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Leukaemia Section t(X;11)(q21;q23) Atlas of Genetics and Cytogenetics in Oncology and Haematology
Leukaemia Section t(X;11)(q21;q23) Atlas of Genetics and Cytogenetics in Oncology and Haematology

... Dual-color interphase FISH analysis of the 11q23 and Xq21 breakpoints with BAC clones. (A) FISH analysis with 11q23 specific BACs: RP11-468P24 (red signals) and RP11-206G12 (green signals). Three red signals indicate translocation within the genomic region represented by RP11-468P24. (B) FISH analys ...
2015.04.09.UMinn Resurgence of Ref Quality Genomes
2015.04.09.UMinn Resurgence of Ref Quality Genomes

... •  Less than 1% of exonic bases missing •  Genome-specific genes enriched for disease resistance •  Reflects their geographic and environmental diversity •  Assemblies fragmented at (high copy) repeats •  Difficult to identify full length gene models and regulatory features ...
Chapter 11: Introduction to Genetics
Chapter 11: Introduction to Genetics

... • Mendel's experimental results were very close to the 9 : 3 : 3 : 1 ratio that the Punnett square shown below predicts. • The principle of independent assortment states that genes for different traits can segregate independently during the formation of gametes. • Independent assortment helps accou ...
Heredity and Prenatal Development
Heredity and Prenatal Development

... • Heredity defines our nature. – It is based on the biological transmission of physical and psychological traits from generation to generation. ...
Document
Document

... homozygous dominant----------> TT heterozygous (a hybrid--a mix)---> Tt homozygous recessive----------> tt  recessive phenotypes can only be expressed (show up) when there are 2 copies of a recessive gene present at the same time...if a dominant gene was there, then that would be expressed, hiding ...
Exploring Data using Dimension Reduction and Clustering
Exploring Data using Dimension Reduction and Clustering

... We might compute an adjusted p-value, or goodness-offit statistic to select genes based on the fit to a pattern. If we have many "conditions" we do not need to replicate as much as in differential expression analysis because we consider any deviation from the "pattern" to be random variation. ...
Supplementary Figures
Supplementary Figures

... (a) Histogram bars represent the number of lincRNAs covered at certain proportions by TEs. 1,531 (17%) of 9,241 lincRNAs are completely devoid of TEs, but most contain some TE sequence—33% is the median TE coverage of lincRNA transcripts. Plotted in red on the right is the median lincRNA length in e ...
portable document (.pdf) format
portable document (.pdf) format

... “Oncogene outliers” are those genes which show systematically increased expressions in disease samples, but only for a small number of cancer samples. Since the discovery of the existence of oncogenes, several proposals have been made for detecting differentially expressed (DE) genes in two-class mi ...
Human chromosome 21/Down syndrome gene function and
Human chromosome 21/Down syndrome gene function and

... NNP1. From C. elegans and yeast, the interactomes contain data on novel interactions of numerous chromosome 21 orthologs (Tong et al., 2004; Li et al., 2004). While phenotypes of knockouts do not imply the phenotype of overexpression and conservation from C. elegans to human of interaction networks ...
Topic 10: Genetics (HL)
Topic 10: Genetics (HL)

... 10.2.2 Distinguish between autosomes and sex chromosomes 10.2.3 Explain how crossing over between non-sister chromatids of a homologous pair in prophase I can result in an exchange of the alleles ...
The Price of Silent Mutations
The Price of Silent Mutations

... genes that speed up protein manufacture, but the same technique can also be used mRNA might not fold properly. Contrary to to slow it down. Steffen Mueller and his colleagues at Stony Brook University recently what is sometimes (for simplicity) depicted in took this approach to design a safer polio ...
cDNA Sequences of Three Kinds of /3
cDNA Sequences of Three Kinds of /3

... japonica c.v. Nipponbare and Oryza sativa indica c.v. Kasalath using green leaves.13 DNA (5 /xg) was digested with each of four kinds of restriction enzymes and transferred onto a nylon membrane. RNA was prepared from root, callus, green and etiolated shoot according to Hattori et al. 14 Poly(A) + R ...
Mammalian X Chromosome Inactivation
Mammalian X Chromosome Inactivation

... Rarely do fetuses go to term. Rarely do babies survive. Symptoms include: ...
adrian2004_1acbPosterDataAnalysis34by51
adrian2004_1acbPosterDataAnalysis34by51

... patients. A web form is used to retrieve microarray data form the DORA database. In the resulting Excel file (Figure 1), each column holds gene expression data for a patient and each row holds gene expression data for a gene. Each column is headed by a patient ID. Each row is headed by a gene title ...
An interspecific plant hybrid shows novel changes in
An interspecific plant hybrid shows novel changes in

... (Valencia, CA) Qiaquick PCR purification kit, cloned them with pCR2.1-TOPO vector (Invitrogen), following the manufacturer’s protocol, and sequenced them using Big Dye Terminator v3.1 (Applied Biosystems) sequencing chemistry. We aligned the obtained sequences against the corresponding genomic DNA u ...
Slcyt, a Newly Identified Sex-Linked Gene, Has
Slcyt, a Newly Identified Sex-Linked Gene, Has

... generally accepted that no additions to this sex chromosome pair had occurred during its evolution, but that it evolved from a single ancestral autosome that can be identified by its gene content (Filatov 2005), but these new results show that at least part of the X near the PAR has recently been ad ...
The Pleiotropy Problem for Evolution
The Pleiotropy Problem for Evolution

... are redundant (meaning different cytokines may have the same effect) and yet can have multiple effects on the same cell in different circumstances. This fact again illustrates that single mutations, although beneficial, often have a wide variety of results, some quite negative, on other systems. A si ...
Zoo/Bot 3333
Zoo/Bot 3333

... 8. True or false. Suppose after mixing strains 2 and 7 the culture was left to grow on medium containing the nutrients needed by the a- and b- mutants. Virtually all of the progenitor cells arising from the mixture would be expected to have pili if examined under the electron microscope. Five interr ...
Genetics Spring 2008 Exam 1 Wolf Notes: Below are the correct
Genetics Spring 2008 Exam 1 Wolf Notes: Below are the correct

... A. Segregation of sister chromatids at anaphase II of meiosis. B. Segregation of homologous chromosomes at anaphase I of meiosis. C. Crossing over between homologous chromosomes during prophase I of meiosis. D. Independent alignment of different homologous pairs on the metaphase I spindle. E. Both c ...
Final Exam Practice 2017- Written responses (FRQ)
Final Exam Practice 2017- Written responses (FRQ)

... 1) Explain based on genotypes/phenotypes what is the chance for them of having another child with CF (punnett square)? 2) Compare the probability of their offspring to the actual offspring they have. Be sure to address all possible genotypes/phenotypes in your comparison. 3) Does the sex of the chil ...
Teacher Guide
Teacher Guide

... c) Ask the students how well they think the rabbits will survive at different temperatures. Ask them to hypothesize how mutations will affect this survival.  Make sure to note that the mutations occur during reproduction, so they can only affect survival of the species and not of individual rabbits ...
Practice - Long Free Response Question Honors Biology Cystic
Practice - Long Free Response Question Honors Biology Cystic

AP Chapter 14-15 Study Guide: Chromosomes and Mendelian
AP Chapter 14-15 Study Guide: Chromosomes and Mendelian

... Morgan’s Drosophila studies showed that some genes are linked more tightly than others. The frequency of recombination for cn, cinnabar eye color and body color is 9% A.H. Sturtevant ( a student of Morgan’s) determined that the probability of crossover is proportional. That is, the closer two genes ...
GENE 760 -‐ Problem Set #3
GENE 760 -‐ Problem Set #3

... RPKM:  Reads  Per  Kilobase  of  transcript  per  Million  mapped  reads   FPKM:  Fragments  Per  Kilobase  of  transcript  per  Million  mapped  fragments   In  a  paired-­‐end  sequencing  experiment,  the  sequencer  will  output  two  r ...
Species tree
Species tree

... • “supertree” The supertree approach estimates phylogenies for subsets of genes with good overlap, then combines these subtree estimates into a supertree. • Depends on the ability to distinguish between orthologs and paralogs; • Supertree approaches are controversial, in part because the methodology ...
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Minimal genome

The concept of minimal genome assumes that genomes can be reduced to a bare minimum, given that they contain many non-essential genes of limited or situational importance to the organism. Therefore, if a collection of all the essential genes were put together, a minimum genome could be created artificially in a stable environment. By adding more genes, the creation of an organism of desired properties is possible. The concept of minimal genome arose from the observations that many genes do not appear to be necessary for survival. In order to create a new organism a scientist must determine the minimal set of genes required for metabolism and replication. This can be achieved by experimental and computational analysis of the biochemical pathways needed to carry out basic metabolism and reproduction. A good model for a minimal genome is Mycoplasma genitalium, the organism with the smallest known genome. Most genes that are used by this organism are usually considered essential for survival; based on this concept a minimal set of 256 genes has been proposed.
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