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Add Health Biomarker - Carolina Population Center
Add Health Biomarker - Carolina Population Center

... individuals with sexually transmitted infections [STI] (including HIV), and genotype ascertainment for pairs of full-siblings or twins who resided in the same households. The STI testing allows for analyses of individual, household, family, and environmental risk factors for laboratory-confirmed sex ...
Mismatch repair
Mismatch repair

... nick, removing a portion of the damaged strand (with its 5’3’ exonuclease activity) and replacing it with undamaged DNA. (d) The nick remaining after DNA polymerase I has dissociated is sealed by DNA ligase. ...
emboj7601266-sup
emboj7601266-sup

... cells, and insoluble proteins were removed by centrifugation (25 min at 3000 and 12000 rpm, respectively). DNA was then removed by polyethyleneimine (PEI, Sigma) precipitation (0.3% per 120 U A260). Next, the salt concentration was lowered to 0.1 M to precipitate proteins. The protein pellet was res ...
Application MALDI-TOF MS for dermatophytes identification
Application MALDI-TOF MS for dermatophytes identification

... Polymorphism (RFLP) [9], real-time PCR [10]. The fragments of DNA necessary to identification usually contained the genes encoding DNA topoisomerases II [11] or chitin synthase I [1]. Other DNA fragments employed in these studies were: 28S ribosomal DNA (rDNA) [12] or internal transcribed spacer reg ...
Epigenetic Effects of Psychological Stressors in Humans
Epigenetic Effects of Psychological Stressors in Humans

... Epigenetic mechanisms including DNA methylation and histone modifications are the link between environment and genome. These mechanisms control gene expression and determine the genetic outcome of an organism. The main well investigated epigenetic mechanisms are DNA methylation and histone modificat ...
Chapter 11 : BIOTECHNOLOGY-PRINCIPLES
Chapter 11 : BIOTECHNOLOGY-PRINCIPLES

... 3. What is the source of thermostable DNA polymerase and Name that polymerase. Why thermostable DNA polymerase is essential in PCR? 1 4 “The prophase I of meiosis plays a vital role in r-DNA formation” Justify the statement.1 5 Eukaryotes do not have restriction endonuclease, then how they manage w ...
University of Minnesota Department of Chemical Engineering
University of Minnesota Department of Chemical Engineering

... Z   exp  Gbind seq   Gbind,opt dseq Z   exp    Gbind  seq   Gbind ,opt    rij  seq   rhbond dseq i 1 j 1 Tij  T0 ...
A human laterality disorder associated with a homozygous
A human laterality disorder associated with a homozygous

... WDR16 gene (gi:124028511) was not covered at all in the patients' samples but was deeply covered (x46-60) in the other samples. WDR16 (NM_145054) consists of 14 exons, encoding 620 amino acids (NP_659491.4). As exon 2 spans 200 bp, a framesfhift variant c.70+1535_270+360del, p.(His25Arg fs*8) would ...
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Slide

... Which representative of the species? Which human? ...
PowerPoint 演示文稿
PowerPoint 演示文稿

... Genetic recombination involves the physical exchange of genetic material between genetic elements. Homologous recombination results in genetic exchange between homologous DNA sequences from two different sources. This type of recombination is extremely important to all organisms. However, it is also ...
investigating dna
investigating dna

... organisms that reproduce asexually or monozygotic twins, individuals have unique traits caused by unique arrangements of these base pairs. Genetic information can be paired down to the functional level of genes. Every gene code has a unique and specific protein. Each protein has a specialized role w ...
What is a genome?
What is a genome?

... Cloning in vectors that can receive long inserts PCR Inverse PCR Bioinformatics can also help, with a number of approaches, but mainly with scaffolding ...
DNA sequence representation by trianders and determinative
DNA sequence representation by trianders and determinative

... We stress that trianders show not only quantitative composition, but allow us to find local motives in a more clear way, because different modules for nucleotides lead to less number of superposition and selfintersections. Also trianders more accurately reflect the tendency of the sequence as a whol ...
Part I - Punjabi University
Part I - Punjabi University

... will cover the entire syllabus uniformly and will carry 20 marks in all. INSTRUCTIONS FOR THE CANDIDATES 1. Candidates are required to attempt one question each from sections A, B, C and D of the question paper and the entire Section-E. 2. The use of scientific calculators is allowed. SECTION-A 1. I ...
DNA CLONING
DNA CLONING

The Role of real-time PCR in the CBRN Environment Palaiodimos L
The Role of real-time PCR in the CBRN Environment Palaiodimos L

... 2) Rapid diagnostic assays in the genomic biology era: detection and identification of infectious disease and biological weapon agents. ...
Simulating Protein Synthesis to create a CHNOPS! Read the
Simulating Protein Synthesis to create a CHNOPS! Read the

...  Genes are the units that determine inherited characteristics such as hair color as blood type. Genes consist of DNA molecules that code for the proteins our cells make. The sequence of nucleotides (and therefore the sequence of bases) in DNA determines the sequence of amino acids in proteins.  Du ...
Unit V DNA RNA Protein Synthesis
Unit V DNA RNA Protein Synthesis

... 1. Chromosomes-A single piece of coiled DNA and associated proteins found in linear forms in the nucleus of eukaryotic cells and circular forms in the cytoplasm of prokaryotic cells; contains genes that code for traits. Each species has its own number of chromosomes. 2. Deoxyribonucleic Acid (DNA) ...
Unusual mutations in high functioning fragile X males
Unusual mutations in high functioning fragile X males

... The proband's grandfather in family A (GZ, II.3) showed a very broad smear of expansions ranging continuously from 48 to 1600 CGGs (figs 1 and 4) in the DNA extracted from white blood cells. Within this smear two particular segments with higher signal intensity were identified; one was between 100 a ...
1 A CAPS marker, FER-G8, for detection of Ty3 and Ty3a alleles
1 A CAPS marker, FER-G8, for detection of Ty3 and Ty3a alleles

... begomovirus resistance genes. Zamir et al. (1994) used LA1969 as a source of Ty-1 gene in chromosome 6 (ca. 8 cM). LA1969 was also the source of resistance against Tomato yellow leaf curl virus (TYLCV) for new lines developed in Cuba (Piňón et al., 2005). Scott and his team (Agrama and Scott, 2006; ...
Essential Cell Biology chapter 5 excerpt
Essential Cell Biology chapter 5 excerpt

... This hereditary information is passed on from a cell to its daughter cells at cell division, and from generation to generation in multicellular organisms through the reproductive cells. These instructions are stored within every living cell in its genes—the information-containing elements that deter ...
AR 25-12.schmidt AUTISM VITAMINS
AR 25-12.schmidt AUTISM VITAMINS

... [Creating an increased risk of that pregnancy leading to an autistic child]. 11) A report of no periconceptional prenatal vitamin intake was associated with significantly greater risk for autism in the child. 12) “No association was observed for reported multivitamin intake during the same period.” ...
2011_InstructorSlidesR
2011_InstructorSlidesR

Self-Organizing Bio-structures
Self-Organizing Bio-structures

Anatomy of the Gene - University of Missouri
Anatomy of the Gene - University of Missouri

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Bisulfite sequencing



Bisulphite sequencing (also known as bisulfite sequencing) is the use of bisulphite treatment of DNA to determine its pattern of methylation. DNA methylation was the first discovered epigenetic mark, and remains the most studied. In animals it predominantly involves the addition of a methyl group to the carbon-5 position of cytosine residues of the dinucleotide CpG, and is implicated in repression of transcriptional activity.Treatment of DNA with bisulphite converts cytosine residues to uracil, but leaves 5-methylcytosine residues unaffected. Thus, bisulphite treatment introduces specific changes in the DNA sequence that depend on the methylation status of individual cytosine residues, yielding single- nucleotide resolution information about the methylation status of a segment of DNA. Various analyses can be performed on the altered sequence to retrieve this information. The objective of this analysis is therefore reduced to differentiating between single nucleotide polymorphisms (cytosines and thymidine) resulting from bisulphite conversion (Figure 1).
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