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Genome sequencing and analysis of Aspergillus oryzae
Genome sequencing and analysis of Aspergillus oryzae

... Phylogenetic relationship of carboxypeptidases (a), ATP-dependent proteinases (b), maltase (c) and -amylase genes (d) from the three Aspergilli were analyzed. The programs, algorithms and symbols are same with those in Fig. 3. Supplementary Figure S6. Phylogenetic analysis of metabolic genes. Phylo ...
Linear and non-linear dependencies between copy number
Linear and non-linear dependencies between copy number

... Many studies address whether and to what extent gene expression alterations correlate with chromosomal abnormalities. An early study of Hyman et al. [6] on breast cancer cell lines using aCGH reported that 44% of the highly amplified genes were over-expressed and 10.5% of the highly over-expressed g ...
Colon Cancer Colon cancer is a major health problem in the United
Colon Cancer Colon cancer is a major health problem in the United

... cancers, and African Americans are more likely to get colon cancer than individuals of other ethnic backgrounds. Conditions such as ulcerative colitis and Crohn’s disease with involvement of the colon can also have increased risk of developing colon cancer. Colon Cancer Screenings Colon cancer is on ...
Identification of a NodD repressible gene
Identification of a NodD repressible gene

... operon in R. leguminosarum bv. viciae there was a small divergently transcribed gene (px2), required for full induction of the nodFEL promoter [11], we analyzed the sequence upstream of nodM to determine whether there was an equivalent gene. We identified a 61-amino acid coding region that could cor ...
Chapter 6 – Microbial Growth
Chapter 6 – Microbial Growth

... necessary to use lactose: Z, Y, A. These only need to be turned on when lactose is present and glucose is absent. (Fig. 8.14) ii. Repression: The O site (operator) is bound by I protein. This turns off genes by blocking RNA polymerase. When lactose is present, it will bind I and pull it off. iii. Ac ...
Understanding fermentation batch variability through whole genome
Understanding fermentation batch variability through whole genome

... regulators. The network is made up of ‘transcription factors’ which interact with each other and with the genome. • The regulatory network in yeast has different controls for the early portion of the fermentation cycle and for the late portion of the cycle • Mimetics’ tools analyze the dynamics of t ...
ICGCW 2014
ICGCW 2014

... Advanced Centre for Treatment Research & Education in Cancer (ACTREC) Tata Memorial Centre (TMC), Navi Mumbai, India Workshop: 27th – 31st October 2014; Conference: 1st-2nd November, 2014 The Cancer Genetics Unit and the Indian Council for Medical Research Centre for Advanced Research (ICMR CAR) in ...
Mendel`s Legacy
Mendel`s Legacy

... affected gene (dominant or recessive) leads to the condition. - Familial hypercholesterolemia (FH) – is a condition that affects heterozygotes (1:500). The cell produces less receptors for LDL (lipids) that are required to take these lipids into the cell. Without them these lipids build up in the ar ...
Chapter 13 Meiosis - Perry Local Schools
Chapter 13 Meiosis - Perry Local Schools

... • Parent passes all of its genes to its offspring. • Uses mitosis. • Also known as cloning. • Comment - many organisms reproduce this way. ...
MENDEL AND MEIOSIS NOTES
MENDEL AND MEIOSIS NOTES

...  Dominant – the trait that you see  Recessive – the trait that is not expressed if dominant allele is present  Use same letter for allele  Capital letter for dominate  Lower case letter for recessive  Dominant (capital letter) is written first ...
Mutational Dissection
Mutational Dissection

... Mutagenized genotype is sensitized by introducing a known mutation into a gene that affects the process of interest ...
Read the article
Read the article

... The following are just a few simple examples of methods to identify the genetic information behind a trait. There are several more techniques already available and more will come since this research area is expanding rapidly. The traits an organism exhibit can be described as the response of the gen ...
lec07
lec07

... base sequences allowing catalytic activity to occur ...
Sect7Mutation
Sect7Mutation

... replaced by a GC pair. Less commonly it causes a GC pair to be replaced by AT. Modern genetic engineering can reduce or eliminate the stochasticity of mutation, allowing us to change a specific base in a specific gene in vitro, then put it back in the organism. Knockout mutations can be made in spec ...
Profiling genes expressed in human fetal cartilage using 13,155
Profiling genes expressed in human fetal cartilage using 13,155

... Table III lists some of the unique known genes (175 genes) identified in human fetal cartilage. Most of these genes were selected because they have relatively higher expression levels in a functional category (more than one EST copy). One notable feature is the profile of growth factors. Among them, ...
Chromosome challenge activity pack
Chromosome challenge activity pack

... Everyone’s DNA is different. DNA controls the colour of your eyes, skin and hair. The information in your DNA also controls the cells in your body. Sometimes there are bits of information missing, or it is a bit scrambled, and this can cause illness. The DNA in your cells is squashed into packages c ...
Fusion gene detection
Fusion gene detection

... high sensitivity and specificity of our methodology. One limitation of our method is that it does not find fusions that involve a gene that is not annotated by Ensembl. It also does not find fusion genes that involve an unannotated exon. In practice, however, this is not a significant limitation, si ...
5.4 Asexual Reproduction
5.4 Asexual Reproduction

... cell, one from each of two parents. • Offspring are genetically unique • Have a mixture of genes from both parents ...
Local Regulation of Homeostasis Favors Chromosomal
Local Regulation of Homeostasis Favors Chromosomal

... Cancer susceptibility genes belong to one of two groups: gatekeepers and caretakers [1]. Mutations in gatekeeper genes such as tumor suppressor (TSP) genes and oncogenes alter the growth regulatory or differentiation pathways of the cell [2–6]. These mutations confer a relative selective advantage t ...
ClusteringLab_2012_ANSWERS
ClusteringLab_2012_ANSWERS

... ethanol (*analyzed separately) are included in this file. Note the gene annotations visible in Treeview include “HS” or “EtOH” if the gene met the 5% FDR cutoff in each respective experiment. NEW_HS+EtOH+H2O2+aa+starvation_90p.txt: This file contains the RNA-seq data used in the above analysis merge ...
Chap 11 PowerPoint Notes
Chap 11 PowerPoint Notes

... NOTE: Sometimes interaction between 2 gene pairs results in a phenotype that neither pair can produce alone. Comb shape in chickens can result in 4 types depending on the interactions of 2 gene pairs (R & P) Fig. 11.15, p. 185 ...
Origin of Eukaryotic Cells
Origin of Eukaryotic Cells

... million years back into the Paleoproterozoic era, and has brought new insights into the origin of the eukaryotic cell. Biologists who support the reduction scenario found themselves some powerful evidence. There are the so called Eukaryotic Signature Proteins (ESPs), proteins only found in eukaryote ...
Blank notes - local.brookings.k12.sd.us
Blank notes - local.brookings.k12.sd.us

... 1st to suggest genes dictate phenotypes through enzymes that catalyze specific chemical ...
genetic control of pigment differentiation in somatic cells
genetic control of pigment differentiation in somatic cells

... but often the powerful tool of genetic analysis is left unused. One facet of this problem which might be particularly susceptible to analysis by use of genetic techniques is implicit in the title of this paper: the genetic control of pigment differentiation. By the term "genetic control" it is meant ...
Dihybrid Punnett Squares
Dihybrid Punnett Squares

... What are the possible genotypes and phenotypes of the children of parents that are heterozygous for round eyes with a blue body and purebred for round eyes and hybrid for a yellow body? ...
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NEDD9

Neural precursor cell expressed developmentally down-regulated protein 9 (NEDD-9) is a protein that in humans is encoded by the NEDD9 gene. NEDD-9 is also known as enhancer of filamentation 1 (EF1), CRK-associated substrate-related protein (CAS-L), and Cas scaffolding protein family member 2 (CASS2). An important paralog of this gene is BCAR1.
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