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Determining Evolutionary Relationships Using BLAST
Determining Evolutionary Relationships Using BLAST

... bioinformatics, entire genomes can be quickly compared in order to detect genetic similarities. The most powerful bioinformatics tool currently in use is BLAST which stands for Basic Local Alignment Search Tool. Using BLAST, you can input a gene sequence of interest and search entire genomic librari ...
Cellular Respiration
Cellular Respiration

... • Compare anaerobic vs. aerobic processes, and give an example of each: • What are the 2 types of Fermentation, and what does each produce? ...
Slide 1
Slide 1

... using a genetic algorithm. ...
Ch12b_Heredity
Ch12b_Heredity

... • In some cases (such as skin and hair color), there are multiple copies of the same gene (such as the melanin gene). • In many others, there are many different genes controlling a trait, and the environment may affect how a trait is expressed. (Example: human height) ...
Diffuse Gastric Cancer - Birmingham Women`s Hospital
Diffuse Gastric Cancer - Birmingham Women`s Hospital

... very high chance of developing stomach cancer. Even with screening it is possible these cancers might not be detected early. Therefore such individuals may wish to consider an operation to remove the stomach (gastrectomy). This is a serious operation, but is the most reliable way to reduce the risk ...


... Reread the chapter Big Idea and the lesson Key Concepts. Analyze the information you have learned about DNA and genetics. How do genes, environment, and life choices affect a human’s phenotype? ...
Genetics 3.4- Inheritance
Genetics 3.4- Inheritance

... product of the probability of the events occurring separately. 2. Chance of inheriting a specific allele from one parent and a specific allele from another is 1/2 x 1/2 or 1/4. 3. Possible combinations for the alleles Hh x Hh are the following: ...
DNA Polymerase
DNA Polymerase

... code for proteins along with introns that do not  Because the initial mRNA, called a pre-RNA, includes the noncoding introns, it must be processed before it can be read by the tRNA  While the mRNA is still in the nucleus, the introns are removed from the pre-RNA  The exons that remain are joined ...
Human Genetics
Human Genetics

... (the inability for blood to clot properly)  Also Colorblindness (the inability to distinguish certain colors) Gene that can cause it found on X chrom. ...
to get the file - Chair of Computational Biology
to get the file - Chair of Computational Biology

... (1) Circadian rhythms are the subset of biological rhythms with period of 24 h. The term circadian combines the Latin words ‘‘circa’’ (about) and ‘‘dies’’ (day). (2) Circadian rhythms are endogenously generated and self-sustaining, so they persist under constant environmental conditions, typically c ...
Genetics in the Generation of Antibody Diversity
Genetics in the Generation of Antibody Diversity

... • Five mechanisms generate antibody diversity in naïve B cells – Multiple gene segments―which gene segments are put together – P nucleotide addition―templated nucleotide addition between joints, resulting from assymetrical cleaving of hairpin structures – Exonuclease trimming―sometimes occurs at jun ...
Transcription
Transcription

... • The 5’ cap is a guanine nucleotide that has been methylated (7methyl guanine, m7G) and attached by a 5’5’ linkage to the first nucleotide of the transcript. There are 3 phosphate groups between the two nucleotides. • The 3’ end of newly transcribed RNA is protected by adding 100200 adenine nucleo ...
Recitation Section 16 Recombination and Pedigrees
Recitation Section 16 Recombination and Pedigrees

... 3. Recombination can occur anywhere along the length of the chromosome. However, we have been relying on the fact that genes are inherited as discreet units. How do we reconcile these two things? (Hint: think about what usually is the difference between two alleles of the same gene.) ...
Supplementary data
Supplementary data

... of the MECP2e2 isoform, as used in most previous reports). Mutations found in Glasgow as part of this study are listed separately. References for mutations reported in other studies are given where appropriate. In addition to the data in the Table, a further 9 patients without identified mutations i ...
A systematic genome-wide analysis of zebrafish protein
A systematic genome-wide analysis of zebrafish protein

... This mutation discovery and multi-allelic phenotyping pipeline systematically annotates zebrafish gene function. Importantly, the described genotype and phenotype correlations do not constitute proof of causality for the individual allele. Detailed aetiology of a phenotypegenotype correlation can on ...
Predicting TF affinities to Promoters of tissue specific genes
Predicting TF affinities to Promoters of tissue specific genes

... In Section 4.2.2 it was shown that for a given intergenic region in yeast TRAP can oftentimes successfully predict the corresponding regulating TF by ranking all PFMs according to their predicted affinities for the region. Here I address the question of whether TRAP can also accurately predict the T ...
Location Analysis of Transcription Factor Binding - CS
Location Analysis of Transcription Factor Binding - CS

... Hepatocyte targets of HNF1α • 222 genes that represent a substantial section of hepatocyte biochemistry – gluconeogenesis and associated pathways – carbohydrate synthesis and storage ...
File - Ms. Capp`s Science Site
File - Ms. Capp`s Science Site

... 20. If a baby zebra has a two recessive genes for short legs which of the following may be true? a. The father has two recessive genes. The mother has two dominant genes. b. The father has one recessive gene and one dominant gene. The mother has two dominant genes. c. The father has two dominant gen ...
pGLO Lab
pGLO Lab

... real life source of this gene is the bioluminescent jellyfish Aequorea victoria. The gene codes for a Green Fluorescent Protein which causes the jellyfish to fluoresce and glow in the dark. Following the transformation procedure, the bacteria express their newly acquired jellyfish gene and produce t ...
to get the file - Chair of Computational Biology
to get the file - Chair of Computational Biology

... Recently, Cokus et al. combined sodium bisulfite treatment of genomic DNA with ultrahigh-throughput sequencing (>20× genome coverage) to generate the first DNA methylation map for any organism at single-base resolution. This “BS-Seq” method has several advantages over microarray-based methods : 1 it ...
mutations
mutations

DNA Replication and Protein Synthesis
DNA Replication and Protein Synthesis

... 1. Topisomerase unwinds DNA and then Helicase breaks H-bonds 2. DNA primase creates RNA primers in spaced intervals 3. DNA polymerase slides along the leading strand in the 3’ to 5’ direction synthesizing the matching Okazaki fragments in the 5’ to 3’ direction 4. The RNA primers are degraded by RNa ...
From gene to protein in higher plant mitochondria
From gene to protein in higher plant mitochondria

... In chloroplasts transcription is performed by at least three different RNA polymerases, a bacterial-type RNA polymerase (PEP) encoded in the plastid genome (i.e. a chloroplastic enzyme having a sequence homologous to RNA polymerases found in bacteria) and two nuclearencoded bacteriophage-type RNA po ...
genetics
genetics

...  Insertions and Deletions  Frameshift mutation : if the deletion or insertion is not a multiple of three ...
Ch19
Ch19

... • In electron micrographs, unfolded chromatin has the appearance of beads on a string • Each “bead” is a nucleosome, the basic unit of ...
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RNA-Seq



RNA-seq (RNA sequencing), also called whole transcriptome shotgun sequencing (WTSS), is a technology that uses the capabilities of next-generation sequencing to reveal a snapshot of RNA presence and quantity from a genome at a given moment in time.
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