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No Slide Title
No Slide Title

... Each component has a specific function (lungs vs. heart) (nucleus of cell vs. membrane) Evolutionary change (changes made to survive) ***Organisms a lot alike at cellular and chemical level ...
What is Biochemistry?
What is Biochemistry?

... Each component has a specific function (lungs vs. heart) (nucleus of cell vs. membrane) Evolutionary change (changes made to survive) ***Organisms a lot alike at cellular and chemical level ...
The Carboxyl-Terminal Region of Protein C Is
The Carboxyl-Terminal Region of Protein C Is

... showed that the carboxyl-terminal long hydrophobic amino acids of pregnancy-specific glycoprotein (PSG) specified intracellular retention and stability.17 To investigate the effects of the carboxyl-terminal hydrophobic region of PCN on its secretion, we constructed four deletion mutants truncated at ...
Word file - UC Davis
Word file - UC Davis

... 2) You have been studying a large family of protein sequences that are highly homologous to each other. You would like to generate a substitution matrix that is specific to this family; this substitution matrix should prove useful when searching for other member of this family in large protein datab ...
pGLO lab - Fog.ccsf.edu
pGLO lab - Fog.ccsf.edu

... tRNA’s carry an amino acid at one end, and have an anticodon at the other Amino acid attachment site: Binds to a specific amino acid. ...
Humes Biology Chapter 3 Biochemistry Carbon Compounds
Humes Biology Chapter 3 Biochemistry Carbon Compounds

...  Composed of a long fatty acid chain joined to a long alcohol chain  Wax can be found on the outside of plants to prevent water loss especially through leaves  Can also be found in your ears where it prevents microorganisms from entering the ear canal o Steroids  Composed of four fused carbon ri ...
Aims of lecture
Aims of lecture

CHAPTER 4: CELLULAR METABOLISM
CHAPTER 4: CELLULAR METABOLISM

... replicates, name the enzyme required for DNA replication, and explain the significance of the ...
Chapter 4 Outline
Chapter 4 Outline

... replicates, name the enzyme required for DNA replication, and explain the significance of the ...
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... elegans exhibited a specific innate immune response against different pathogens by regulating the proteins like PDI-2, DAF-21 and EEF-2 against V. alginolyticus, P. mirabilis and P. aeruginosa respectively. Since the experimental out-comes from C. elegans were highly comparable to higher animals/mam ...
A Chemical Look at Proteins: Workhorses of the Cell
A Chemical Look at Proteins: Workhorses of the Cell

... Enzymes accelerate the biological reactions that are necessary for life to exist. Because enzymes are so important in all aspects of cell growth and division, we will examine throughout this course several enzymes and how they work. We will also focus some attention on how one might inhibit an enzym ...
Lecture 27
Lecture 27

... involved in methylation reactions. Methylation reactions catalyzed by SAM yield S-adenosylhomocysteine and a methylated acceptor molecule. S-adenosylhomocysteine is hydrolyzed to homocysteine. Homocysteine may be methylated to regenerate Met, in a B12 requiring reaction with N5-methyl-THF as the met ...
Proteins
Proteins

... attached to some of the amino acid side chains. • casein is a mixture of at least three similar proteins, which differ primarily in molecular weight and amount of phosphorus they contain (number of phosphate groups). • Casein exists in milk as the calcium salt, calcium caseinate, this salt has a com ...
A Mad Scientist`s Chemistry Presentation
A Mad Scientist`s Chemistry Presentation

... • A solution’s pH is a measure of how acidic or basic it is. • A solution with a pH below 7 is acidic. • Your stomach uses a solution of hydrochloric acid, HCL, to digest food. • A solution with a pH above 7 is basic. • A solution with a pH of 7 is neutral. Living things contain many solutions. • L ...
Structural adaptation of enzymes to low
Structural adaptation of enzymes to low

... the residue exchanges biased by statistical noise. Therefore, only the residue exchanges scored by both matrices with a significance higher than 2.0 were considered. Seven exchanges fulfill such a condition and, among these, three have a significance above 3.0 (Table III). To emphasize the residue e ...
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... pH range. Presumably, the cell is protected from damage associated with accidental lysosomal leakage because their enzymes have much lower activities at higher cellular pH values. Lysosomes also selectively degrade proteins containing the amino acid sequence, Lys-Phe-GluArg-Gln, or a closely related ...
Translation Tjian lec 26
Translation Tjian lec 26

... synthesis by an aminoacyl-tRNA synthetase enzyme is shown. As indicated, the energy of ATP hydrolysis is used to attach each amino acid to its tRNA molecule in a high-energy linkage. The amino acid is first activated through the linkage of its carboxyl group directly to an AMP moiety, forming and ad ...
The phosphatidylinositol transfer protein RdgBβ binds 14-3
The phosphatidylinositol transfer protein RdgBβ binds 14-3

... a family of lipid-binding proteins that transfer PI between membrane compartments. Originally identified as soluble proteins of approximately 35 kDa [3], the family of PITP-related proteins has subsequently grown to five members subdivided into the class I PITPs, α and β (35 kDa), and the Class II R ...
BIOLOGY (Biochemistry and Molecular and Cellular Biology
BIOLOGY (Biochemistry and Molecular and Cellular Biology

... 5. Describe how enzyme activity is regulated through second messengers and hormones. a. List common second messengers and the biochemical pathways they play a role in. Note enzymes that produce or are regulated by these second messengers. b. List common protein and peptide hormones and relate them t ...
CHAPTER 4: CELLULAR METABOLISM
CHAPTER 4: CELLULAR METABOLISM

... Define the term enzyme and discuss the general characteristics of an enzyme. Be sure to discuss the mechanism by which most enzymes function (i.e. how do they react with their substrate and cofactor/coenzyme), and explain how most enzymes are named, giving examples when applicable. ...
Chemistry, Biomolecules, and Enzymes
Chemistry, Biomolecules, and Enzymes

... From foods that are very sugary Nucleic Acids have a phosphate 5 carbon sugar and nitrogen base They make up your DNA ATP and RNA They’ve got two strands antiparallel And carry genetic info as well ...
Chapter 5.9 THE USE OF D-AMINO ACIDS IN PEPTIDE DESIGN
Chapter 5.9 THE USE OF D-AMINO ACIDS IN PEPTIDE DESIGN

... In the synthesis of analogs of biologically active peptides, it is often desirable to introduce D-amino acids into host sequences composed of L-amino acids. The site of D-amino acid insertion becomes resistant to proteolytic cleavage, thereby resulting in greater in vivo stability of such analogs [3 ...
Origin of Life
Origin of Life

... 4 amino acids were made: glycine, alanine, aspartic acid, and glutamic acid. Also some nucleotide bases and acetic acid. Other experiments that went longer or with more of a reducing atmosphere or more lightning have been shown that ALL 20 amino acids needed for life can form in this way. Does not p ...
One gene
One gene

... For example polymers of the protein actin provide structural integrity to the eukaryotic cell. Perhaps the most notable example of this comes from studies of Hemoglobin. Hemoglobin is an iron carrying protein found in the red blood cells and is responsible for transporting oxygen from the lungs to t ...
CHEMISTRY 112 - LECTURE NOTES
CHEMISTRY 112 - LECTURE NOTES

... carboxyl functional groups, and R group interactions - the polypeptide chain is released from the mRNA d) two or more polypeptides interact (quaternary structure) to form multimeric protein e) other processing may be required before protein assumes biological function(s): * separation of polypeptide ...
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Proteolysis



Proteolysis is the breakdown of proteins into smaller polypeptides or amino acids. Uncatalysed, the hydrolysis of peptide bonds is extremely slow, taking hundreds of years. Proteolysis is typically catalysed by cellular enzymes called proteases, but may also occur by intra-molecular digestion. Low pH or high temperatures can also cause proteolysis non-enzymatically.Proteolysis in organisms serves many purposes; for example, digestive enzymes break down proteins in food to provide amino acids for the organism, while proteolytic processing of a polypeptide chain after its synthesis may be necessary for the production of an active protein. It is also important in the regulation of some physiological and cellular processes, as well as preventing the accumulation of unwanted or abnormal proteins in cells. Consequently, dis-regulation of proteolysis can cause diseases, and is used in some venoms to damage their prey.Proteolysis is important as an analytical tool for studying proteins in the laboratory, as well as industrially, for example in food processing and stain removal.
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