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Self-Organizing maps - UCLA Human Genetics
Self-Organizing maps - UCLA Human Genetics

... SOM Algorithm • Prototype mj, j =1, …, K, are initialized • Each observation xi is processed one at a time to find the closest prototype mj in Euclidean distance in the p-dimensional space • All neighbors of mj, say mk, move toward xi as mk  mk + a (xi – mk) • Neighbors are all mk such that the d ...
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... B are said to be equal if A and B have the same size and corresponding elements are equal; that is A and B є Mmxn(F) and A = [aij ]; B = [bij ], with aij = bij for 1<= i <= m; 1<= j<= n. DEFINITION:(Addition of matrices) Let A = [aij ] and B =[bij] be of the same size. Then A + B is the matrix obtai ...
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... If A and B are symmetric matrices with the same size, and if k is any scalar, then: a) AT is symmetric. b) A+B and A-B are symmetric. c) kA is symmetric. Note: in general, the product of symmetric matrices is not symmetric. If A and B are matrices such that AB=BA, then we say A and B commute. The pr ...
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Matrix multiplication

In mathematics, matrix multiplication is a binary operation that takes a pair of matrices, and produces another matrix. Numbers such as the real or complex numbers can be multiplied according to elementary arithmetic. On the other hand, matrices are arrays of numbers, so there is no unique way to define ""the"" multiplication of matrices. As such, in general the term ""matrix multiplication"" refers to a number of different ways to multiply matrices. The key features of any matrix multiplication include: the number of rows and columns the original matrices have (called the ""size"", ""order"" or ""dimension""), and specifying how the entries of the matrices generate the new matrix.Like vectors, matrices of any size can be multiplied by scalars, which amounts to multiplying every entry of the matrix by the same number. Similar to the entrywise definition of adding or subtracting matrices, multiplication of two matrices of the same size can be defined by multiplying the corresponding entries, and this is known as the Hadamard product. Another definition is the Kronecker product of two matrices, to obtain a block matrix.One can form many other definitions. However, the most useful definition can be motivated by linear equations and linear transformations on vectors, which have numerous applications in applied mathematics, physics, and engineering. This definition is often called the matrix product. In words, if A is an n × m matrix and B is an m × p matrix, their matrix product AB is an n × p matrix, in which the m entries across the rows of A are multiplied with the m entries down the columns of B (the precise definition is below).This definition is not commutative, although it still retains the associative property and is distributive over entrywise addition of matrices. The identity element of the matrix product is the identity matrix (analogous to multiplying numbers by 1), and a square matrix may have an inverse matrix (analogous to the multiplicative inverse of a number). A consequence of the matrix product is determinant multiplicativity. The matrix product is an important operation in linear transformations, matrix groups, and the theory of group representations and irreps.Computing matrix products is both a central operation in many numerical algorithms and potentially time consuming, making it one of the most well-studied problems in numerical computing. Various algorithms have been devised for computing C = AB, especially for large matrices.This article will use the following notational conventions: matrices are represented by capital letters in bold, e.g. A, vectors in lowercase bold, e.g. a, and entries of vectors and matrices are italic (since they are scalars), e.g. A and a. Index notation is often the clearest way to express definitions, and is used as standard in the literature. The i, j entry of matrix A is indicated by (A)ij or Aij, whereas a numerical label (not matrix entries) on a collection of matrices is subscripted only, e.g. A1, A2, etc.
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