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Lecture 6 The connection between genes, proteins and metabolism
Lecture 6 The connection between genes, proteins and metabolism

... -  can’t grow if supplied with the ornithine -  but can grow if they are supplied with citrulline or arginine -  therefore the enzymatic block must be in the enzymatic step that converts ornithine citrulline ...
Section 7.1 DNA Cloning with Plasmid Vectors
Section 7.1 DNA Cloning with Plasmid Vectors

... from living organisms are. For example, the 57-bp polylinker sequence shown in Figure 7-8 was chemically synthesized and then inserted into plasmid vectors to facilitate the cloning of fragments generated by different restriction enzymes. This example illustrates the use of synthetic DNAs to add con ...
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Document

... • Biologists often want to find known sequences that are similar to a newly obtained sequence – How to rapidly compare the new sequence to the hundreds of billions of bases already ...
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1 LIFE SCIENCES PAPER 1 SEPTEMBER 2008 LIFE SCIENCES

... Different sequences of bases code for different proteins. Although the base sequence AGT codes for serine, other sequences may also code for this same amino acid. There are four sequences which code for the amino acid glycine; these are CCA, CCC, CCG and CCT. There are also four base sequences codin ...
A Recipe for Traits - Learn Genetics (Utah)
A Recipe for Traits - Learn Genetics (Utah)

... • In this activity, a single gene determined each dog trait. More often a trait is influenced by more than one ...
Mutagenesis identifies the critical amino acid residues of human
Mutagenesis identifies the critical amino acid residues of human

... BamH I and EcoR I sites of histidine-tagged expression vector pET-28c(+) (Novagen, Madison, WI, USA) to create the pET-EndoG. The plasmid DNA created in this study was confirmed as an in-frame construction by sequencing. Expression and purification of recombinant human EndoG Recombinant human EndoG ...
Chapter 21 (Part 2)
Chapter 21 (Part 2)

... Zn fingers form a folded beta strand and an alpha helix that fits into the DNA major groove. ...
Genetic regulation in eukaryotes
Genetic regulation in eukaryotes

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... A common application is separation of proteins, which is achieved by setting the pH of the solution at the critical value of the protein we want to separate and applying an electric field. Varying pH and measuring the electrophoretic mobility, one can determine the critical pH value precisely. A fam ...
DNA WebQuest NAME___________________________ Topic
DNA WebQuest NAME___________________________ Topic

... G. Go to: http://nobelprize.org/educational_games/medicine/dna_double_helix/ Click on “Play DNA Game”; Click “next” and reading each page, continue to click next until you come to the game.; Click on organism #1 and match the base pairs as fast as you can! It is hard. Click Next and then click on ea ...
No Slide Title
No Slide Title

... transfect up to 50% of recombinant molecules into host (cf < 0.01% for transformation) 2) viruses are very good at forcing hosts to replicate them may not need a selectable marker ...
DNA WebQuest - Airport High School
DNA WebQuest - Airport High School

magnetic waves enable cell communication.
magnetic waves enable cell communication.

... complex relationships. The characteristics of the potential vortex are significant. With its concentration effect, it provides for miniaturization down to a few nanometers, which allows enormously high information density in the nucleus. With this first introduction of the magnetic scalar wave, it b ...
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Chapter 2 Atoms Subatomic particles of atoms

... sheets and helices • Tertiary – the 3-D shape of the entire protein in space • Quaternary – combination of more than one polypeptide • All proteins have primary, secondary and tertiary structure, while only a few have quaternary structure ...
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... 70. . In humans, hemophilia is a sex linked trait. Females can be normal, carriers, or have the disease. Males will either have the disease or not (but they won’t ever be carriers) ...
AP & Regents Biology
AP & Regents Biology

...  Use the Web to research other “allele specific” genotyping methods ligase chain reaction  primer extension  TaqMan ...
Exam 3 Fa08
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... 25. A female Drosophila (fly) was crossed with a white-eyed male fly. The genotype of the male fly was XwY (w = white eye allele that is recessive, w+= red-eye allele is dominant.) Half of the male and half of the female offspring were red-eyed, and half of the male and half of the female offspring ...
Section 8.7: Mutations
Section 8.7: Mutations

... – Mutations occurring in germ cells are the underlying source of genetic variation, which is the basis for natural selection! – Mutations in the germ line affect offspringphenotype and are often very harmful. – Typically the phenotypes that result are less adaptive, though not always. ...
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... lag transformants in the absence of selection pressure. The number of colonies retaining pSA3 and p./Rl was determined by the percentage of Era' bacteria (both plasmids contain an Era' gene). The data revealed a rapid decrease in ',he E~nr of both p JR1 and pSA3 transformants which stabilized after ...
Biology 2011-2012
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... SB5b. Explain the history of life in terms of biodiversity, ancestry, and the rates of evolution. SB5d. Relate natural selection to changes in organisms. SB5e. Recognize the role of evolution to biological resistance. ...
DNA interference: DNA-induced gene silencing in the
DNA interference: DNA-induced gene silencing in the

... RNA interference is widely employed as a gene-silencing system in eukaryotes for host defence against invading nucleic acids. In response to invading double-stranded RNA (dsRNA), mRNA is degraded in sequence-specific manner. So far, however, DNA interference (DNAi) has been reported only in plants, ...
There will be a total of 8 Quizzes of 10 points each.
There will be a total of 8 Quizzes of 10 points each.

II. Types of Mutations
II. Types of Mutations

... Rates of mutation A. Rate of mutation depends on the kinds of mutations 1. some are rare others are frequent 2. Some genes have “hot spots” for mutations. B. Do mutations arise by an adaptive response to a selective agent (acquired immunity) or are mutations spontaneously and continuously occurring ...
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Chromosomal Mutations

... Chromosomal Mutations - Translocation • Part of 1 chromosome breaks off & attaches to ...
SURVEY OF BIOCHEMISTRY - Georgia Institute of Technology
SURVEY OF BIOCHEMISTRY - Georgia Institute of Technology

... GAP Dehydrogenase Mechanism Phosphate Binding Pi ...
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Deoxyribozyme



Deoxyribozymes, also called DNA enzymes, DNAzymes, or catalytic DNA, are DNA oligonucleotides that are capable of catalyzing specific chemical reactions, similar to the action of other biological enzymes, such as proteins or ribozymes (enzymes composed of RNA).However, in contrast to the abundance of protein enzymes in biological systems and the discovery of biological ribozymes in the 1980s,there are no known naturally occurring deoxyribozymes.Deoxyribozymes should not be confused with DNA aptamers which are oligonucleotides that selectively bind a target ligand, but do not catalyze a subsequent chemical reaction.With the exception of ribozymes, nucleic acid molecules within cells primarily serve as storage of genetic information due to its ability to form complementary base pairs, which allows for high-fidelity copying and transfer of genetic information. In contrast, nucleic acid molecules are more limited in their catalytic ability, in comparison to protein enzymes, to just three types of interactions: hydrogen bonding, pi stacking, and metal-ion coordination. This is due to the limited number of functional groups of the nucleic acid monomers: while proteins are built from up to twenty different amino acids with various functional groups, nucleic acids are built from just four chemically similar nucleobases. In addition, DNA lacks the 2'-hydroxyl group found in RNA which limits the catalytic competency of deoxyribozymes even in comparison to ribozymes.In addition to the inherent inferiority of DNA catalytic activity, the apparent lack of naturally occurring deoxyribozymes may also be due to the primarily double-stranded conformation of DNA in biological systems which would limit its physical flexibility and ability to form tertiary structures, and so would drastically limit the ability of double-stranded DNA to act as a catalyst; though there are a few known instances of biological single-stranded DNA such as multicopy single-stranded DNA (msDNA), certain viral genomes, and the replication fork formed during DNA replication. Further structural differences between DNA and RNA may also play a role in the lack of biological deoxyribozymes, such as the additional methyl group of the DNA base thymidine compared to the RNA base uracil or the tendency of DNA to adopt the B-form helix while RNA tends to adopt the A-form helix. However, it has also been shown that DNA can form structures that RNA cannot, which suggests that, though there are differences in structures that each can form, neither is inherently more or less catalytic due to their possible structural motifs.
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