The UCSC Known Genes
... While there are various different definitions of what constitutes a gene, we chose to limit our gene set to protein coding genes and require each gene be substantiated by at least a transcript (either a GenBank mRNA or a NCBI RefSeq) and a UniProt protein. We relied upon UniProt’s comprehensive cros ...
... While there are various different definitions of what constitutes a gene, we chose to limit our gene set to protein coding genes and require each gene be substantiated by at least a transcript (either a GenBank mRNA or a NCBI RefSeq) and a UniProt protein. We relied upon UniProt’s comprehensive cros ...
Pathogen Response Genes Mediate Caenorhabditis elegans Innate
... including the CUB-like gene family. It has previously been shown in C. elegans that genes from the CUB-like gene family have induced expression in the presence of bacterial pathogens (Sharpira et al. 2006). The CUB domain, named based on the first three identified proteins of the family (complement ...
... including the CUB-like gene family. It has previously been shown in C. elegans that genes from the CUB-like gene family have induced expression in the presence of bacterial pathogens (Sharpira et al. 2006). The CUB domain, named based on the first three identified proteins of the family (complement ...
Tools for Comparing Bacterial Genomes
... around 1.2 Mbp, which is strongly curved and easily melted, and is slightly more AT rich than the rest of the genome. Here, the important carbon-monoxide dehydrogenase gene locus is present, as are multiple transposases, which could be an indication of horizontally acquired DNA. The genome is relati ...
... around 1.2 Mbp, which is strongly curved and easily melted, and is slightly more AT rich than the rest of the genome. Here, the important carbon-monoxide dehydrogenase gene locus is present, as are multiple transposases, which could be an indication of horizontally acquired DNA. The genome is relati ...
Chapter 15
... Human Disorders Due to Chromosomal Alterations • Alterations of chromosome number and structure are associated with some serious disorders • Some types of aneuploidy appear to upset the genetic balance less than others, resulting in individuals surviving to birth and beyond • These surviving indivi ...
... Human Disorders Due to Chromosomal Alterations • Alterations of chromosome number and structure are associated with some serious disorders • Some types of aneuploidy appear to upset the genetic balance less than others, resulting in individuals surviving to birth and beyond • These surviving indivi ...
PowerPoint-Präsentation
... cirA*, oprG, potD and ybeJ*. The sigma factor FecI2 (PA14_27690) is commonly present in P. aeruginosa, however not in all strains e.g. it is missing in the PAO1 type strain (Potvin et al, 2008). The FecI2 regulon encompasses iron-starvation and virulence-related genes such as fecI2 itself, pchR, has ...
... cirA*, oprG, potD and ybeJ*. The sigma factor FecI2 (PA14_27690) is commonly present in P. aeruginosa, however not in all strains e.g. it is missing in the PAO1 type strain (Potvin et al, 2008). The FecI2 regulon encompasses iron-starvation and virulence-related genes such as fecI2 itself, pchR, has ...
QTL-mapping of individual resistance against American Apis mellifera
... honeybee lines are also known to differ in individual larval resistance (Palmer and Oldroyd 2003) and also the threshold of lethal infection titres has been shown to vary substantially among individual bees of the same colony (Behrens et al. 2010). Hence in order to assess any genetic variance for A ...
... honeybee lines are also known to differ in individual larval resistance (Palmer and Oldroyd 2003) and also the threshold of lethal infection titres has been shown to vary substantially among individual bees of the same colony (Behrens et al. 2010). Hence in order to assess any genetic variance for A ...
Identification of genes involved in the same
... A milestone in molecular and computational biology has been reached with the sequencing of a complete human genome, marking the beginning of the post-genomic era (Venter et al., 2001). With a wealth of genomic sequence data now available from multiple species, the main goal in molecular and computat ...
... A milestone in molecular and computational biology has been reached with the sequencing of a complete human genome, marking the beginning of the post-genomic era (Venter et al., 2001). With a wealth of genomic sequence data now available from multiple species, the main goal in molecular and computat ...
Temporal and Spatial Expression of Homeotic Genes Is Important for
... This transformation was detected even in A7 of UBX abdA double mutant embryos (Table 1). The second and/or third thoracic MM-CBG were also missing in Ubx abd-A double mutants compared to the Ubx single mutant (Table 1). Abd-B mutant embryos showed an MM-CBG transformation pattern in the A7 segment ( ...
... This transformation was detected even in A7 of UBX abdA double mutant embryos (Table 1). The second and/or third thoracic MM-CBG were also missing in Ubx abd-A double mutants compared to the Ubx single mutant (Table 1). Abd-B mutant embryos showed an MM-CBG transformation pattern in the A7 segment ( ...
Molecular Biology Reports
... we grouped the sequences using the National Center for Biotechnology Information (NCBI) database. The classification was based on the best homology match of BLASTX searches against Arabidopsis and other plant protein sequences. Eleven antioxidant-related genes were found among the most abundant ESTs ...
... we grouped the sequences using the National Center for Biotechnology Information (NCBI) database. The classification was based on the best homology match of BLASTX searches against Arabidopsis and other plant protein sequences. Eleven antioxidant-related genes were found among the most abundant ESTs ...
Strong dominance of functional alleles over gene deletions in
... Table S1 shows that these factors were indeed often significant. We started by correcting for the time block and individual plate effect. We found that the upper quartile of a plate was less varying between plates that the mean or median. We therefore divided all individual MGR/MLSs by the upper qua ...
... Table S1 shows that these factors were indeed often significant. We started by correcting for the time block and individual plate effect. We found that the upper quartile of a plate was less varying between plates that the mean or median. We therefore divided all individual MGR/MLSs by the upper qua ...
Saccharopolyspora erythraea that are involved
... lying between eryAZ and eryK had an EryB phenotype. The EryC mutants, on the other hand, accumulate 3-aL-mycarosyl-erythronolide B, and convert erythromycin D (or later intermediates) to erythromycin A. These mutants cannot synthesize desosamine and/or are unable to attach it the macrolactone ring. ...
... lying between eryAZ and eryK had an EryB phenotype. The EryC mutants, on the other hand, accumulate 3-aL-mycarosyl-erythronolide B, and convert erythromycin D (or later intermediates) to erythromycin A. These mutants cannot synthesize desosamine and/or are unable to attach it the macrolactone ring. ...
Functional significance of the discordance between
... mice following transaortic constriction (TAC). These effects were no longer observed following TAC in tTA-TRAF2dox8W, wherein there was a more complete (88%) reversal of the incident HF genes. These results demonstrate that reverse LV remodeling is associated with improvements in cardiac myocyte bio ...
... mice following transaortic constriction (TAC). These effects were no longer observed following TAC in tTA-TRAF2dox8W, wherein there was a more complete (88%) reversal of the incident HF genes. These results demonstrate that reverse LV remodeling is associated with improvements in cardiac myocyte bio ...
Correlation between sequence divergence and polymorphism
... By visualizing the remaining contigs in Consed v21 [21] and using information regarding reads that span multiple contigs, 63 of the initial contigs were reassembled into nine final contigs with a total length of 147.3 kb and an average single copy coverage depth of 20×. For the ccsA gene, PCR and Sa ...
... By visualizing the remaining contigs in Consed v21 [21] and using information regarding reads that span multiple contigs, 63 of the initial contigs were reassembled into nine final contigs with a total length of 147.3 kb and an average single copy coverage depth of 20×. For the ccsA gene, PCR and Sa ...
PDF
... Polyploidy is a fundamental process in plant evolution. Understanding the polyploidy-associated effects on plant reproduction is essential for polyploid breeding program. In the present study, our cytological analysis firstly demonstrated that an overall course of meiosis was apparently distorted in ...
... Polyploidy is a fundamental process in plant evolution. Understanding the polyploidy-associated effects on plant reproduction is essential for polyploid breeding program. In the present study, our cytological analysis firstly demonstrated that an overall course of meiosis was apparently distorted in ...
Combined expression patterns of QTL
... line or treatment were analyzed with qRT-PCR and results are presented as relative mean expression levels SE. Variation in gene expression levels was tested with two-way ANOVAs for each gene, using RIL and heat-hardening treatment as fixed factors. Expression levels were further analyzed by computin ...
... line or treatment were analyzed with qRT-PCR and results are presented as relative mean expression levels SE. Variation in gene expression levels was tested with two-way ANOVAs for each gene, using RIL and heat-hardening treatment as fixed factors. Expression levels were further analyzed by computin ...
Mapping avirulence genes in the rice blast fungus Magnaporthe grisea
... cultivar race specificity and its variability. Breeding for resistance has shown that a large number of rice cultivars have major genes conferring complete resistance towards specific races of the rice blast fungus (Ou 1985, Kiyosawa et al., 1986). This cultivar specificity is controlled on the path ...
... cultivar race specificity and its variability. Breeding for resistance has shown that a large number of rice cultivars have major genes conferring complete resistance towards specific races of the rice blast fungus (Ou 1985, Kiyosawa et al., 1986). This cultivar specificity is controlled on the path ...
Set - people.vcu.edu
... If this were a complicated search, you might want to save the specifications as a script. In this case, just save the results by clicking on Save only results. ...
... If this were a complicated search, you might want to save the specifications as a script. In this case, just save the results by clicking on Save only results. ...
Evolutionary analysis of the female
... substitution rate, dS, 0.262±0.024), although we notice that there was considerable overlap in dS estimates at the level of individual genes between the two categories (Supplementary Table 5). Because of the latter, we suggest that it may be more difficult than previously acknowledged to assign indiv ...
... substitution rate, dS, 0.262±0.024), although we notice that there was considerable overlap in dS estimates at the level of individual genes between the two categories (Supplementary Table 5). Because of the latter, we suggest that it may be more difficult than previously acknowledged to assign indiv ...
Gene expression patterns in human placenta
... expression patterns might be linked to important abnormalities in maternal or fetal health, or even variations in later life, warrants investigation. As an initial step, we used DNA microarrays to analyze gene expression patterns in 72 samples of amnion, chorion, umbilical cord, and sections of vill ...
... expression patterns might be linked to important abnormalities in maternal or fetal health, or even variations in later life, warrants investigation. As an initial step, we used DNA microarrays to analyze gene expression patterns in 72 samples of amnion, chorion, umbilical cord, and sections of vill ...
Genome-Wide Analysis of Core Cell Cycle Genes in
... Nevertheless, a genome-wide inventory of all core cell cycle genes is possible only when the available raw sequence data are annotated correctly. Although genome-wide annotations of organisms sequenced by large consortia have produced huge amounts of information that benefits the scientific communit ...
... Nevertheless, a genome-wide inventory of all core cell cycle genes is possible only when the available raw sequence data are annotated correctly. Although genome-wide annotations of organisms sequenced by large consortia have produced huge amounts of information that benefits the scientific communit ...
Genes@ Work: an efficient algorithm for pattern discovery and
... (who define ‘plaid’ models that describe the gene expression matrix as a linear function of their bicluster parameters) and Bergmann et al. (2003) (who iteratively refine sets of genes and conditions until they match the definition of a special kind of bicluster that they call transcription modules) ...
... (who define ‘plaid’ models that describe the gene expression matrix as a linear function of their bicluster parameters) and Bergmann et al. (2003) (who iteratively refine sets of genes and conditions until they match the definition of a special kind of bicluster that they call transcription modules) ...
Inheritance of Color And The Polled Trait
... what appears to be scurs at weaning may develop into horns by 15 months of age or even later, particularly with heifers. When this happens, the animal must be reclassified as horned. The breeder who wants to be positive about the horned, polled, or scurred status of his Simmentals should continue to ...
... what appears to be scurs at weaning may develop into horns by 15 months of age or even later, particularly with heifers. When this happens, the animal must be reclassified as horned. The breeder who wants to be positive about the horned, polled, or scurred status of his Simmentals should continue to ...
Essential gene
Essential genes are those genes of an organism that are thought to be critical for its survival. However, being essential is highly dependent on the circumstances in which an organism lives. For instance, a gene required to digest starch is only essential if starch is the only source of energy. Recently, systematic attempts have been made to identify those genes that are absolutely required to maintain life, provided that all nutrients are available. Such experiments have led to the conclusion that the absolutely required number of genes for bacteria is on the order of about 250-300. These essential genes encode proteins to maintain a central metabolism, replicate DNA, translate genes into proteins, maintain a basic cellular structure, and mediate transport processes into and out of the cell. Most genes are not essential but convey selective advantages and increased fitness.