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Recombination, Bacteriophages, and Horizontal Gene Transfer
Recombination, Bacteriophages, and Horizontal Gene Transfer

... • Tra Y gene codes for the protein binds to the Ori T • Initiates the transfer of plasmid across the bridge between the two cells • Tra I Gene is a helicase responsible for the conjugation • strand-specific transesterification ...
An archaebacterial homolog of pelota, a meiotic cell division protein
An archaebacterial homolog of pelota, a meiotic cell division protein

... ancestor more recent than that shared with eubacteria [2,4]. The specific common ancestry of archaebacteria and eukaryotes implied by quantitative analyses of macromolecular sequences [2,4] extends to gene content. ‘Eukaryotic’ gene products encoded by archaebacterial (but not eubacterial) genomes i ...
Replication of DNA.
Replication of DNA.

... Topoisomerase: Enzyme that unknots and uncoils DNA Helicase: Protein that unwinds the DNA double helix. DNA polymerase: Enzyme that replicates DNA using each strand as a template for the newly synthesized strand. DNA ligase: enzyme that catalyzes the formation of the phosphodiester bond between piec ...
Bioinformatics - University of Oxford
Bioinformatics - University of Oxford

... Suppose the gap opening and extension parameters are 0.2 and 0.5 respectively. There is a 80% chance of observing a match, a 20/19% chance of observing any given mismatch and a 5% chance of observing each unaligned amino acid (We can ignore termination for the moment) ...
No Slide Title
No Slide Title

... Pease et al (1994) Proc. Natl. Acad. Sci. U.S.A. 91, 5022. ...
Self-Quiz 3 Questions
Self-Quiz 3 Questions

... Self-Quiz 3 Questions & Answers Activity Three: The ORF Finder Why is there more than one reading frame for a nucleotide sequence? Some sequences are too long to have only one reading frame Reading frames overlap one another There are often more than one start (methionine) codons in a sequence A co ...
(codons) make a specific amino acid
(codons) make a specific amino acid

... • Why does DNA take a double helical orientation? • How is an mRNA sequence translated to produce a specific sequence of specific amino acids? • What happens if mutations occur during semiconservative DNA replication? • Why are ribosomes important for translation? • Could you describe all steps and ...
Topic 7.1
Topic 7.1

Eukaryotic mRNA translation: Ribosome structure, function, and
Eukaryotic mRNA translation: Ribosome structure, function, and

Micronutrient Cofactors
Micronutrient Cofactors

... morphogenesis once ligand binds complex forms a dimmer and bind to an upstream element and facilitate transcription of a gene downstream. Skin and bone metabolism gene pathways ligands for nuclear hormone receptor which are transcription factors that reg. growth, diff, metabolism, reproduction, and ...
at TIGR, DuPont, Agilent or the University of Delaware Earn your Ph
at TIGR, DuPont, Agilent or the University of Delaware Earn your Ph

Statistical Analyses of Microarray Data
Statistical Analyses of Microarray Data

... [email protected] http://biosun01.biostat.jhsph.edu/~ririzarr ...
Sp3 Represses Gene Expression via the Titration of Promoter
Sp3 Represses Gene Expression via the Titration of Promoter

... The DHFR, p21, and MDR-1 Promoters Possess Distinct Sensitivities to Sp-mediated Trans-activation and Repression—We have shown previously that Sp1 and Sp3 stimulate transcription of the DHFR promoter and that Sp1/Sp3-mediated transcription is repressed by two isoforms of Sp3, termed M1 and M2, that ...
Determining a Consensus Sequence Activity Key
Determining a Consensus Sequence Activity Key

Kids Building Bricks - Johnston County Schools
Kids Building Bricks - Johnston County Schools

... (UAC) pairs w/ mRNA codon transporting Met- to the ribosome ...
Effect of HDGF on Hepatic Stellate Cells
Effect of HDGF on Hepatic Stellate Cells

... Release of free radicals and signaling cytokines HSC activation ...
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... Useful molecular marker loci for chromosomal mapping and diagnosis of human disease genes This technique takes advantage of the ability of bacterial restriction enzymes to cut DNA at specific target sequences that exist randomly in the DNA of other organisms. Generally, the target sites are found at ...
source file - MIMG — UCLA
source file - MIMG — UCLA

... metabolism ...
Mutational Profiling of Human Disease Genes
Mutational Profiling of Human Disease Genes

... relationship between sequence variation and susceptibility to disease. M arkers such as SNPs (Single Nucleotide Polymorphisms), insertions and deletions in the human genome are useful in two ways. Firstly, the polymorphism can cause differences in the gene function or regulation that directly contri ...
Study of the arginine repressor in different organisms
Study of the arginine repressor in different organisms

... The arginine repressor (ArgR) regulates transcription of the arginine biosynthetic genes in bacteria. ArgR proteins play a multifunctional role in the bacterial cell. They inhibit biosynthetic promoters and are involved in activation of several catabolic pathways. The arginine repressor of Streptomy ...
Lect-7
Lect-7

... The genome contains unusual bases, they are 5-hydroxy-methyl cytosine (instead of cytosine). This helps in protecting the phage from the host defence system i.e. Restriction enzymes. ...
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Document

... -Analysis of mitochondrial DNA from early human species ...
What is biochemistry?
What is biochemistry?

... our cells repair themselves when they get damaged. Structure and function: An important part of biochemistry is understanding how the 3D shape, or structure, of molecules allows them to carry out their role within the cell – for example, how the shape of an enzyme’s active site relates to its specif ...
A Superfamily of S Locus-Related Sequences in
A Superfamily of S Locus-Related Sequences in

... both members of the Brassicaceae, and the family members that are most closely related to the Brassica S locus genes are therefore easily identified by Brassica-derived probes. Third, unlike Brassica species, which are generally selfincompatible, Arabidopsis lacks a self-incompatibility system; it i ...
Balancing Redox Cofactor Generation and ATP Synthesis: Key
Balancing Redox Cofactor Generation and ATP Synthesis: Key

... ABSTRACT: Geobacillus thermoglucosidasius is a Gram-positive, thermophilic bacterium capable of ethanologenic fermentation of both C5 and C6 sugars and may have possible use for commercial bioethanol production [Tang et al., 2009; Taylor et al. (2009) Trends Biotechnol 27(7): 398–405]. Little is kno ...
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