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Solving the structure of DNA
Solving the structure of DNA

... Thermodynamically, they postulated that the most stable double helix would be one in which the sugar phosphate backbone interacted with water and the more hydrophobic nitrogenous bases were inside the helix hidden from the water. Chargaff's data suggested that the different bases interacted with one ...
Chapter 4 part I
Chapter 4 part I

... - PCR is a very robust technique - DNA preparation is relatively simple - Target DNA sequences do not have to be isolated from other DNA - Great care must be taken to avoid contamination of samples in case of forensics study - The starting DNA template may be isolated from prokaryotic or eukaryotic ...
File
File

... Even before nucleic acids were identified as the genetic material, biologists recognized that, whatever the nature of genetic material, it must possess four important characteristics. ...
Agarose Gel Electrophoresis - Cal State LA
Agarose Gel Electrophoresis - Cal State LA

An Introduction to DNA Computing
An Introduction to DNA Computing

... To implement step 2, the product of step 1 was amplified by PCR using oligonucleotide primers representing vin and vout and ligase enzyme. This amplified and thus retained only those molecules encoding paths that begin with vin and end with vout. ~1014 computations are carried out in a single second ...
HEPATITIS B VIRAL (HBV DNA), QUANTITATIVE
HEPATITIS B VIRAL (HBV DNA), QUANTITATIVE

... Linear reporting range of the assay is 20 - 1.7 x 10 8 IU/mL Conversion factor: 1 IU/mL = 5.82 copies / mL Test conducted on Serum / Plasma This test is not intended for use as a screening test for the presence of HBV in blood or blood products or as a diagnostic test to confirm the presence of HBV ...
DNA Sequencing - ILRI Research Computing
DNA Sequencing - ILRI Research Computing

... Getting rid of vector sequences is easy once you recognize the problem: just check for them. Repeat sequence DNA is very common in eukaryotes, and sequencing highly repeated regions (such as centromeres) remains difficult even now. High quality sequencing helps a lot: small variants can be reliably ...
Recombinant DNA Technology and Molecular Cloning
Recombinant DNA Technology and Molecular Cloning

Monitoring viral DNA release with capillary electrophoresis
Monitoring viral DNA release with capillary electrophoresis

... T5 phages, members of the Siphoviridae family, depend on their host Escherichia coli to initiate the process of DNA release from the phage. For DNA release to occur, T5 phages must bind irreversibly to the outer membrane ferrichrome receptor FhuA of E. coli, by virtue of the T5 phage protein pb5 loc ...
SURF 2010 Prospectus.doc
SURF 2010 Prospectus.doc

... charge of the DNA is due to the sugar-phosphate backbone thus gives all fragments an equal negative charge. The size of the DNA pieces can then be determined by comparing against a 1 Kbp DNA ladder. After running the gel, the DNA will be tagged with Ethidium Bromide. When EtBr is bound to DNA it is ...
DNA structure and replication_AP Bio
DNA structure and replication_AP Bio

... the DNA polymerase molecules as moving along a stationary DNA template. • In reality, the various proteins involved in DNA replication form a single large complex that may be anchored to the nuclear matrix. • The DNA polymerase molecules “reel in” the parental DNA and ...
Physiological Homeostasis means …………
Physiological Homeostasis means …………

... that were needed for transformation. (some scientists were not convinced and continued to back protein as the molecule for inheritance) 3. Hershey & Chase – worked with bacteriophage (viruses that attack bacteria). They used radioisotopes to track proteins and DNA in the virus. Showing categorically ...
1BIOLOGY 220W - Lecture Notes Packet
1BIOLOGY 220W - Lecture Notes Packet

... its own specific recognition site. The original experiments on cloning of DNA depended heavily on restriction enzymes to cut DNA in prescribed ways, and they are still extremely useful in molecular genetics. Daniel Nathans was awarded the Nobel Prize for his elucidation of restriction endonucleases. ...
Chromosomes Notes Review
Chromosomes Notes Review

... 21. A section of DNA that provides information for a particular protein 22. The sex chromosomes that are only found in males For the following questions, determine which term below correctly matches. Some answers may have more than one answer. Autosomes Sex Chromosome 23. Determines the gender of th ...
Download: Genes, Genomics, and Chromosomes
Download: Genes, Genomics, and Chromosomes

Chapter 6A
Chapter 6A

Demonstration of the ExpandTM PCR System`s Greater Fidelity and
Demonstration of the ExpandTM PCR System`s Greater Fidelity and

... lacking proofreading activity, such as the Taq DNA polymerase preparations and Tth DNA polymerase. In addition, the Expand PCR System mixtures produce substantially higher yields than all proofreading DNA polymerases, even from smaller amounts of DNA template. All other commercially available polyme ...
Definition of a Gene - Kaikoura High School
Definition of a Gene - Kaikoura High School

DNA SEQUENCING (using an ABI automated sequencer)
DNA SEQUENCING (using an ABI automated sequencer)

L-08
L-08

Chapter 16
Chapter 16

... Keep in mind… • There are 46 DNA molecules (that is, chromosomes) in each of your cells • That’s 6 billion base pairs • It would take about 900 AP Biology books to print it all out (A’s, T’s, C’s and G’s) • It takes a cell just a few hours to copy all of that information • And the cells are VERY go ...
Glossary - Crop Genebank Knowledge Base
Glossary - Crop Genebank Knowledge Base

... Using molecular marker technology in studies on plant genetic diversity ...
Rapid and reproducible DNA isolation from 1 ml of whole blood with
Rapid and reproducible DNA isolation from 1 ml of whole blood with

How Genes and Genomes Evolve
How Genes and Genomes Evolve

Bio 3A Lab: DNA Isolation and the Polymerase Chain Reaction
Bio 3A Lab: DNA Isolation and the Polymerase Chain Reaction

... PCR amplification includes three main steps, denaturation step, an annealing step and an extension step (these steps are summarized in Figure 1). During denaturation, the reaction mixture is heated to 94°C for 1 minute, which results in the melting out or separation of the double-stranded DNA templa ...
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Comparative genomic hybridization



Comparative genomic hybridization is a molecular cytogenetic method for analysing copy number variations (CNVs) relative to ploidy level in the DNA of a test sample compared to a reference sample, without the need for culturing cells. The aim of this technique is to quickly and efficiently compare two genomic DNA samples arising from two sources, which are most often closely related, because it is suspected that they contain differences in terms of either gains or losses of either whole chromosomes or subchromosomal regions (a portion of a whole chromosome). This technique was originally developed for the evaluation of the differences between the chromosomal complements of solid tumor and normal tissue, and has an improved resoIution of 5-10 megabases compared to the more traditional cytogenetic analysis techniques of giemsa banding and fluorescence in situ hybridization (FISH) which are limited by the resolution of the microscope utilized.This is achieved through the use of competitive fluorescence in situ hybridization. In short, this involves the isolation of DNA from the two sources to be compared, most commonly a test and reference source, independent labelling of each DNA sample with a different fluorophores (fluorescent molecules) of different colours (usually red and green), denaturation of the DNA so that it is single stranded, and the hybridization of the two resultant samples in a 1:1 ratio to a normal metaphase spread of chromosomes, to which the labelled DNA samples will bind at their locus of origin. Using a fluorescence microscope and computer software, the differentially coloured fluorescent signals are then compared along the length of each chromosome for identification of chromosomal differences between the two sources. A higher intensity of the test sample colour in a specific region of a chromosome indicates the gain of material of that region in the corresponding source sample, while a higher intensity of the reference sample colour indicates the loss of material in the test sample in that specific region. A neutral colour (yellow when the fluorophore labels are red and green) indicates no difference between the two samples in that location.CGH is only able to detect unbalanced chromosomal abnormalities. This is because balanced chromosomal abnormalities such as reciprocal translocations, inversions or ring chromosomes do not affect copy number, which is what is detected by CGH technologies. CGH does, however, allow for the exploration of all 46 human chromosomes in single test and the discovery of deletions and duplications, even on the microscopic scale which may lead to the identification of candidate genes to be further explored by other cytological techniques.Through the use of DNA microarrays in conjunction with CGH techniques, the more specific form of array CGH (aCGH) has been developed, allowing for a locus-by-locus measure of CNV with increased resolution as low as 100 kilobases. This improved technique allows for the aetiology of known and unknown conditions to be discovered.
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