Document
... evolutionary complexity • Globin genes increase in number from primitive fish to humans – Clusters evolve by duplication and divergence ...
... evolutionary complexity • Globin genes increase in number from primitive fish to humans – Clusters evolve by duplication and divergence ...
Supporting information S1.
... plasmid pBKS-P, carrying the P promoter region, was cloned into the corresponding restriction sites of plasmid pGEM-CAT* to generate plasmid pGEM-P-CAT* (Table S2). Then, the HindIII-EcoRV restriction fragment from plasmid pGEM-P-CAT* was cloned into the corresponding restriction sites of plasmid pB ...
... plasmid pBKS-P, carrying the P promoter region, was cloned into the corresponding restriction sites of plasmid pGEM-CAT* to generate plasmid pGEM-P-CAT* (Table S2). Then, the HindIII-EcoRV restriction fragment from plasmid pGEM-P-CAT* was cloned into the corresponding restriction sites of plasmid pB ...
Systems Biology Conceptual Modeling by Means of Discrete
... more details, where we will show that each event consist of number of sub-events i.e. in order for the DNA to be transcribed into mRNA, the RNA has to go trough five subevents before a mRNA produced. Although the aim of this paper is to develop an event-based simulation model for protein production ...
... more details, where we will show that each event consist of number of sub-events i.e. in order for the DNA to be transcribed into mRNA, the RNA has to go trough five subevents before a mRNA produced. Although the aim of this paper is to develop an event-based simulation model for protein production ...
Identification and analysis of functional elements in 1% of the human
... • As expected, NRSF-bound loci are highly enriched in gene ontology (GO) terms related to neurons and their development. • A group of genes encoding transcription factors that are critical in driving islet cell development in pancreas are newly discovered. • Sequence counts for this group are modest ...
... • As expected, NRSF-bound loci are highly enriched in gene ontology (GO) terms related to neurons and their development. • A group of genes encoding transcription factors that are critical in driving islet cell development in pancreas are newly discovered. • Sequence counts for this group are modest ...
Document
... • We are going to be using this to test for cardiovascular disease in Brazilians. • Once affecting alleles are found, this can possibly help in discovering a cure or treatment. • Also, as testing DNA becomes less expensive, people can be tested to see what affecting alleles for various diseases they ...
... • We are going to be using this to test for cardiovascular disease in Brazilians. • Once affecting alleles are found, this can possibly help in discovering a cure or treatment. • Also, as testing DNA becomes less expensive, people can be tested to see what affecting alleles for various diseases they ...
Replication - UniMAP Portal
... "unzips/unwind" the DNA molecule by breaking the hydrogen bonds between complementary nucleotide bases, which exposes the bases in a replication fork. Other protein molecules stabilize the single strands so that they do not rejoin while replication proceeds ...
... "unzips/unwind" the DNA molecule by breaking the hydrogen bonds between complementary nucleotide bases, which exposes the bases in a replication fork. Other protein molecules stabilize the single strands so that they do not rejoin while replication proceeds ...
Phylogenetic tree construction based on amino acid composition
... evaluate whether the result is based on coincidence or real phenomena. In phylogenetic trees in our study, for example, hagfish (E. burgeri) was distant from aquatic vertebrates; in this case, however, it was concluded that this placement was in fact because of hagfish characteristics [19]. Phylogen ...
... evaluate whether the result is based on coincidence or real phenomena. In phylogenetic trees in our study, for example, hagfish (E. burgeri) was distant from aquatic vertebrates; in this case, however, it was concluded that this placement was in fact because of hagfish characteristics [19]. Phylogen ...
keeSeek: searching distant non-existing words in genomes for PCR
... using four symbols is 4l, the amount of 20-mers that must be tested when looking for the most distant candidate compared with a reference genome is in the order of 1012. By default, keeSeek starts with the generation of all the possible k-mers of a defined length. Alternatively, the user can define ...
... using four symbols is 4l, the amount of 20-mers that must be tested when looking for the most distant candidate compared with a reference genome is in the order of 1012. By default, keeSeek starts with the generation of all the possible k-mers of a defined length. Alternatively, the user can define ...
Reconstructing phylogenetic trees for protein superfamilies
... When each class, A, B and C appear equally similar to each other, the coarse branching order can be difficult to determine. In this case, it’s critical to be able to weight the subfamily-defining residues as more important when computing the distance between classes. ...
... When each class, A, B and C appear equally similar to each other, the coarse branching order can be difficult to determine. In this case, it’s critical to be able to weight the subfamily-defining residues as more important when computing the distance between classes. ...
Document
... freeze-dried/lyophilized after harvesting to allow storage at room temperature (15–25°C). If possible, it is preferable to collect young materials (e.g., leaves, needles) since they contain more cells per weight and therefore result in higher yields of DNA. In addition, young leaves and needles cont ...
... freeze-dried/lyophilized after harvesting to allow storage at room temperature (15–25°C). If possible, it is preferable to collect young materials (e.g., leaves, needles) since they contain more cells per weight and therefore result in higher yields of DNA. In addition, young leaves and needles cont ...
Review of Advanced DNA Structure and Function PPT
... This will have to be repaired – either by the double stranded break repair mechanisms discussed earlier or an end joining mechanism that may alter the original DNA sequences that flanked the transposon. ...
... This will have to be repaired – either by the double stranded break repair mechanisms discussed earlier or an end joining mechanism that may alter the original DNA sequences that flanked the transposon. ...
Transcription – Gene regulation
... Position of IIB and IIA on the TFIID structure and mapping of the TBP. The blue mesh corresponds to the holo-TFIID, with the A, B, and C lobes indicated. (A) The green mesh corresponds to the density difference between the holo-TFIID and the TFIID-IIB complex. (B) The magenta and green meshes show t ...
... Position of IIB and IIA on the TFIID structure and mapping of the TBP. The blue mesh corresponds to the holo-TFIID, with the A, B, and C lobes indicated. (A) The green mesh corresponds to the density difference between the holo-TFIID and the TFIID-IIB complex. (B) The magenta and green meshes show t ...
Supplemental figure 1 Complete CLSM stacks of Ad3 texas
... the Eco RV-linearised form of the three plasmids ppolyAd∆EP-TETP, ppoly-Ad∆EPTETP-∆24, ppoly-Ad∆EP-TETP-∆24∆19 and a modified form of the 28 kb Cla I- Pac I fragment containing a Swa I restriction site inserted into the deleted fiber region 7. The second recombination was between the Swa I-linearise ...
... the Eco RV-linearised form of the three plasmids ppolyAd∆EP-TETP, ppoly-Ad∆EPTETP-∆24, ppoly-Ad∆EP-TETP-∆24∆19 and a modified form of the 28 kb Cla I- Pac I fragment containing a Swa I restriction site inserted into the deleted fiber region 7. The second recombination was between the Swa I-linearise ...
Scientific Dating in Archaeology
... suitable sample for C-14 method but is easily carried by water or landslip etc. and sometimes drops into a small pit made by insects or small animals. In some case, stone artifacts or ceramic shards may vertically move up to 1 m or more. In these cases, the C-14 age obtained for a charcoal near the ...
... suitable sample for C-14 method but is easily carried by water or landslip etc. and sometimes drops into a small pit made by insects or small animals. In some case, stone artifacts or ceramic shards may vertically move up to 1 m or more. In these cases, the C-14 age obtained for a charcoal near the ...
Extension Activity 1: Plasmid Mapping STUDENT MANU AL
... used in the DNA fingerprinting activity were constructed from the same pTZ18U plasmid parent but had different foreign fragments of DNA inserted into them. In the DNA fingerprinting exercise, only two restriction enzymes were used, but other enzymes could also have been used to cut these plasmids. T ...
... used in the DNA fingerprinting activity were constructed from the same pTZ18U plasmid parent but had different foreign fragments of DNA inserted into them. In the DNA fingerprinting exercise, only two restriction enzymes were used, but other enzymes could also have been used to cut these plasmids. T ...
Mutations and Cancer Review Sheet Key
... 14. Humans have 6 x 109 number of base pairs and mutations occur on an average rate of about 1 in every 50 million base pairs. Therefore each new cell contains on average 120 mutations. 15. What is cancer? Uncontrolled proliferation of cells. 16. Explain the link between mutations and cancer. If a m ...
... 14. Humans have 6 x 109 number of base pairs and mutations occur on an average rate of about 1 in every 50 million base pairs. Therefore each new cell contains on average 120 mutations. 15. What is cancer? Uncontrolled proliferation of cells. 16. Explain the link between mutations and cancer. If a m ...
A green chapter in the book of life.
... for the five centromeres — gene-poor structural DNA needed for the pairing and movement of chromosomes during cell division8,9. One might think that crop plants would be more immediately useful to study than this tiny weed. But such plants are themselves large (Box 1), and their genomes are also oft ...
... for the five centromeres — gene-poor structural DNA needed for the pairing and movement of chromosomes during cell division8,9. One might think that crop plants would be more immediately useful to study than this tiny weed. But such plants are themselves large (Box 1), and their genomes are also oft ...
Role of Marine Microbes in Carbon and Nutrient Cycles
... sedimentation. In fact, and for many years, geochemists and geologists have considered “dissolved organic matter” everything that was below 0.45 µm (thus including most bacteria and archaea). Small microbes also have a property that has ecosystem-level implications: they tend to have less water for ...
... sedimentation. In fact, and for many years, geochemists and geologists have considered “dissolved organic matter” everything that was below 0.45 µm (thus including most bacteria and archaea). Small microbes also have a property that has ecosystem-level implications: they tend to have less water for ...
Lectures 1 & 2 (2010.03.05 & 2010.03.06)
... DNA Replication DNA must be replicated before a cell divides, so that each daughter cell inherits a copy of each gene • Cell missing a critical gene will die • Essential that the process of DNA replication produces an absolutely accurate copy of the original genetic information • Mistakes made in c ...
... DNA Replication DNA must be replicated before a cell divides, so that each daughter cell inherits a copy of each gene • Cell missing a critical gene will die • Essential that the process of DNA replication produces an absolutely accurate copy of the original genetic information • Mistakes made in c ...