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3.13 Amino acids, proteins and DNA
3.13 Amino acids, proteins and DNA

... • The primary structure folds back on itself and held together by hydrogen bonds. • The given shape looks like a ‘pleat’ with the R groups alternating up and down along the ...
Continuous and discontinuous variation
Continuous and discontinuous variation

... more commonly, these mutations are confined to a single gene and are known as gene mutations. Since DNA replication is not perfect, with an error rate of about 1 in 1012 bases, we gradually acquire more of these during our lives. Certain chemicals and radiation increase this error rate, but note tha ...
What is cell
What is cell

... markets, launch of tests and other statements that are not historical facts are "forward-looking statements" within the meaning of Section 27A of the Securities Act of 1933 and Section 21E of the Securities Exchange Act of 1934 and are based on management's current beliefs, assumptions, estimates an ...
mutation as a source of variation
mutation as a source of variation

... BIOL2007 - MUTATION AS A SOURCE OF VARIATION Genetic variation is essential for Darwin’s theory of natural selection and all genetic variation must come, ultimately, from mutations. A mutation is any hereditary change in the DNA sequence or in chromosome number, form or structure. Most mutations ari ...
5.6 Mutations
5.6 Mutations

... Characterized by relocation of groups of base pairs from one place in the genome to another.  “Jumping genes” are called Transposable ...
video slide - Independent School District 196
video slide - Independent School District 196

... A G Anticodon (a) Two-dimensional structure. The four base-paired regions and three loops are characteristic of all tRNAs, as is the base sequence of the amino acid attachment site at the 3 end. The anticodon triplet is unique to each tRNA type. (The asterisks mark bases that have been chemically m ...
OUTLINE OF GENETICS LECTURE #1 A. TERMS PHENOTYPE
OUTLINE OF GENETICS LECTURE #1 A. TERMS PHENOTYPE

... mutation rate due to proof-reading processes. When the wrong base is incorporated or when thymine dimers are formed, the cell activates a repair mechanism called excision repair. Mutants defective is this pathway show an increased sensitivity to mutagens, such as ultraviolet light. A second way a ce ...
Roles of the Amino Group of Purine Bases in the Thermodynamic
Roles of the Amino Group of Purine Bases in the Thermodynamic

... a conformation that did not alter the overall B-form of the DNA helix. These spectra were also insensitive to the salt concentration and solvent composition investigated in this study (Figure S1). The CD spectral data suggested that the differences in thermodynamic stabilities among the duplexes res ...
Simulation of Gene Splicing (Genetic Engineering
Simulation of Gene Splicing (Genetic Engineering

... "were diagnosed as being mainly the result of growth hormone deficiency. This hormone is normally produced by the pituitary gland in the brain, but in Julie's case there didn't seem to be enough of it. As a result, when her pediatrician noticed on Julie's growth chart that she was lagging behind the ...
1 From Chemical Invariance to Genetic Variability - Wiley-VCH
1 From Chemical Invariance to Genetic Variability - Wiley-VCH

... Next we note that evolutionary variability is not uniform throughout the structure of a metalloenzyme. Variability increases and invariance decreases from the (innermost) transition metal through the (inner) ligators to the (outer) ligand moieties. Hence, in the course of evolution central transitio ...
Biological Molecules
Biological Molecules

...  Other small molecules may also attached to the phosphate  Phospholipids are a major component of cell membranes. ...
Identification of C. elegans lin
Identification of C. elegans lin

... The 3' end of lin-4L was also mapped by S1 analysis. A set of S1 digestion products ranging from 42 to 46 nt was obtained (Figure 6C). The two most abundant species were 44 and 45 nt long; the 45 nt product corresponded to termination of the transcript at the C located at base pair 573 of pVTSal3 (s ...
Identification of the target DNA sequence and characterization of
Identification of the target DNA sequence and characterization of

Cell Reproduction Learning Targets 2013 File
Cell Reproduction Learning Targets 2013 File

MBG305_LS_01
MBG305_LS_01

... • All people are different • but the DNA of different people only varies for 0.2% or less • So, only up to 2 letters in 1000 are expected to be different. • Evidence in current genomics studies (Single Nucleotide Polymorphisms or SNPs) imply that • on average only 1 letter out of 1400 is different b ...
Personal Genetics: PCR Determination of PTC Tasters
Personal Genetics: PCR Determination of PTC Tasters

... c. Dispose of toothpick in biohazard trash. Do not reuse toothpick. 3. Close microcentrifuge tube and centrifuge at 1200g for 5 minutes. Carefully remove tube and look for white pellet of cheek cells at bottom of tube. Don’t worry if you don’t see cells, a small number of cells will be at the bottom ...
WORD
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... Although biotechnology has existed since ancient times, some of its most dramatic advances have come in more recent years. Modern achievements include the transferal of a specific gene from one organism to another (by means of a set of genetic engineering techniques known as transgenics); the mainte ...
Highly Efficient and Specific Multiplex PCR usingTaKaRa
Highly Efficient and Specific Multiplex PCR usingTaKaRa

Practice test 2
Practice test 2

... 3. The DNA fragment is recombined into a vector. 4. The DNA fragment to be inserted is isolated. a. 1, 2, 3, 4 c. 2, 4, 3, 1 b. 2, 3, 1, 4 d. 4, 1, 2, 3 10. The process used to separate DNA segments of different lengths is _____. a. PCR c. gene amplification b. gel electrophoresis d. all of these 11 ...
Taster Lab Student Doc PDF
Taster Lab Student Doc PDF

... c. Dispose of toothpick in biohazard trash. Do not reuse toothpick. 3. Close microcentrifuge tube and centrifuge at 1200g for 5 minutes. Carefully remove tube and look for white pellet of cheek cells at bottom of tube. Don’t worry if you don’t see cells, a small number of cells will be at the bottom ...
No Slide Title
No Slide Title

... 3-5 RNA molecules 50 proteins ...
Biological Diversity Unit Review
Biological Diversity Unit Review

... 16. What are: a. The 3 parts of a DNA molecule? i. ii. iii. b. The 4 bases? i. ii. iii. ...
Blueprint of Life - The Bored of Studies Community
Blueprint of Life - The Bored of Studies Community

... individual organisms to reproduce. The continuity of life is assured when the chemical information that defines it is passed from one generation to the next on the chromosomes. Modern molecular biology is providing opportunities to alter the information transferred from one generation to the next in ...
Nitrosation of aspartic acid, aspartame, and glycine ethylester
Nitrosation of aspartic acid, aspartame, and glycine ethylester

... Preussmann, 1986; Challis et al., 1987). However, the effect of the side chain on the preceding steps is not known. In this report, the nitrosation of amino acids and derivatives, including the artificial sweetener aspartame, is investigated in vitro in order to determine the rate of nitrosation. Th ...
The Nucleus - WordPress.com
The Nucleus - WordPress.com

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Deoxyribozyme



Deoxyribozymes, also called DNA enzymes, DNAzymes, or catalytic DNA, are DNA oligonucleotides that are capable of catalyzing specific chemical reactions, similar to the action of other biological enzymes, such as proteins or ribozymes (enzymes composed of RNA).However, in contrast to the abundance of protein enzymes in biological systems and the discovery of biological ribozymes in the 1980s,there are no known naturally occurring deoxyribozymes.Deoxyribozymes should not be confused with DNA aptamers which are oligonucleotides that selectively bind a target ligand, but do not catalyze a subsequent chemical reaction.With the exception of ribozymes, nucleic acid molecules within cells primarily serve as storage of genetic information due to its ability to form complementary base pairs, which allows for high-fidelity copying and transfer of genetic information. In contrast, nucleic acid molecules are more limited in their catalytic ability, in comparison to protein enzymes, to just three types of interactions: hydrogen bonding, pi stacking, and metal-ion coordination. This is due to the limited number of functional groups of the nucleic acid monomers: while proteins are built from up to twenty different amino acids with various functional groups, nucleic acids are built from just four chemically similar nucleobases. In addition, DNA lacks the 2'-hydroxyl group found in RNA which limits the catalytic competency of deoxyribozymes even in comparison to ribozymes.In addition to the inherent inferiority of DNA catalytic activity, the apparent lack of naturally occurring deoxyribozymes may also be due to the primarily double-stranded conformation of DNA in biological systems which would limit its physical flexibility and ability to form tertiary structures, and so would drastically limit the ability of double-stranded DNA to act as a catalyst; though there are a few known instances of biological single-stranded DNA such as multicopy single-stranded DNA (msDNA), certain viral genomes, and the replication fork formed during DNA replication. Further structural differences between DNA and RNA may also play a role in the lack of biological deoxyribozymes, such as the additional methyl group of the DNA base thymidine compared to the RNA base uracil or the tendency of DNA to adopt the B-form helix while RNA tends to adopt the A-form helix. However, it has also been shown that DNA can form structures that RNA cannot, which suggests that, though there are differences in structures that each can form, neither is inherently more or less catalytic due to their possible structural motifs.
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