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Directed evolution of a thermostable esterase L G , A
Directed evolution of a thermostable esterase L G , A

plasmid vector
plasmid vector

... which other DNAs can be inserted so that many copies of original piece of DNA can be obtained. 2. Most plasmids, as they are isolated from nature, are too large to be convenient as cloning vectors and/or often do not contain easily selectable genes that can be used to move them from one host to anot ...
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Ashley, CT, Wilkinson, KD, Reines, D and Warren, ST: FMR1 protein: Conserved RNP family domains and selective RNA binding. Science 262:563-566 (1993).
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... nM for FMRI RNA. When human fetal brain RNA wasused,an apparentKd of 39 nM wasobtained. These resultswere confinned by direct scintillation counting of bound3SS-FMRP.Substitutionof the value for the estimated Kd (5.7 nM) into the equation that described the competition data (Fig. 5A) producedan esti ...
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presentation (spanish ppt format, 4.7 MB)

... ribosomal RNAs, form the basic structure of the ribosome and catalyze protein synthesis transfer RNAs, central to protein synthesis as adaptors between mRNA and amino acids small nuclear RNAs, function in a variety of nuclear processes, including the splicing of pre-mRNA small nucleolar RNAs, used t ...
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letters Solution structure of the DNA-binding domain of MafG

... DNA-binding motifs, is found in many eukaryotic and prokaryotic transcriptional regulatory proteins. The second helix of the motif usually binds to the major groove of DNA and, therefore, is mainly involved in recognition and interaction with specific DNA sequences10. MafG(1–76) contains a similar H ...
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Text 6- Pre and Post Reading Activities Reaction Kinetics

... that means the molecules combine at a slower speed than a reaction with a high rate. Some reactions take hundreds, maybe even thousands, of years while others can happen in less than one second. The rate of reaction depends on many factors like the concentration of the reactants, particle size, temp ...
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Deoxyribozyme



Deoxyribozymes, also called DNA enzymes, DNAzymes, or catalytic DNA, are DNA oligonucleotides that are capable of catalyzing specific chemical reactions, similar to the action of other biological enzymes, such as proteins or ribozymes (enzymes composed of RNA).However, in contrast to the abundance of protein enzymes in biological systems and the discovery of biological ribozymes in the 1980s,there are no known naturally occurring deoxyribozymes.Deoxyribozymes should not be confused with DNA aptamers which are oligonucleotides that selectively bind a target ligand, but do not catalyze a subsequent chemical reaction.With the exception of ribozymes, nucleic acid molecules within cells primarily serve as storage of genetic information due to its ability to form complementary base pairs, which allows for high-fidelity copying and transfer of genetic information. In contrast, nucleic acid molecules are more limited in their catalytic ability, in comparison to protein enzymes, to just three types of interactions: hydrogen bonding, pi stacking, and metal-ion coordination. This is due to the limited number of functional groups of the nucleic acid monomers: while proteins are built from up to twenty different amino acids with various functional groups, nucleic acids are built from just four chemically similar nucleobases. In addition, DNA lacks the 2'-hydroxyl group found in RNA which limits the catalytic competency of deoxyribozymes even in comparison to ribozymes.In addition to the inherent inferiority of DNA catalytic activity, the apparent lack of naturally occurring deoxyribozymes may also be due to the primarily double-stranded conformation of DNA in biological systems which would limit its physical flexibility and ability to form tertiary structures, and so would drastically limit the ability of double-stranded DNA to act as a catalyst; though there are a few known instances of biological single-stranded DNA such as multicopy single-stranded DNA (msDNA), certain viral genomes, and the replication fork formed during DNA replication. Further structural differences between DNA and RNA may also play a role in the lack of biological deoxyribozymes, such as the additional methyl group of the DNA base thymidine compared to the RNA base uracil or the tendency of DNA to adopt the B-form helix while RNA tends to adopt the A-form helix. However, it has also been shown that DNA can form structures that RNA cannot, which suggests that, though there are differences in structures that each can form, neither is inherently more or less catalytic due to their possible structural motifs.
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