas solanacearum in Queensland. Aust. J. Exp. Agric. Anim. Husb. 11: 696-698. Ploetz, R. C., Zentmyer, G. A., Nishijima, W. T., Rohrbach, K. G., and Ohr, H. D. eds. 1994. Compendium of Tropical Fruit Diseases. American Phytopathological So ...
Full Text  - Genes | Genomes | Genetics
Full Text - Genes | Genomes | Genetics

... GO-Slim analysis GO analysis was performed using the GO-Slim Mapper tool implemented in the Saccharomyces Genome Database (http://yeastgenome. org/cgi-bin/GO/goSlimMapper.pl). GO-Slim Mapper was used rather than standard GO Term finder because of the smaller, less redundant number of ontology terms u ...
S. latifolia sex-linked genes, p. 1 Evolutionary strata on
S. latifolia sex-linked genes, p. 1 Evolutionary strata on

... from a cDNA library, and analyzing their segregation in S. latifolia. The general approach of using length variants has been used previously (FELTUS et al. 2006), but we have refined the method so that it is highly sensitive but low-cost. We refer to this method as “ISVS”. Figure 1 here To identify ...
Regulation of biosynthesis and transport of aromatic amino acids in
Regulation of biosynthesis and transport of aromatic amino acids in

Structural variations in the human genome
Structural variations in the human genome

... The (severity of the) effects of structural variations on phenotype depend on a combination of the location and the type of structural variation. The location is presumably even the most important factor in defining the consequence, since a mutation in so-called ‘junk DNA’ might not even have any co ...
Gene regulation in three dimensions
Gene regulation in three dimensions

... Last, but not least I would like to thank Julie my fiancé who has supported me and been there for me when I needed it the most. K.T.W ...
Identification of genes required for hydrogenase activity in
Identification of genes required for hydrogenase activity in

... compared with WT control cells. Measurements of lightinduced, H2 -production rates showed that the sta7-10 mutant is able to photoproduce H2 at low rates after a short period of anaerobic induction, followed by a gradual decrease in the rates up to 7 h of incubation. The parental strain, on the othe ...
Table S1.
Table S1.

... conserved, computationally identified, transcription factor binding sites in window (XXX stands for any transcription factor with a known binding matrix – all TFs starting with the same three letters are assumed to for a group and are counted together) ...
Supplementary document Trehalose/2
Supplementary document Trehalose/2

... method (Falicia Goh et al 2011). Cell pellets were washed three times in a sterile isotonic ...
Automatic detection of conserved gene clusters in
Automatic detection of conserved gene clusters in

RNA Polymerases
RNA Polymerases

... Many RNA Pol III genes also rely on upstream sequences for the regulation of their transcription. Some promoters such as the U6 small nuclear RNA (U6 snRNA ) and small RNA genes from the Epstein-Barr virus use only regulatory sequences upstream from their transcription start sites. The coding region ...
Leishmania donovani - Oxford Academic
Leishmania donovani - Oxford Academic

... *To whom correspondence should be addressed. Tel: +91 33 473 6793; Fax: +91 33 473 5197; Email: [email protected] The authors wish it to be known that, in their opinion, the first two authors should be regarded as joint First Authors ...
Chapt 16: Other RNA Processing 16.1 Ribosomal RNA Processing
Chapt 16: Other RNA Processing 16.1 Ribosomal RNA Processing

... MicroRNAs (miRNAs) and Gene Silencing • MicroRNAs - 18-25 nt RNAs produced by cleavage from 75-nt stem-loop precursor RNA • Dicer RNase cleaves ds stem part of precursor to yield miRNA in ds form • Single-stranded form of miRNAs joins Argonaute protein in RISC to control gene expression by basepairi ...
NIH Public Access
NIH Public Access

... [20]. The authors addressed biological significance in their study by employing statistical analyses that are used in genome evolution studies, the premise of which is that the higher the ratio of non-synonymous to synonymous mutations, the more likely there has been biological selection. The number ...
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Non-coding DNA

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