 
									
								
									Aequatus User Guide
									
... of a common species. Aequatus works on top of the Ensembl Compara and Core database schema. • Aequatus uses precalculated gene family information and genomic alignments data in the form of CIGAR strings, from Ensembl Compara, and cross-references these sequences to Ensembl Core databases for each sp ...
                        	... of a common species. Aequatus works on top of the Ensembl Compara and Core database schema. • Aequatus uses precalculated gene family information and genomic alignments data in the form of CIGAR strings, from Ensembl Compara, and cross-references these sequences to Ensembl Core databases for each sp ...
									Ch. 5.1 and 5.2
									
... Colorblindness is controlled by a recessive allele on the X chromosome (XcXc or XcY) If you have the Dominant NORMAL gene, you will see in color. (XCXC or XCY) If you are a girl and have one of each (XCXc) then you are a carrier. You CARRY the gene for colorblindness, but you see in color!  Because ...
                        	... Colorblindness is controlled by a recessive allele on the X chromosome (XcXc or XcY) If you have the Dominant NORMAL gene, you will see in color. (XCXC or XCY) If you are a girl and have one of each (XCXc) then you are a carrier. You CARRY the gene for colorblindness, but you see in color!  Because ...
									equal expression of both alleles
									
... A Summary of Mendel’s Principles •The inheritance of biological characteristics is determined by individual units known as genes. In organisms that reproduce sexually, genes are passed from parents to their offspring. •In cases in which two or more forms of the gene for a single trait exist, some f ...
                        	... A Summary of Mendel’s Principles •The inheritance of biological characteristics is determined by individual units known as genes. In organisms that reproduce sexually, genes are passed from parents to their offspring. •In cases in which two or more forms of the gene for a single trait exist, some f ...
									Two Epigenetic Mechanisms
									
... Refers to changes in gene expression caused by mechanisms other than changes in the underlying DNA sequence. Enables a cell/organism to respond to its dynamic external environment during development and throughout life! Epigenetic changes to the genome can be inherited if these changes occur in cell ...
                        	... Refers to changes in gene expression caused by mechanisms other than changes in the underlying DNA sequence. Enables a cell/organism to respond to its dynamic external environment during development and throughout life! Epigenetic changes to the genome can be inherited if these changes occur in cell ...
									Document
									
... of chromosomes that contain information for protein synthesis. A zygote receives twenty-three pairs of chromosomes, one of each pair from the male parent and the other of each pair from the female parent. Twenty-two of these pairs are autosomes. Autosomes are chromosomes that contain genes for the s ...
                        	... of chromosomes that contain information for protein synthesis. A zygote receives twenty-three pairs of chromosomes, one of each pair from the male parent and the other of each pair from the female parent. Twenty-two of these pairs are autosomes. Autosomes are chromosomes that contain genes for the s ...
									Ch. 7 Gene Expresion part 2
									
...  All cells in your body carry the same DNA  Some genes are transcribed by all cells, but most cells are specialized (differentiated) to use only certain genes ...
                        	...  All cells in your body carry the same DNA  Some genes are transcribed by all cells, but most cells are specialized (differentiated) to use only certain genes ...
									Mechanisms of Evolutionary Change
									
... Only the alleles of organisms that successfully reproduce in one generation appear in the gene pool of the next generation. In this population of ten plants, the frequency of white-flower alleles was reduced to zero due to genetic drift Genetic Drift ...
                        	... Only the alleles of organisms that successfully reproduce in one generation appear in the gene pool of the next generation. In this population of ten plants, the frequency of white-flower alleles was reduced to zero due to genetic drift Genetic Drift ...
									Red Line - iPlant Pods
									
... – 19 students used Red Line to visualize next-gen RNA-Seq data to investigate presence/absence variation (PAV) in maize – 12 hours effort, each student group annotated 100 kb and then imported next-gen RNA-Seq data from 5 different tissues in 30 maize inbred lines for a gene that they had previously ...
                        	... – 19 students used Red Line to visualize next-gen RNA-Seq data to investigate presence/absence variation (PAV) in maize – 12 hours effort, each student group annotated 100 kb and then imported next-gen RNA-Seq data from 5 different tissues in 30 maize inbred lines for a gene that they had previously ...
									Inheritance Principles and Human Genetics
									
... – Gene codes protein to cause gonads to develop testes ...
                        	... – Gene codes protein to cause gonads to develop testes ...
									Mendel and Genetics - Lake Stevens High School
									
... other on the same chromosome are often inherited together ◦ genes do not assort independently, so ratio of offspring varies depending on location of genes ...
                        	... other on the same chromosome are often inherited together ◦ genes do not assort independently, so ratio of offspring varies depending on location of genes ...
									Evolution - SchoolNotes
									
...  This is a situation where allele frequencies (the amount of times a trait occurs) stay the same.  In order for this to happen, the following must occur: ...
                        	...  This is a situation where allele frequencies (the amount of times a trait occurs) stay the same.  In order for this to happen, the following must occur: ...
									Computational Insights and the Theory of Evolution
									
... long string in 3 billion years?” L. G.Valiant ...
                        	... long string in 3 billion years?” L. G.Valiant ...
									Supplementary Material (doc 44K)
									
... For MCF7-LMO4-TetOff cells, we used the HG-U133A and B arrays, and for the MCF7-DNClim-TetOff cells we used the HG-U133 Plus 2.0 arrays. The two types of arrays are directly comparable because all probe sets within the HG-U133A and B arrays (44692 probe sets) are represented in the HG-U133 Plus 2.0 ...
                        	... For MCF7-LMO4-TetOff cells, we used the HG-U133A and B arrays, and for the MCF7-DNClim-TetOff cells we used the HG-U133 Plus 2.0 arrays. The two types of arrays are directly comparable because all probe sets within the HG-U133A and B arrays (44692 probe sets) are represented in the HG-U133 Plus 2.0 ...
									Chapter 16
									
...  Describe the main sources of heritable variation in a population?  Explain how is evolution defined in genetic terms.  Explain what determines the number of phenotypes for a given trait.  Describe the factors involved in the formation of new species? ...
                        	...  Describe the main sources of heritable variation in a population?  Explain how is evolution defined in genetic terms.  Explain what determines the number of phenotypes for a given trait.  Describe the factors involved in the formation of new species? ...
									Chapter 12 – Inheritance Patterns And Human Genetics
									
...  Pedigree analysis provides a pattern of inheritance within a family grouping  Phenotypes of family members are studied ...
                        	...  Pedigree analysis provides a pattern of inheritance within a family grouping  Phenotypes of family members are studied ...
									Sex-linked Traits
									
... Since the father can contribute only a Y, the mother determines if the son will have the defective alleles. ...
                        	... Since the father can contribute only a Y, the mother determines if the son will have the defective alleles. ...
									GMO and Biotechnology - Western Washington University
									
... Foreign DNA is common (via nature) in most genomes, Transgenes must be expressed in order to function, Promoters control where, when and how much protein is produced. ...
                        	... Foreign DNA is common (via nature) in most genomes, Transgenes must be expressed in order to function, Promoters control where, when and how much protein is produced. ...
									Gene regulation
									
... • It is thought to bind more than 20 different proteins • It is very sensitive to the position of the gene (nucleus) within the developing giant cell • The different concentrations of the different proteins impact on the expression of ‘Eve’ ...
                        	... • It is thought to bind more than 20 different proteins • It is very sensitive to the position of the gene (nucleus) within the developing giant cell • The different concentrations of the different proteins impact on the expression of ‘Eve’ ...
									Genetics Notes PDP - Lincoln Park High School
									
... o P (parental) generation: original true-breeding plants o F1 (1st filial) generation: offspring of P gen. o On your bellringer, predict the results in the offspring when Mendel crossed the following:  Purple flowers X White flowers  Tall plants X Short plants  Results: F1 plants were all the sam ...
                        	... o P (parental) generation: original true-breeding plants o F1 (1st filial) generation: offspring of P gen. o On your bellringer, predict the results in the offspring when Mendel crossed the following:  Purple flowers X White flowers  Tall plants X Short plants  Results: F1 plants were all the sam ...
									Additional file 7
									
... times more internal speciation nodes; in total there are 394,853 internal speciation and 115,013 internal duplication nodes). However, in the set of domain gain events that have a human representative for the gain, duplication nodes were more frequent (change in domain architecture was 1.32 times mo ...
                        	... times more internal speciation nodes; in total there are 394,853 internal speciation and 115,013 internal duplication nodes). However, in the set of domain gain events that have a human representative for the gain, duplication nodes were more frequent (change in domain architecture was 1.32 times mo ...
									doc Summer 2010 Lecture 3
									
... BIOL 202 5.5 Genetic Mapping There are a number of genes in the mtDNA - many involved with energy production - some play roles in heredity - chromosomal inheritance is 50% male and 50% female - organelle DNA: male contribution is low o random distribution—no spindle dividing it  get a segregation o ...
                        	... BIOL 202 5.5 Genetic Mapping There are a number of genes in the mtDNA - many involved with energy production - some play roles in heredity - chromosomal inheritance is 50% male and 50% female - organelle DNA: male contribution is low o random distribution—no spindle dividing it  get a segregation o ...
									Chapter 24 Genetics and Genomics Genotype and
									
... • some individuals do not express the phenotype even though they inherit the alleles (example polydactyly) Variable expression • symptoms vary in intensity in different people • two extra digits versus three extra digits in polydactyly ...
                        	... • some individuals do not express the phenotype even though they inherit the alleles (example polydactyly) Variable expression • symptoms vary in intensity in different people • two extra digits versus three extra digits in polydactyly ...
									Recostructing the Evolutionary History of Complex Human Gene
									
... understand the stochastic model how to evaluate a model? how to evaluate an algorithm? ...
                        	... understand the stochastic model how to evaluate a model? how to evaluate an algorithm? ...
 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									