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b) Inheritance - iGCSE Science Courses
b) Inheritance - iGCSE Science Courses

... acids, and therefore a different protein will be made. ...
Chapter 24 PPT
Chapter 24 PPT

... bases within a gene. – Gene mutations can lead to malfunctioning proteins in cells. ...
17.1 Genes and Variation
17.1 Genes and Variation

... Dominance of an allele for a single-gene trait does not necessarily mean that the dominant phenotype will always appear with greater frequency in a given population. An example of a single-gene trait is the presence of dark bands that appear on the shells of a certain species of snails. Even though ...
Mutations Worksheet
Mutations Worksheet

... If a substitution changes the amino acid, it’s called a MISSENSE point mutation. If a substitution does not change the amino acid, it’s called a SILENT point mutation. If a substitution changes the amino acid to a “stop,” it’s called a NONSENSE point mutation. Complete the boxes below. Classify each ...
Supplementary Methods, Figure Legends, Table
Supplementary Methods, Figure Legends, Table

... mixture of two normal distributions, thereby determining high and low HORMAD1expressing tumours. ...
Microarray Services
Microarray Services

... • Carrying out gene functional analysis – Focus in pathways or other functional categorizations rather than individual genes – Different approaches exist for this: • Detect functional enrichment in the DE target list • Detect functional enrichment towards the top of the list when all array targets h ...
CTEGD Symposium, UGA, Athens, May 2011
CTEGD Symposium, UGA, Athens, May 2011

... latest genomic-scale datasets including complete genome sequences, annotations, and functional genomics such as proteomics, microarray, RNA-Seq, ChIp-chip, SAGE and EST data. The specific advantage of the EuPathDB databases lies in the graphical search interface that allows users to combine datasets ...
Machine Learning in Computational Biology CSC 2431
Machine Learning in Computational Biology CSC 2431

... E.g. The Cancer Genome Atlas (TCGA) ...
embj201488049-sup-0013-Supp
embj201488049-sup-0013-Supp

NEJM G Protein Review
NEJM G Protein Review

... in the trimeric guanine nucleotide-binding proteins (G proteins), which relay signals initiated by photons, odorants, and a host of hormones and neurotransmitters, cause many diseases. For the most part, the diseases are confined to a set of fascinating but rare endocrine disorders (Table 1).1 A rec ...
A Founder Mutation in Artemis, an SNM1
A Founder Mutation in Artemis, an SNM1

... The organization of the SCIDA gene is presented in Fig. 1. Alternative splicing was observed with exons 2, 2b, 2c, 3b, and 5 in the evaluation of multiple normal tissues by RT-PCR analysis and 5⬘ RACE experiments, resulting in at least six alternatively spliced variants (GenBank accession AF395747-A ...
Clinical Case Studies
Clinical Case Studies

... expression of globin genes 2. To examine the hemoglobinopathies as disorders of hemoglobin structure, or αor β-globin gene expression 3. To explore the influences of compound heterozygosity and modifier genes on hemoglobinopathy phenotypes ...
Gene!
Gene!

Data Analysis for High-Throughput Sequencing
Data Analysis for High-Throughput Sequencing

... change together – one PC explains 95% • In most preparations the initiation site biases change by a few percent • In a few preparations the initiation site biases change by ~20%-30% • This may have consequences for representation in ChIP-Seq assays ...
Problems 10
Problems 10

... a) Define “transition mutations” and “transversion mutations.” Give one example of each. Transitions: Change from a purine to a purine or a pyrimidine to a pyrimidine. Examples: A to G; G to A; C to T; T to C Transversions: Change from a purine to a pyrimidine or vice versa. Examples: A to C or T; G ...
Lecture Presentation to accompany Principles of Life
Lecture Presentation to accompany Principles of Life

... Mutations are changes in the nucleotide sequence of DNA that are passed on from one cell, or organism, to another. Mutations occur by a variety of processes. Errors that are not corrected by repair systems are passed on to daughter cells. Mutations are of two types: Somatic mutations occur in somati ...
Ch09 Lecture-DNA and Its Role in Heredity
Ch09 Lecture-DNA and Its Role in Heredity

... Point mutations change single nucleotides. They can be due to errors in replication or to environmental mutagens. Point mutations in the coding regions of DNA usually cause changes in the mRNA, but may not affect the protein. Other mutations result in altered amino acid sequences and have drastic ph ...
Large-Scale High-Resolution Orthology Using Gene Trees
Large-Scale High-Resolution Orthology Using Gene Trees

... What is this lecture about? • What is ‘orthology’? • Why do we study gene-ancestry/gene-trees (phylogenies)? • Several approaches to find orthologous genes • High-resolution orthology • Steps involved • Things to think about (homework) ...
learning objectives
learning objectives

Fusion gene detection
Fusion gene detection

Gene Therapy: The Molecular Bandage for Treating Genetic Disorders
Gene Therapy: The Molecular Bandage for Treating Genetic Disorders

Document
Document

... quickly, making an inducible response even more economical ...
Gene Cloning
Gene Cloning

... Basic Steps in PCR 1) The mixture is heated to 94˚C, at which temperature the hydrogen bonds that hold together the two strands of the double-stranded DNA molecule are broken, causing the molecule to denature. 2) The mixture is cooled down to 50 - 60˚C. the two strands of each molecule could join ba ...
A new approach for identifying non
A new approach for identifying non

... detectability of all the C mutations can be reasonably achieved, but not a full demonstrability. In particular, mutations with a frequency 0.004
Solid Tumour Section tumors Atlas of Genetics and Cytogenetics
Solid Tumour Section tumors Atlas of Genetics and Cytogenetics

... FISH analyses have demonstrated that both homologs of chromosome 11, including the seemingly normal one, have deletions encompassing the multiple endocrine neoplasia type I, MEN1, locus and a second region about 3 Mb distal to MEN1. Angiomyo-lipoma: few cases have been investigated cytogenetically; ...
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Oncogenomics



Oncogenomics is a relatively new sub-field of genomics that applies high throughput technologies to characterize genes associated with cancer. Oncogenomics is synonymous with ""cancer genomics"". Cancer is a genetic disease caused by accumulation of mutations to DNA leading to unrestrained cell proliferation and neoplasm formation. The goal of oncogenomics is to identify new oncogenes or tumor suppressor genes that may provide new insights into cancer diagnosis, predicting clinical outcome of cancers, and new targets for cancer therapies. The success of targeted cancer therapies such as Gleevec, Herceptin, and Avastin raised the hope for oncogenomics to elucidate new targets for cancer treatment.Besides understanding the underlying genetic mechanisms that initiates or drives cancer progression, one of the main goals of oncogenomics is to allow for the development of personalized cancer treatment. Cancer develops due to an accumulation of mutations in DNA. These mutations accumulate randomly, and thus, different DNA mutations and mutation combinations exist between different individuals with the same type of cancer. Thus, identifying and targeting specific mutations which have occurred in an individual patient may lead to increased efficacy of cancer therapy.The completion of the Human Genome Project has greatly facilitated the field of oncogenomics and has increased the abilities of researchers to find cancer causing genes. In addition, the sequencing technologies now available for sequence generation and data analysis have been applied to the study of oncogenomics. With the amount of research conducted on cancer genomes and the accumulation of databases documenting the mutational changes, it has been predicted that the most important cancer-causing mutations, rearrangements, and altered expression levels will be cataloged and well characterized within the next decade.Cancer research may look either on the genomic level at DNA mutations, the epigenetic level at methylation or histone modification changes, the transcription level at altered levels of gene expression, or the protein level at altered levels of protein abundance and function in cancer cells. Oncogenomics focuses on the genomic, epigenomic, and transcript level alterations in cancer.
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