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Aequatus User Guide
Aequatus User Guide

... of a common species. Aequatus works on top of the Ensembl Compara and Core database schema. • Aequatus uses precalculated gene family information and genomic alignments data in the form of CIGAR strings, from Ensembl Compara, and cross-references these sequences to Ensembl Core databases for each sp ...
Ch. 5.1 and 5.2
Ch. 5.1 and 5.2

... Colorblindness is controlled by a recessive allele on the X chromosome (XcXc or XcY) If you have the Dominant NORMAL gene, you will see in color. (XCXC or XCY) If you are a girl and have one of each (XCXc) then you are a carrier. You CARRY the gene for colorblindness, but you see in color!  Because ...
equal expression of both alleles
equal expression of both alleles

... A Summary of Mendel’s Principles •The inheritance of biological characteristics is determined by individual units known as genes. In organisms that reproduce sexually, genes are passed from parents to their offspring. •In cases in which two or more forms of the gene for a single trait exist, some f ...
Two Epigenetic Mechanisms
Two Epigenetic Mechanisms

... Refers to changes in gene expression caused by mechanisms other than changes in the underlying DNA sequence. Enables a cell/organism to respond to its dynamic external environment during development and throughout life! Epigenetic changes to the genome can be inherited if these changes occur in cell ...
Document
Document

... of chromosomes that contain information for protein synthesis. A zygote receives twenty-three pairs of chromosomes, one of each pair from the male parent and the other of each pair from the female parent. Twenty-two of these pairs are autosomes. Autosomes are chromosomes that contain genes for the s ...
CP Bio Vocabulary PowerPoint
CP Bio Vocabulary PowerPoint

Ch. 7 Gene Expresion part 2
Ch. 7 Gene Expresion part 2

...  All cells in your body carry the same DNA  Some genes are transcribed by all cells, but most cells are specialized (differentiated) to use only certain genes ...
Mechanisms of Evolutionary Change
Mechanisms of Evolutionary Change

... Only the alleles of organisms that successfully reproduce in one generation appear in the gene pool of the next generation. In this population of ten plants, the frequency of white-flower alleles was reduced to zero due to genetic drift Genetic Drift ...
Red Line - iPlant Pods
Red Line - iPlant Pods

... – 19 students used Red Line to visualize next-gen RNA-Seq data to investigate presence/absence variation (PAV) in maize – 12 hours effort, each student group annotated 100 kb and then imported next-gen RNA-Seq data from 5 different tissues in 30 maize inbred lines for a gene that they had previously ...
Inheritance Principles and Human Genetics
Inheritance Principles and Human Genetics

... – Gene codes protein to cause gonads to develop testes ...
Mendel and Genetics - Lake Stevens High School
Mendel and Genetics - Lake Stevens High School

... other on the same chromosome are often inherited together ◦ genes do not assort independently, so ratio of offspring varies depending on location of genes ...
Evolution - SchoolNotes
Evolution - SchoolNotes

...  This is a situation where allele frequencies (the amount of times a trait occurs) stay the same.  In order for this to happen, the following must occur: ...
Computational Insights and the Theory of Evolution
Computational Insights and the Theory of Evolution

... long string in 3 billion years?” L. G.Valiant ...
Supplementary Material (doc 44K)
Supplementary Material (doc 44K)

... For MCF7-LMO4-TetOff cells, we used the HG-U133A and B arrays, and for the MCF7-DNClim-TetOff cells we used the HG-U133 Plus 2.0 arrays. The two types of arrays are directly comparable because all probe sets within the HG-U133A and B arrays (44692 probe sets) are represented in the HG-U133 Plus 2.0 ...
Chapter 16
Chapter 16

...  Describe the main sources of heritable variation in a population?  Explain how is evolution defined in genetic terms.  Explain what determines the number of phenotypes for a given trait.  Describe the factors involved in the formation of new species? ...
Chapter 12 – Inheritance Patterns And Human Genetics
Chapter 12 – Inheritance Patterns And Human Genetics

...  Pedigree analysis provides a pattern of inheritance within a family grouping  Phenotypes of family members are studied ...
Sex-linked Traits
Sex-linked Traits

... Since the father can contribute only a Y, the mother determines if the son will have the defective alleles. ...
GMO and Biotechnology - Western Washington University
GMO and Biotechnology - Western Washington University

... Foreign DNA is common (via nature) in most genomes, Transgenes must be expressed in order to function, Promoters control where, when and how much protein is produced. ...
No Slide Title
No Slide Title

... Huntington’s Disease ...
Gene regulation
Gene regulation

... • It is thought to bind more than 20 different proteins • It is very sensitive to the position of the gene (nucleus) within the developing giant cell • The different concentrations of the different proteins impact on the expression of ‘Eve’ ...
Genetics Notes PDP - Lincoln Park High School
Genetics Notes PDP - Lincoln Park High School

... o P (parental) generation: original true-breeding plants o F1 (1st filial) generation: offspring of P gen. o On your bellringer, predict the results in the offspring when Mendel crossed the following:  Purple flowers X White flowers  Tall plants X Short plants  Results: F1 plants were all the sam ...
Additional file 7
Additional file 7

... times more internal speciation nodes; in total there are 394,853 internal speciation and 115,013 internal duplication nodes). However, in the set of domain gain events that have a human representative for the gain, duplication nodes were more frequent (change in domain architecture was 1.32 times mo ...
doc Summer 2010 Lecture 3
doc Summer 2010 Lecture 3

... BIOL 202 5.5 Genetic Mapping There are a number of genes in the mtDNA - many involved with energy production - some play roles in heredity - chromosomal inheritance is 50% male and 50% female - organelle DNA: male contribution is low o random distribution—no spindle dividing it  get a segregation o ...
Chapter 24 Genetics and Genomics Genotype and
Chapter 24 Genetics and Genomics Genotype and

... •  some individuals do not express the phenotype even though they inherit the alleles (example polydactyly) Variable expression •  symptoms vary in intensity in different people •  two extra digits versus three extra digits in polydactyly ...
Recostructing the Evolutionary History of Complex Human Gene
Recostructing the Evolutionary History of Complex Human Gene

... understand the stochastic model how to evaluate a model? how to evaluate an algorithm? ...
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Gene expression programming

In computer programming, gene expression programming (GEP) is an evolutionary algorithm that creates computer programs or models. These computer programs are complex tree structures that learn and adapt by changing their sizes, shapes, and composition, much like a living organism. And like living organisms, the computer programs of GEP are also encoded in simple linear chromosomes of fixed length. Thus, GEP is a genotype-phenotype system, benefiting from a simple genome to keep and transmit the genetic information and a complex phenotype to explore the environment and adapt to it.
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