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Explanation of Scaffold`s Display Options - Proteome Software
Explanation of Scaffold`s Display Options - Proteome Software

... % of total spectra: This is the percentage of the total number of spectra which is assigned to the protein in question. This number is the number of assigned spectra for this protein divided by the total spectra in the sample (as seen in the Load Data View). Assigned spectra: This is the number of s ...
lecture5lifes_chemical_basis
lecture5lifes_chemical_basis

... Biochemistry because it was demonstrated that the conformation of a polypeptide chain can be predicted if the properties of its constituents are rigorously and precisely known. For this work Pauling got the Nobel prize in Chemistry in 1954. The helical content of a protein may vary anywhere between ...
Biochemistry http://www.brainpop.com/science/matterandchemistry
Biochemistry http://www.brainpop.com/science/matterandchemistry

Make notes using these questions
Make notes using these questions

... Amino acid R-groups are described as hydrophilic or hydrophobic. What does this mean? Draw a table to show the four levels of protein structure. Include descriptions and diagrams. Bonding is extremely important in protein structure. Describe the types of bonds that would be found at each level of pr ...
ppt - UCLA Chemistry and Biochemistry
ppt - UCLA Chemistry and Biochemistry

... Which of the following are reasons why mass spectrometry is a useful tool in protein sequencing?(choose all that apply) ...
Document
Document

... Solve NMR structure of complex… ...
Protein
Protein

... Protein is made of chains of substances called amino acids: a type of organic acid. – Organic acids are molecules that contain a carboxyl group (COOH). – They also contain an amine group: two atoms of hydrogen and one atom of nitrogen (-NH2). ...
say “cheese!”
say “cheese!”

... the milk protein molecules into globules in the milk. You can’t see them because even though they are large molecules, molecules are still too small to see with the human eye. Because pH (the acidity of a liquid) and high temperature both disrupt chemical bonds, they can affect how a molecule forms ...
Aminoacids
Aminoacids

... determine the protein sequence • If you know the protein sequence you cannot completely define the nucleotide sequence that it came from. • Sequence != function or structure ...
Mass Spectrometry - University of Exeter
Mass Spectrometry - University of Exeter

protein-complex_cros..
protein-complex_cros..

BLAST Database Searching
BLAST Database Searching

... identical, they are likely homologous Two protein sequences – at least 25% identical over 100 amino acid alignment Does not take into account precise length of alignment, or number of gaps! Not sufficient to quantitatively rank hits from a database search ...
Biochemical Analysis of the Binding Interaction between LanI and its
Biochemical Analysis of the Binding Interaction between LanI and its

... indicating the specificity of LanI proteins. SpaI (B. subtilis), which shares 17% sequence homology to NisI, has also been shown to specifically interact with subtilin, however the KD has not been determined. In order to study the LanI-lantibiotic interaction in vitro, nisin, subtilin and their self ...
Protein modification and trafficking
Protein modification and trafficking

... • Appropriately modified proteins leave the ER and travel to the Golgi Apparatus. • They travel in membrane vesicles that arise from special regions of membranes that are coated by proteins. • There are of three types of coated vesicles that are well characterized, clathrin-coated, COPI-coated and C ...
Principles of Skeletal Muscle Adaptation
Principles of Skeletal Muscle Adaptation

... – also repress gene for fast II b myosin HC, turn on fast IIa myosin HC – not only enlarged, but change in contractile phenotype – larger, slower contracting fiber. ...
6 / Systems Biology
6 / Systems Biology

Antibody
Antibody

... Drosophila melanogaster (fruit fly) : 180 million bases, 14,000 genes Human : 3 billion bases, 23,000 genes • Static and absolute information ...
Chapter 11. Protein Structure and Function
Chapter 11. Protein Structure and Function

... of proteins • Many proteins are not single peptide strands. • They are combinations of several proteins • - aggregate of smaller globular proteins. • Conjugated protein - incorporate another type of group that performs a specific function. • prosthetic group ...
Function of plasma protein in diagnosis of animal disease
Function of plasma protein in diagnosis of animal disease

... • Globulins fall into one of four groups based on their size and electrical charge: • gamma, beta, alpha-1 and alpha-2. ...
عرض تقديمي من PowerPoint
عرض تقديمي من PowerPoint

... affected by heat because it does not contain disulphide bonds and lack the tertiary structure. • The solubility of casein depends greatly on the PH of the medium. • The intermediate PH at which a protein molecule has a charge of zero is called, the isoelectric point of that protein. • At this point ...
pH - Bio-Link
pH - Bio-Link

... formed (tertiary structure). Finally, a native protein may consist of more than one polypeptide chain, and this is referred to as quaternary structure. The interaction of the polypeptide chains involves hydrogen bonds and hydrophobic interactions. ...
Proteins - UF Macromolecular Structure Group
Proteins - UF Macromolecular Structure Group

... Phenotype of organism 3 Dimensional structure Function by interaction ...
English - Child Nutrition
English - Child Nutrition

... the essential amino acids.  Best sources are in meat and milk Incomplete protein is described as food that lack an essential amino acid.  To get the essential amino acids add nuts and beans to a vegetable based diet. ...
Protein Lab 2012 PDF
Protein Lab 2012 PDF

... molecules into globules in the milk. You can’t see them because even though they are large molecules, molecules are still too small to see with the human eye. Because pH (the acidity of a liquid) and high temperature both disrupt chemical bonds, they can affect how a molecule forms or how it behaves ...
bio12_sm_07_3
bio12_sm_07_3

... 1. In both eukaryotes and prokaryotes, the key steps in the initiation of translation are the association an initiator methionine-tRNA with the small ribosomal subunit. The complex binds the mRNA at the 5' cap and scans for the AUG start codon. The large ribosomal subunit then binds, completing the ...
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Interactome



In molecular biology, an interactome is the whole set of molecular interactions in a particular cell. The term specifically refers to physical interactions among molecules (such as those among proteins, also known as protein-protein interactions) but can also describe sets of indirect interactions among genes (genetic interactions). Mathematically, interactomes are generally displayed as graphs.The word ""interactome"" was originally coined in 1999 by a group of French scientists headed by Bernard Jacq. Though interactomes may be described as biological networks, they should not be confused with other networks such as neural networks or food webs.
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