as a PDF
... Health Grants NS23740 and HD18658. The costs of publication of generation of skeletal muscle isoformdiversity is as yet unexthis article were defrayed in part by the payment of page charges. plained. In humans, only one gene has been identified, that This article must therefore be hereby marked “adv ...
... Health Grants NS23740 and HD18658. The costs of publication of generation of skeletal muscle isoformdiversity is as yet unexthis article were defrayed in part by the payment of page charges. plained. In humans, only one gene has been identified, that This article must therefore be hereby marked “adv ...
$doc.title
... found to be significantly up- or down regulated (more than 2-fold) by analysis of 8 arrays with Acuity and GenePix Pro6.1 using Loess normalization (Bonferroni corrected p value < 0.005). From the complete gene list, the twenty most highly differentially expressed genes along with two other genes f ...
... found to be significantly up- or down regulated (more than 2-fold) by analysis of 8 arrays with Acuity and GenePix Pro6.1 using Loess normalization (Bonferroni corrected p value < 0.005). From the complete gene list, the twenty most highly differentially expressed genes along with two other genes f ...
Drosophila melanogaster
... rather than the normal red eyes. Drosophila quickly became one of the most important organisms used in genetics research, not only in terms of patterns of inheritance at the level of the chromosome and the gene, but later on at the molecular level, in terms of DNA and protein structure and function. ...
... rather than the normal red eyes. Drosophila quickly became one of the most important organisms used in genetics research, not only in terms of patterns of inheritance at the level of the chromosome and the gene, but later on at the molecular level, in terms of DNA and protein structure and function. ...
Introducing:
... gene map. It is called a map because it shows where the genes are located down the chromosome. Genes have numbers and letters that make up their names. •You can see how any rearrangement mutations in the chromosomes can alter the order and/or function of gene. •Numerical mutations will affect the nu ...
... gene map. It is called a map because it shows where the genes are located down the chromosome. Genes have numbers and letters that make up their names. •You can see how any rearrangement mutations in the chromosomes can alter the order and/or function of gene. •Numerical mutations will affect the nu ...
Functional genomics analysis of foliar condensed tannin and
... 2002) using GeneSpring 6.2 software (Silicon Genetics, Redwood City, CA). For each experiment (between-line comparisons or within-line N effects), differentially expressed genes were selected by one-way analysis of variance (ANOVA) with multiple-testing correction at a false discovery rate of P = 0. ...
... 2002) using GeneSpring 6.2 software (Silicon Genetics, Redwood City, CA). For each experiment (between-line comparisons or within-line N effects), differentially expressed genes were selected by one-way analysis of variance (ANOVA) with multiple-testing correction at a false discovery rate of P = 0. ...
Constraints for genetic association studies
... data. It should be pointed out that this locus was not detected in 1233 families collected by an international consortium (25). The reasons for the discrepancies in the prostate cancer linkage results are not known, but one of them may be the genetic homogeneity of the Icelandic population. Our data ...
... data. It should be pointed out that this locus was not detected in 1233 families collected by an international consortium (25). The reasons for the discrepancies in the prostate cancer linkage results are not known, but one of them may be the genetic homogeneity of the Icelandic population. Our data ...
Phylogenetic Tree Construction using Pathway Analysis
... Pool of orthologs in the N organisms is generated by BLAST Analysis of pool of ortholog generated vector representing each organisms Distance calculation from vectors Hierarchical Clustering Tree Construction ...
... Pool of orthologs in the N organisms is generated by BLAST Analysis of pool of ortholog generated vector representing each organisms Distance calculation from vectors Hierarchical Clustering Tree Construction ...
The plots show the decay of LD (y-axis) with physical
... (white-white or black-black) represent functional mitonuclear interactions, mismatching colours (white-black) represent mitonuclear incompatibilities. Each panel represent a stage in EYR evolutionary history. (A) Initial differentiation with gene flow between northern and southern populations as des ...
... (white-white or black-black) represent functional mitonuclear interactions, mismatching colours (white-black) represent mitonuclear incompatibilities. Each panel represent a stage in EYR evolutionary history. (A) Initial differentiation with gene flow between northern and southern populations as des ...
A novel atlas of gene expression in human skeletal
... to study the effect of aging on gene expression, i.e., 211 arrays from the HG-133A array and 150 from the HGU133 + 2 array that had specific annotation of age and gender, ranging from <1 year up to 83-year-old individuals (Figure S2 in Additional file 1). Using a linear model with sex and study ID a ...
... to study the effect of aging on gene expression, i.e., 211 arrays from the HG-133A array and 150 from the HGU133 + 2 array that had specific annotation of age and gender, ranging from <1 year up to 83-year-old individuals (Figure S2 in Additional file 1). Using a linear model with sex and study ID a ...
Supplementary Material (maizecyc tutorial)
... threshold. The first option is self-explanatory. In the second option, the data values over the maximum cutoff are displayed in red, and the rest in the full color spectrum. In the third option, three colors are used. By default it uses red if data values are greater than the threshold, purple if da ...
... threshold. The first option is self-explanatory. In the second option, the data values over the maximum cutoff are displayed in red, and the rest in the full color spectrum. In the third option, three colors are used. By default it uses red if data values are greater than the threshold, purple if da ...
Divergent Evolutionary and Expression Patterns between Lineage
... estimate empirical distribution. We then compared Tajima’s D, Fu and Li’s D and F for each NDG or its parental gene to the empirical distribution from this large data set. If the Tajimas’s D, Fu and Li’s D and F were negative, we computed the ‘p’ value as Proportionempirical(Xemp# Xobs); if those va ...
... estimate empirical distribution. We then compared Tajima’s D, Fu and Li’s D and F for each NDG or its parental gene to the empirical distribution from this large data set. If the Tajimas’s D, Fu and Li’s D and F were negative, we computed the ‘p’ value as Proportionempirical(Xemp# Xobs); if those va ...
Advanced Gene Mapping in Eukaryotes
... geneticists can infer the genotypes of each member of the tetrad directly. That is, because haploid organisms have only one copy of each gene, the phenotype is the direct result of the allele that is present. In other words, dominance and recessiveness issues do not come into play as they do in dipl ...
... geneticists can infer the genotypes of each member of the tetrad directly. That is, because haploid organisms have only one copy of each gene, the phenotype is the direct result of the allele that is present. In other words, dominance and recessiveness issues do not come into play as they do in dipl ...
3_platform
... Ensures that the cost will be the same for everyone Encourages innovation by ensuring that third parties who develop new technologies can make them compatible with the system Ensures that the price will not jump as soon as the contract is signed Ensures that clones can be distributed by multiple dis ...
... Ensures that the cost will be the same for everyone Encourages innovation by ensuring that third parties who develop new technologies can make them compatible with the system Ensures that the price will not jump as soon as the contract is signed Ensures that clones can be distributed by multiple dis ...
knockdown
... No G/C at position 19 (sense) - Subtract 1 point for not satisfying this criterion. No G at position 13 (sense) - Subtract 1 point for not satisfying this criterion. ...
... No G/C at position 19 (sense) - Subtract 1 point for not satisfying this criterion. No G at position 13 (sense) - Subtract 1 point for not satisfying this criterion. ...
Analysis of Tetrads from the yeast Saccaromyces
... Analysis of Tetrads from the yeast Saccaromyces cerevisiae When normally haploid yeast cells of two different mating types encounter each other, they fuse to form a diploid zygote (this constitutes a cross), which immediately undergoes meiosis to regenerate four individual haploid spores – a tetrad ...
... Analysis of Tetrads from the yeast Saccaromyces cerevisiae When normally haploid yeast cells of two different mating types encounter each other, they fuse to form a diploid zygote (this constitutes a cross), which immediately undergoes meiosis to regenerate four individual haploid spores – a tetrad ...
Pathway and Gene Set Analysis of Microarray Data
... ranked gene list (competitive) Typically that statistic (“enrichment score”) is tested by permuting/reshuffling the group labels ...
... ranked gene list (competitive) Typically that statistic (“enrichment score”) is tested by permuting/reshuffling the group labels ...
No more than 14: the end of the amphioxus Hox cluster
... amphioxus cluster surprisingly showed the presence not only of 13 Hox genes, but a 14th Hox gene, AmphiHox14 [7]. The lack of a Hox14 gene in vertebrate Hox clusters and the faster rate of sequence divergence of the posterior class of Hox genes (so-called “posterior flexibility”) had made it difficu ...
... amphioxus cluster surprisingly showed the presence not only of 13 Hox genes, but a 14th Hox gene, AmphiHox14 [7]. The lack of a Hox14 gene in vertebrate Hox clusters and the faster rate of sequence divergence of the posterior class of Hox genes (so-called “posterior flexibility”) had made it difficu ...
Gene finding: putting the parts together
... Any isolated signal of a gene is hard to predict. Current methods for promoter prediction, for instance, will have either a very low specificity or a very bad sensitivity, such that they will either predict a huge number of false positives (fake promoters) or a very small number of true promoters. T ...
... Any isolated signal of a gene is hard to predict. Current methods for promoter prediction, for instance, will have either a very low specificity or a very bad sensitivity, such that they will either predict a huge number of false positives (fake promoters) or a very small number of true promoters. T ...