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Comparative Sequence Analysis between Human and Mouse
Comparative Sequence Analysis between Human and Mouse

... constructed, which made possible comprehensive and reliable identification of promoter regions. Based on these data, some pioneering works for human and mouse promoter regions were carried out. Suzuki et al. [1] identified blocks of highly conserved regions in orthologous promoter sequences, and Iwa ...
PDF
PDF

... oocyte maturation, and identify crucial roles for Notch signalling and Gαsadenylate cyclase (GαAC) in both oocyte growth and maturation. In their first study (see p. 2211), these researchers report that all germline MSP-dependent oocyte meiotic maturation events require GαAC signalling in the somati ...
Pair-rule genes
Pair-rule genes

... Activator domains may interact with coactivators that in turn bind to components of the basal apparatus. Repressor domains also interact with the transcription apparatus. The repressor Eve, for example, interacts directly with TFIID. ...
Genetics and Recombinant DNA
Genetics and Recombinant DNA

... • Prophase: The chromatin, diffuse in interphase, condenses into chromosomes. Each chromosome has duplicated and now consists of two sister chromatids. At the end of prophase, the nuclear envelope breaks down into vesicles. • Metaphase: The chromosomes align at the equitorial plate and are held in p ...
Example of the Course Test 4 2nd April, 8:00, registration from 7:30
Example of the Course Test 4 2nd April, 8:00, registration from 7:30

... c) uric acid is formed in a reaction catalysed by xanthine oxidase d) purine nucleotides require folic acid for their de novo synthesis 4) Select correct statements a) Each oocyte is at the end of the 1st meiotic prophase (a stage called dictyotene) at the time of birth of female baby b) Chromosomes ...
Regulatory mechanism of membrane protein production in an EPA
Regulatory mechanism of membrane protein production in an EPA

... demonstrated that the presence of EPA-PLs did not affect the local environments of Omp417 Trp residues. This result suggests that EPA-PLs are not involved in the folding of this protein at low temperatures. On the other hand, the transcription of omp417 was suppressed in the ΔEPA mutant, and the amo ...
Alignments -> Database Searching
Alignments -> Database Searching

... Protein function can be divided into three broad areas: molecular function, biological process and cellular component. Molecular function describes activity at the molecular level, such as catalysis, which is commonly predicted through methods that identify homologues or orthologues. Biological pro ...
Gene exspression
Gene exspression

... Stress ResponseESR • ~300 induced genes (60% uncharacterized) – Carbohydrate metabolism – Detoxification of reactive oxygen – DNA damage repair – Metabolite transport – Intracellular signaling • Many of these genes have previously been proposed to function as cellular protection of stress. ...
The Role of Oocyte‐Secreted Factors GDF9 and BMP15 in Follicular
The Role of Oocyte‐Secreted Factors GDF9 and BMP15 in Follicular

... 1998; Hashimoto et al. 2005; Li et al. 2009), O-glycosylation (Saito et al. 2008) and C-phosphorylation (McMahon et al. 2008). The amino acid sequence of mouse GDF9 contains four putative N-linked glycosylation sites, one of which is located in the mature region (McPherron and Lee 1993; Gilchrist et ...
Epigenomics Workshop - Institute for Systems Genomics
Epigenomics Workshop - Institute for Systems Genomics

... recently developed in her lab cutting-edge epigenomic techniques, ChIP-Seq, ATACSeq, DNA methylomic analysis par Capture Array, as well as pyrosequencing analysis of DNA methylation, in order to investigate the genome-wide modifications of the chromatin landscape induced by prenatal stress. The UMR ...
Primordial Germ Cells
Primordial Germ Cells

... BMP15 gene is expressed in the sheep oocytes and that there was a one base pair difference between the BMP15 genes of wild-type and Inverdale sheep (Galloway et al. 2000; Griggs 2000). It appears that one dose of the mutant BMP15 gene causes twin and triplet births, while homozygosity at that locus ...
Gene Mapping
Gene Mapping

... • The map distance (cM) between two genes equals one half the average number of crossovers in that region per meiotic cell • The recombination frequency between two genes indicates how much recombination is actually observed in a particular experiment; it is a measure of recombination • Over an inte ...
Escape from Senescence in Hybrid Cell Clones Involves Deletions
Escape from Senescence in Hybrid Cell Clones Involves Deletions

... more markerson chromosomelq. Two regionswith deletionswere de tected,oneof whichhasbeenshownto be implicatedin the senescence inducing effect exerted by chromosome 1 following monochromosome transfer(P. J. Vojta el aL, manuscriptsubmittedfor publication).The present study suggeststhat two separatelo ...
to get the file - Chair of Computational Biology
to get the file - Chair of Computational Biology

... Period : time to complete one cycle. Phase : time of day for any given event. E.g. if the peak in a rhythm occurred at dawn, the phase of the peak would be defined as 0 h. Phase is often defined in zeitgeber time (ZT). Zeitgeber is German for time giver, and any stimulus that imparts time informatio ...
Biology 504 Name: Mid-Year Exam Review Spontaneous
Biology 504 Name: Mid-Year Exam Review Spontaneous

... 1. What is meant by spontaneous generation? Give 3 examples of the “appearance” of living things that people believed were caused by this phenomenon. The idea that living things can arise from non-living things. Ex: Mold on bread, mice from rags, spring rains=frogs from mud, maggots on meat 2. Durin ...
Station Lab Part 2
Station Lab Part 2

... and starches you eat into a simple sugar called glucose, which it uses for energy. Insulin is a hormone that the body needs to get glucose from the bloodstream into the cells of the body. Type 1 and Type 2 diabetes have different causes. Yet two factors are important in both. You inherit a predispos ...
Chapter 2 need to know
Chapter 2 need to know

... • Cause: Recessive gene (victims are homozygous, but heterozygous subjects are also mildly affected) • Traits: Abnormal blood cells cause circulatory problems (e.g., heart enlargement) and severe anemia • Incidence: 8-9% of U.S. blacks • Outlook: Crippling, but treatable with medication ...
Supplementary Information (doc 116K)
Supplementary Information (doc 116K)

... transcription (GenBank, AB034697, BC019780 and AB077438) of the Jdp2 gene (Supplementary Figure S7A). We confirmed that the promoter region of Jdp2 (the XbaI/BamHI DNA fragment) had the full transcriptional activity of the Jdp2 gene in luciferase reporter assays with a deletion series generated from ...
Chapter 11
Chapter 11

... Coordinating Eukaryotic Gene Expression • Coordinated gene expression in eukaryotes – Seems to depend on the association of enhancers with groups of genes ...
The role of differentiation in the suppression of malignancy*
The role of differentiation in the suppression of malignancy*

... imposition of the terminal differentiation programme of the fibroblast that brings the progressive cell multiplication in vivo to a halt. This work is now being analysed in greater detail, and similar experiments have been initiated with hybrids between tumour cells and normal keratinocytes. In the ...
Class4_Synthetic_Genetics
Class4_Synthetic_Genetics

... -30 different mutants X TET-promoter collection -found many interactions between dissimilar genes -claimed that there are five times as many “negative” genetic interactions for essential genes when compared to non-essential genes -however, the cause of this may be due to the fact that the TET strain ...
ERN3120 Part 1 March 25 2011 09:00-13:00
ERN3120 Part 1 March 25 2011 09:00-13:00

... 2. When the aryl hydrocarbon receptor is activated by the carcinogen TCDD, it prevents estrogen and  estrogen receptor from transcribing the tumor suppressor BRCA1. The effect is caused by epigenetic  modifications of nucleosomes at the BRCA1 promoter.  The result of the inhibition is accumulation o ...
Anna Ferreira`s presentation
Anna Ferreira`s presentation

... DEVELOPMENTAL TIMING Ecdysone ...
Cell type-specific polygenic risk profiling in schizophrenia and
Cell type-specific polygenic risk profiling in schizophrenia and

... Schizophrenia (SCZ) and Bipolar Disorder (BD) are severe neuropsychiatric disorders with high heritabilities, estimated between 60% and 80%. Recent genome-wide association studies (GWAS) have just started to shed light on the genetic architecture of these complex traits (Ripke et al., 2014; Charney ...
Down Syndrome: A Complex Disease
Down Syndrome: A Complex Disease

... Warburton D, Thaker H, Tycko B BMC Med Genet. 2006 15;7:24. ...
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NEDD9

Neural precursor cell expressed developmentally down-regulated protein 9 (NEDD-9) is a protein that in humans is encoded by the NEDD9 gene. NEDD-9 is also known as enhancer of filamentation 1 (EF1), CRK-associated substrate-related protein (CAS-L), and Cas scaffolding protein family member 2 (CASS2). An important paralog of this gene is BCAR1.
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