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Requirements for translation re-initiation in Escherichia coli: roles of
Requirements for translation re-initiation in Escherichia coli: roles of

... PCR Site-Directed Mutagenesis • Was used to create tRNA and mRNA mutants • PCR with olgionucleotide primers that contain the desired mutation were created. By creating a mutation during the first cycle in binding the template DNA strand, a mutation can be introduced. • After a number of cycles the ...
Presentazione standard di PowerPoint
Presentazione standard di PowerPoint

A structural determinant in the uracil DNA glycosylase superfamily
A structural determinant in the uracil DNA glycosylase superfamily

... double-stranded uracil-containing DNA. Binding analysis shows that the substitution enhances the binding affinity of K68N to all uracil-containing double-stranded DNA. Genetic analysis suggests that the K68N mutant can act as a UDG to remove uracil from A/U base pairs, which are formed by misincorpo ...
S1 Supporting Information
S1 Supporting Information

Ch12_lecture - Dr. Brahmbhatt`s Class Handouts
Ch12_lecture - Dr. Brahmbhatt`s Class Handouts

... 12.3 How Is Biotechnology Used In Forensic Science?  Gel electrophoresis separates DNA segments. • A mixture of DNA pieces is separated by a technique called gel electrophoresis. • The mixture of DNA is loaded onto a slab of agarose. • The gel is put in a chamber with electrodes connected to each ...
C8 Challenge
C8 Challenge

... repaired by DNA replication. repaired during transcription. repaired during translation. cut out and replaced. ANSWER BACK TO GAME ...
Efficient Ends-Out Gene Targeting In Drosophila
Efficient Ends-Out Gene Targeting In Drosophila

... Verification of crb::mEosFPKI and dArf6KO targeted alleles: To verify the crb::mEosFPKI allele, genomic DNA was extracted from homozygous mutant larvae or adult males for PCR verification. HJ58 and HJ59 flank the mEosFP insertion in crb::mEosFPKI. Wild type gDNA will yield a 185bp product, while gDN ...
Lab 1 Scientific Experimentation: Standard Curve Analysis
Lab 1 Scientific Experimentation: Standard Curve Analysis

... that humans can find things out directly from experience without having to depend on other humans (or books, etc.) for knowledge, and that the rules that are deduced can be used to make predictions about the outcome of future events so we can plan effective actions. Scientists write down the conclus ...
1548 Tn Gene Is Borne by Composite Transposon Aminoglycoside
1548 Tn Gene Is Borne by Composite Transposon Aminoglycoside

... 17); (ii) enzymatic modification of the drug (21), primarily through N-acetylation, O-nucleotidylation, or O-phosphorylation, which is the most common mechanism; (iii) modification of the target by mutation in ribosomal proteins or in 16S rRNA (18); and (iv) trapping of the drug (13, 14). Microorgan ...
GENETIC VARIATION OF TASTE RECEPTORS Abstract
GENETIC VARIATION OF TASTE RECEPTORS Abstract

... unpredictability in taste perception. Individual changes in the capability to identify bitter tasting compounds, such as phenylthiocarbamide (PTC) were a well-known example of this variability. This difference divided the people in two groups: tasters and non-tasters, and is because of in part to si ...
Name - the BIOTECH Project
Name - the BIOTECH Project

... so students may have correct answers that aren't included in this guide. Finally, although the experiment is set up to yield one correct answer, there are variations in data between students. As long as students examine their data carefully and can justify their answers based on their data, that's s ...


... B15 (13 pts) The HIV reverse transcriptase (HIV-RT) is also a drug target for AIDS drugs. As with the HIV protease, mutations arise in this enzyme, generating HIV viruses that are resistant to existing drugs. Pharmaceutical companies would like to characterize these altered reverse transcriptases to ...
The Living World
The Living World

Lab 1 genomic DNA
Lab 1 genomic DNA

... Phenol is a strong denaturing agent for proteins. In phenol extractions, proteins partition into the organic phase (and interface) whereas nucleic acids partition in the aqueous phase. Usually phenol is used in a 1: 1 mixture with chloroform since deproteinization is more effective when two differen ...
A phage library and two cosmid libraries were
A phage library and two cosmid libraries were

... E. coli LE392. A total of 2x1O 6 plaques at a density of 3.5x1O4 plaques/plate (150 nun 0) was screened by the plaque hybridization assay (29) using the pBR322 subclone L6/5 (30) as a probe which was derived from a mouse V v germline gene region. Hybridization conditions were the same as described f ...
Evaluation of genomic DNA from paraffin
Evaluation of genomic DNA from paraffin

... Dogs that are clinically diagnosed with DCM reveal two distinct histological forms of DCM. Cardiomyopathy of Boxers and Doberman Pinschers are called “fatty infiltration-degenerative” type and in many giant, large- and medium-sized breeds DCM can be classified as “attenuated wavy fiber” type. Attenu ...
DNA BASE PAIR “Friendship Bracelets” Background: DNA is the
DNA BASE PAIR “Friendship Bracelets” Background: DNA is the

Infectious Pancreatic Necrosis Virus
Infectious Pancreatic Necrosis Virus

... The primer and probe mix provided exploits the so-called TaqMan® principle. During PCR amplification, forward and reverse primers hybridize to the IPNV cDNA. A fluorogenic probe is included in the same reaction mixture which consists of a DNA probe labeled with a 5`-dye and a 3`-quencher. During PCR ...
dna biometrics - Danish Biometrics
dna biometrics - Danish Biometrics

... “Biometrics” is a term used in many aspects of our world. It is no longer a term known only to the government or “secret research organizations”. Biometrics is characterized by physical features of a being and measurement of those features. When the general public hears biometrics, the first thought ...
Microbiology of diabetic foot infections: from Louis Pasteur to Łcrime
Microbiology of diabetic foot infections: from Louis Pasteur to Łcrime

... the most revolutionary are those used to sequence DNA directly from a sample, known as metagenomics [42]. Metagenomic methods can potentially provide not only the names of the pathogens present in an infected wound, but information on their virulence and their antibiotic susceptibility patterns (to ...
Identification of Mga1, a G‐protein α‐subunit gene involved in
Identification of Mga1, a G‐protein α‐subunit gene involved in

... M. ruber M7 yielded nine putative disruptants, which exhibited a similar set of morphological changes as described in Cryphonectria parasitica Ga-null mutants (Gao & Nuss, 1996), including reduced vegetative growth and conidiation, and that abolished sexual reproduction (Fig. 3). The putative disrup ...
DNA/RNA Set - Edgerton Center
DNA/RNA Set - Edgerton Center

... Initially, students will test each one of the two DNA strands to learn which strand the mRNA nucleotides base-pair with to make the mRNA strand correctly. Key points the models can teach us about transcription: 1. mRNA will be the same sequence as the DNA nucleotides in the gene ( U for T) . 2. mR ...


... (UVR7/AtERCC1) (2003). Mutants are sensitive to gamma radiation (unlike human homolog), MMC, UV-B, MMS (slightly) and exhibit 'gamma plantlet' response: irradiated seed germinate normally but the production of first true leaves is substantially delayed. Like atrad1 mutants, atercc1 mutants exhibit d ...
DNA/RNA Set - MIT Edgerton Center
DNA/RNA Set - MIT Edgerton Center

... Initially, students will test each one of the two DNA strands to learn which strand the mRNA nucleotides base-pair with to make the mRNA strand correctly. Key points the models can teach us about transcription: 1. mRNA will be the same sequence as the DNA nucleotides in the gene ( U for T) . 2. mRNA ...
Supercoils in plant DNA: nucleoid
Supercoils in plant DNA: nucleoid

... A. Photograph of the centrifugation tube under u.v. light. B. 254 nm absorbance curve of the same gradient. Nucleoids were prepared as described in Materials and methods. Fractionation was from bottom to top. U, upper; L, lower nucleoid bands. ...
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Bisulfite sequencing



Bisulphite sequencing (also known as bisulfite sequencing) is the use of bisulphite treatment of DNA to determine its pattern of methylation. DNA methylation was the first discovered epigenetic mark, and remains the most studied. In animals it predominantly involves the addition of a methyl group to the carbon-5 position of cytosine residues of the dinucleotide CpG, and is implicated in repression of transcriptional activity.Treatment of DNA with bisulphite converts cytosine residues to uracil, but leaves 5-methylcytosine residues unaffected. Thus, bisulphite treatment introduces specific changes in the DNA sequence that depend on the methylation status of individual cytosine residues, yielding single- nucleotide resolution information about the methylation status of a segment of DNA. Various analyses can be performed on the altered sequence to retrieve this information. The objective of this analysis is therefore reduced to differentiating between single nucleotide polymorphisms (cytosines and thymidine) resulting from bisulphite conversion (Figure 1).
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