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An overview of the structures of protein-DNA complexes
An overview of the structures of protein-DNA complexes

Adaptive value of sex in microbial pathogens
Adaptive value of sex in microbial pathogens

... yeast at least 60% of spontaneous single base pair substitution and deletion mutations are caused by synthesis past DNA damages in the template strand (Stuart et al., 2000; Stuart and Glickman, 2000). In studies of lacI spontaneous mutations in different organs in transgenic mice of different ages, ...
Ch. 4. The DNA of IoT
Ch. 4. The DNA of IoT

... methods must be accommodated, implying the need for a common underlying converged core IP/MPLS (multi-protocol label switching) network. The connectivity domain enables broadband access, both wired and wireless. It also includes the transport and aggregation networks. There is no doubt that if all-I ...
The proteasomal deubiquitinating enzyme POH1 promotes the
The proteasomal deubiquitinating enzyme POH1 promotes the

... genotoxic stress. We next examined DNA-damage foci induced by irradiation (IR) and found that depletion of POH1 increased the size and intensity of Ub conjugates detected by the FK2 antibody (Figure 1C and D). These data suggest that Ub conjugates induced by DSBs may be processed through the 19S. PO ...
Recombination - CCGB | index
Recombination - CCGB | index

... information, resulting in an allele on one parental chromosome being changed to the allele from the other homologous chromosome ...
Lagging Strand Synthesis and Genomic Stability
Lagging Strand Synthesis and Genomic Stability

... to their tendency to bind proteins nonspecifically or to form hairpin or higher-ordered structure that is difficult to be processed. In this sense, any structural intermediates formed in flaps can be regarded as a special type of DNA damage. The requirement of Dna2 endonuclease and helicase activiti ...
223/AP08 - EDVOTEK
223/AP08 - EDVOTEK

... light in response. This activity, known as fluorescence, does not require any additional special substrates, gene products or cofactors to produce visible light. ...
5. Harmful mutations
5. Harmful mutations

... excision of damaged part of one DNA chain by enzyme endonuclease takes place; after that other enzyme, reparative polymeraze, catalyzes synthesis of a missing part according to the principle of complementarity and antiparallelism on the remain part of DNA. Then enzyme ligase joins free ends of a new ...
Molecular Genetics
Molecular Genetics

... Answer: A mutagen in a body cell becomes part of the of the genetic sequence in that cell and in future daughter cells. The cell may die or simply not perform its normal function. These mutations are not passed on to the next generation. When mutations occur in sex cells, they will be present in eve ...
Slide 1
Slide 1

... Answer: A mutagen in a body cell becomes part of the of the genetic sequence in that cell and in future daughter cells. The cell may die or simply not perform its normal function. These mutations are not passed on to the next generation. When mutations occur in sex cells, they will be present in eve ...
LAB 1: Scientific Method/Tools of Scientific Inquiry
LAB 1: Scientific Method/Tools of Scientific Inquiry

... to load, being sure the tip is in the liquid submerging the gel but NOT deep into the well (you don’t want to poke a hole in the gel!) 5. use a finger from your off hand to steady the micropipettor as shown in the picture and slowly depress the plunger to the first stop to expel the liquid into the ...
Beads on a string Bowater Biochem Soc Trans 2012
Beads on a string Bowater Biochem Soc Trans 2012

... chromatin remodelling factor and provided structural data for the interaction of ISW1 on a unit of two nucleosome particles and showed how ISW1 could set the spacing between adjacent nucleosomes. The data from the Richmond laboratory provide support for ATP-dependent remodelling factors as the impor ...
The retinoblastoma homolog RBR1 mediates localization of the
The retinoblastoma homolog RBR1 mediates localization of the

... BLM, over 70% of rbr1 nuclei showed more than five foci per nucleus and over 30% even more than ten foci per nucleus, compared to only 30% of wild-type nuclei with one to two foci per nucleus (Fig 4C and D). Since DNA fragmentation is also a consequence of cell death (Van Hautegem et al, 2015), we e ...
Lecture 13. Mutation
Lecture 13. Mutation

... quantitative variation at a substantial speed: without an opposition from negative selection and drift, it will essentially destroy a trait in ~300 generations, and would double the heritable variation in <100 generations. In all the cases studied, the impact of mutation on a trait mean is much larg ...
Prevention of DNA Rereplication Through a Meiotic Recombination
Prevention of DNA Rereplication Through a Meiotic Recombination

... kinase inhibitor Sic1 during meiosis can trigger extra rounds of DNA replication. When programmed DNA double-strand breaks are generated but not repaired due to absence of DMC1, a pathway involving the checkpoint gene RAD17 prevents this DNA rereplication. Further genetic analysis has now reveale ...
RNA synthesis/Transcription I Biochemistry 302
RNA synthesis/Transcription I Biochemistry 302

... • RNAP binding sequence: −70 to +30 in E. coli • DNA sequence specifying start site and basal rate of transcription – Constitutive: Specify that a gene product will be transcribed at a constant rate (e.g. genes involved in metabolic control) – Inducible or regulated: Specify transcription of certain ...
Mitochondrial DNA Mutations and Disease
Mitochondrial DNA Mutations and Disease

DNA/RNA Set - Edgerton Center
DNA/RNA Set - Edgerton Center

... ☞☞ Hand out the booklets first, without the kits. Announce to students Suggest for High School and that today they are going to model the first steps in protein synthe- above sis. “We are going to reenact how cells make proteins from DNA ...
DNA/RNA Set - MIT Edgerton Center
DNA/RNA Set - MIT Edgerton Center

... ☞☞ Hand out the booklets first, without the kits. Announce to students Suggest for High School and that today they are going to model the first steps in protein synthe- above sis. “We are going to reenact how cells make proteins from DNA ...
Gene Section FANCG  (Fanconi  anemia,  complementation  group G)
Gene Section FANCG (Fanconi anemia, complementation group G)

Genomic instability — an evolving hallmark of cancer
Genomic instability — an evolving hallmark of cancer

... and number changes over time in cancer cells compared with normal cells. Abnormal chromosome structures and numbers and abnormal mitoses associated with CIN were first visualized more than a hundred years ago1,2. Some of these chromosomal changes were seen in all cells of a tumour but others were no ...
DNA Double Strand Break Repair and its Association with Inherited
DNA Double Strand Break Repair and its Association with Inherited

Degradation of DNA damage-independently stalled RNA
Degradation of DNA damage-independently stalled RNA

... (3). Adverse growth conditions such as lack of nutrients leading to low NTP levels most likely further impair transcription elongation as mimicked by treatment with the drug 6-azauracil (6AU). RNAPII complexes stalled during transcription elongation for a prolonged time might stall irreversibly. Thu ...
1. Telomeres 2. Centromeric Repeats 3. Retrotransposons (Class I
1. Telomeres 2. Centromeric Repeats 3. Retrotransposons (Class I

How Does Replication-Associated Mutational Pressure Influence
How Does Replication-Associated Mutational Pressure Influence

... ORFs were distributed evenly on the chromosome inorg and http://smorfland. microb.uni.wroc.pl). dependently of W or C strands or leading/lagging DNA The analysis of DNA walks on W and C strands strands. Figure 1b presents the same DNA walks for T. done for the third positions in coding sequences and ...
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DNA damage theory of aging

The DNA damage theory of aging proposes that aging is a consequence of unrepaired accumulation of naturally occurring DNA damages. Damage in this context is a DNA alteration that has an abnormal structure. Although both mitochondrial and nuclear DNA damage can contribute to aging, nuclear DNA is the main subject of this analysis. Nuclear DNA damage can contribute to aging either indirectly (by increasing apoptosis or cellular senescence) or directly (by increasing cell dysfunction).In humans and other mammals, DNA damage occurs frequently and DNA repair processes have evolved to compensate. In estimates made for mice, on average approximately 1,500 to 7,000 DNA lesions occur per hour in each mouse cell, or about 36,000 to 160,000 per cell per day. In any cell some DNA damage may remain despite the action of repair processes. The accumulation of unrepaired DNA damage is more prevalent in certain types of cells, particularly in non-replicating or slowly replicating cells, such as cells in the brain, skeletal and cardiac muscle.
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