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Organic Chemistry 6th Edition Paula Yurkanis Bruice Chapter 24 Catalysis 1 © 2011 Pearson Education, Inc. Catalyst A catalyst is a substance that increases the rate of a reaction without itself being consumed or changed A catalyst increases the rate of the reaction by lowering the DG‡ of the reaction A catalyst can decrease DG‡ of the reaction by one of three different ways 2 © 2011 Pearson Education, Inc. The Catalyst Converts the Reactant to a Less Stable Species 3 © 2011 Pearson Education, Inc. The Catalyst Stabilizes the Transition State 4 © 2011 Pearson Education, Inc. The Catalyst Changes the Mechanism of the Reaction 5 © 2011 Pearson Education, Inc. A catalyst can provide a more favorable pathway for an organic reaction by: • Increasing the susceptibility of an electrophile to nucleophilic attack • Increasing the reactivity of a nucleophile • Increasing the leaving ability of a group by converting it to a weaker base • Increasing the stability of a transition state 6 © 2011 Pearson Education, Inc. Acid Catalysis Mechanism for acid-catalyzed ester hydrolysis A proton is donated to the reactant: 7 © 2011 Pearson Education, Inc. A catalyst must increase the rate of a slow step: 8 © 2011 Pearson Education, Inc. In specific-acid catalysis, the proton is fully transferred before the slow step of the reaction In general-acid catalysis, the proton is transferred during the slow step of the reaction 9 © 2011 Pearson Education, Inc. Comparing Specific-Acid Catalysis with General-Acid Catalysis 10 © 2011 Pearson Education, Inc. A specific-acid catalyst must be a strong acid A general-acid catalyst is usually a weaker acid 11 © 2011 Pearson Education, Inc. Base Catalysis A base catalyst increases the rate of the reaction by removing a proton from the reaction: specific-base-catalyzed dehydration 12 © 2011 Pearson Education, Inc. The rate of the reaction is accelerated by stabilization of the transition state: 13 © 2011 Pearson Education, Inc. In specific-base catalysis, the proton is completely removed before the slow step of the reaction 14 © 2011 Pearson Education, Inc. In general-base catalysis, the proton is removed during the slow step of the reaction: 15 © 2011 Pearson Education, Inc. Nucleophilic Catalysis • Increases the rate of a reaction by acting as a nucleophile, thereby completely changing the reaction mechanism • Forms an intermediate by forming a covalent bond with the reactant • Also known as covalent catalysis 16 © 2011 Pearson Education, Inc. 17 © 2011 Pearson Education, Inc. 18 © 2011 Pearson Education, Inc. Imidazole catalyzes ester hydrolysis via an acyl intermediate: Imidazole increases the rate of ester hydrolysis because of both its nucleophilicity and its leaving ability 19 © 2011 Pearson Education, Inc. Metal-Ion Catalysis Metal ions are Lewis acids: electrophilic catalyst A. The metal ion makes a reaction center more susceptible to receiving electrons B. The metal ion makes the leaving group a weaker base C. The metal ion increases the nucleophilicity of water © 2011 Pearson Education, Inc. 20 Metal-bound hydroxide ions are better nucleophiles than water 21 © 2011 Pearson Education, Inc. Metal-Ion-Catalyzed Decarboxylation 22 © 2011 Pearson Education, Inc. Metal-Ion-Catalyzed Ester Hydrolysis • The metal-bound hydroxide is a better nucleophile than water. • The metal ion also decreases the basicity of the leaving group. 23 © 2011 Pearson Education, Inc. 24 © 2011 Pearson Education, Inc. • The relative rates are also called the effective molarity. • The effective molarity is the advantage given to a reaction by having the reacting groups in the same molecule. • The relative rate of reactant D is higher than the relative rate of B because the groups in D are less apt to adopt an unfavorable conformation for the reaction. 25 © 2011 Pearson Education, Inc. 26 © 2011 Pearson Education, Inc. Intramolecular Catalysis • Putting a reacting group and a catalyst in the same molecule increases the rate of the reaction. • Intramolecular catalysis is also known as anchimeric assistance. 27 © 2011 Pearson Education, Inc. The trans isomer reacts much faster than the cis isomer: 28 © 2011 Pearson Education, Inc. The rate of phenyl acetate hydrolysis is enhanced by an intramolecular general base catalysis: 29 © 2011 Pearson Education, Inc. In the presence of nitro groups, the ortho-carboxyl substituent acts as an intramolecular nucleophilic catalyst: 30 © 2011 Pearson Education, Inc. An Intramolecular Metal-Ion Catalysis 31 © 2011 Pearson Education, Inc. Most Biological Catalysts Are Enzymes The reactants are called substrates The substrate specifically fits and binds to the active site 32 © 2011 Pearson Education, Inc. Hexokinase undergoes a conformational change upon binding to a substrate: red: before substrate binding green: after substrate binding 33 © 2011 Pearson Education, Inc. Factors Contributing to the Catalytic Ability of Enzymes • Reacting groups are brought together at the active site in the proper orientation for reaction. • Some of the amino acid side chains serve as catalysts. • Many enzymes have metal ions at their active sites that act as catalysts. • Amino acid side chains can stabilize transition states and intermediates. 34 © 2011 Pearson Education, Inc. Proposed Mechanism of Carboxypeptidase A 35 © 2011 Pearson Education, Inc. The binding pocket at the active site of serine proteases dictates substrate specificity: 36 © 2011 Pearson Education, Inc. Proposed Reaction Mechanism of a Serine Protease 37 © 2011 Pearson Education, Inc. Lysozyme Is an Enzyme That Destroys Bacterial Cell Walls 38 © 2011 Pearson Education, Inc. The amino acids at the active site of lysozyme are involved in binding the substrate 39 © 2011 Pearson Education, Inc. Proposed Reaction Mechanism for Lysozyme 40 © 2011 Pearson Education, Inc. The pH–rate profile of an enzyme is a function of the pKa values of the catalytic groups in the enzyme: a group is catalytically active in its basic form a group is catalytically active in its acidic form 41 © 2011 Pearson Education, Inc. Glucose-6-phosphate Isomerase 42 © 2011 Pearson Education, Inc. Mechanism for Aldolase 43 © 2011 Pearson Education, Inc.