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Profile Documents Logout
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video slide
video slide

... (a) Cell cycle–stimulating pathway. This pathway is triggered by 1 a growth factor that binds to 2 its receptor in the plasma membrane. The signal is relayed to 3 a G protein called Ras. Like all G proteins, Ras is active when GTP is bound to it. Ras passes the signal to 4 a series of protein kinase ...
Genetica per Scienze Naturali aa 05
Genetica per Scienze Naturali aa 05

... past and subsequently sustained rearrangements and gene loss. A recent analysis of gene order information from 14 hemiascomycetes, has confirmed the hypothesis that S. cerevisiae is a degenerate polyploid. Using gene order information alone, 70% of the S. cerevisiae genome were mapped into "sister" ...
Powerpoint slides
Powerpoint slides

... The value of genome sequences lies in their annotation ...
Mutation Screening in KCNQ1, HERG, KCNE1, KCNE2 and SCN5A
Mutation Screening in KCNQ1, HERG, KCNE1, KCNE2 and SCN5A

... to result in the prolongation of the QT interval.29 Mutations in these regions can provide important insights in gene regulation and expression. However, it is currently impractical to sequence the whole gene unless there is a signal suggesting its involvement. One way to ascertain this will be to p ...
recombinant DNA - Cloudfront.net
recombinant DNA - Cloudfront.net

... – confer a particular trait such as resistance to antibiotics – So we can easily introduce our own plasmids to produce desired products ...
BCH339N_SyntheticBio_Spring2016
BCH339N_SyntheticBio_Spring2016

... Introduced unique sequences for PCR and new restriction enzyme sites Standardized telomeres Reduced size from 316,617 bp to 272,871 bp (~14% reduction) Deleted 10 tRNA genes, 21 Ty elements/LTRs, silent mating loci (only one tRNA was essential, moved to a plasmid) Removed leucine biosynthesis gene L ...
DNA/RNA
DNA/RNA

... – Chromosomal Inversions: an entire section of DNA is reversed. ...
Alternative splicing
Alternative splicing

... function in newly sequenced genomes. ...
Gene Section MAPKAPK2 (mitogen-activated protein kinase- activated protein kinase 2)
Gene Section MAPKAPK2 (mitogen-activated protein kinase- activated protein kinase 2)

... therapy, combined with corticosteroids and immunomodulatory drugs, such as thalidomide and lenalidomide. Therefore, overexpression of MAPKAPK2 could be related to MM resistance to chemotherapy. They hypothesized that inhibition of MAPKAPK2 activity could augment bortezomib cytotoxicity by down regul ...
Databases - Orly Alter`s
Databases - Orly Alter`s

... g) Compare the raster and spot image displays. Can you detect similar expression patterns in both displays? ...
Biotechnology and Recombinant DNA
Biotechnology and Recombinant DNA

... interest from its genomic source and putting it in an expression vector. Steps: 1. Obtain the gene (PCR, restriction digest) 2. Ligate it into a vector (vector = carrier piece of DNA) 3. Transform the new recombinant DNA into bacteria/cells 4. Grow up a population of transformed cells that contain t ...
Slide 1
Slide 1

... as pointers to the region of the human genome where the disease-causing problem is likely to reside. • So let’s look at melanoma – GWA studies have shown three loci . ...
Gene mutation
Gene mutation

... chromosomes, or even entire sets of chromosomes change. ...
THE G2 MICRONUCLEUS ASSAY FOR THE ANALYSIS OF IN
THE G2 MICRONUCLEUS ASSAY FOR THE ANALYSIS OF IN

cancer, genes and inherited predisposition
cancer, genes and inherited predisposition

if on the Internet, Press  on your browser to
if on the Internet, Press on your browser to

Keynote for 2008 Genomics Workshop
Keynote for 2008 Genomics Workshop

... FPP pathway ...
ChIP-seq
ChIP-seq

... • Requires good gene models • Isoforms are ignored • Which annotation to use: RefSeq, GENCODE, UCSC? ...
5.1.1 Gene Regulation, lac operon, Homeobox
5.1.1 Gene Regulation, lac operon, Homeobox

A case of paroxysmal nocturnal hemoglobinuria caused by a
A case of paroxysmal nocturnal hemoglobinuria caused by a

... and normalized this value for each sample by the total number of reads that were mapped to the target region. This normalized read count per exon was used to compute the mean and variance for the coverage per exon in all analyzed samples. Exons with a normalized coverage that was 2 standard deviatio ...
Allelic or Non-Allelic? - Association for Biology Laboratory Education
Allelic or Non-Allelic? - Association for Biology Laboratory Education

... in greater detail later in the course.) And in bacteriophages, partial diploids are produced by double infections. Consider when the two mutations arise in two separate genes as shown in Figure 1. Each mutation produces the same phenotype. Remember, each gene codes for a different protein which will ...
The Gene - Genetics
The Gene - Genetics

... major component rather than some elusive accompaniment of it which constitutes the genetic material itself.” Protein, rather than monotonous nucleic acid, is presumably the information-bearer; however, unucleic acid also exists in highly polymerized form . . . as may be very significant.” MuchofMULL ...
Company Briefing
Company Briefing

... Abstract How the experimental methods led to the conclusion This is a qualitative conceptual advance over which work? Why previous experiments have not addressed this point. ...
Reproductive Technology
Reproductive Technology

... • Sort of like Road Signs ...
Bacterial Genetics
Bacterial Genetics

... 1. Inducible system used only when error-free mechanisms of repair cannot cope with damage 2. Insert random nucleotides in place of the damaged ones 3. Error-prone ...
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Oncogenomics



Oncogenomics is a relatively new sub-field of genomics that applies high throughput technologies to characterize genes associated with cancer. Oncogenomics is synonymous with ""cancer genomics"". Cancer is a genetic disease caused by accumulation of mutations to DNA leading to unrestrained cell proliferation and neoplasm formation. The goal of oncogenomics is to identify new oncogenes or tumor suppressor genes that may provide new insights into cancer diagnosis, predicting clinical outcome of cancers, and new targets for cancer therapies. The success of targeted cancer therapies such as Gleevec, Herceptin, and Avastin raised the hope for oncogenomics to elucidate new targets for cancer treatment.Besides understanding the underlying genetic mechanisms that initiates or drives cancer progression, one of the main goals of oncogenomics is to allow for the development of personalized cancer treatment. Cancer develops due to an accumulation of mutations in DNA. These mutations accumulate randomly, and thus, different DNA mutations and mutation combinations exist between different individuals with the same type of cancer. Thus, identifying and targeting specific mutations which have occurred in an individual patient may lead to increased efficacy of cancer therapy.The completion of the Human Genome Project has greatly facilitated the field of oncogenomics and has increased the abilities of researchers to find cancer causing genes. In addition, the sequencing technologies now available for sequence generation and data analysis have been applied to the study of oncogenomics. With the amount of research conducted on cancer genomes and the accumulation of databases documenting the mutational changes, it has been predicted that the most important cancer-causing mutations, rearrangements, and altered expression levels will be cataloged and well characterized within the next decade.Cancer research may look either on the genomic level at DNA mutations, the epigenetic level at methylation or histone modification changes, the transcription level at altered levels of gene expression, or the protein level at altered levels of protein abundance and function in cancer cells. Oncogenomics focuses on the genomic, epigenomic, and transcript level alterations in cancer.
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