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Atlas of Genetics and Cytogenetics
in Oncology and Haematology
INIST-CNRS
OPEN ACCESS JOURNAL
Gene Section
Review
BCL6 (B-Cell Lymphoma 6)
Jean-Loup Huret
Genetics, Dept Medical Information, University of Poitiers, CHU Poitiers Hospital, F-86021 Poitiers, France
(JLH)
Published in Atlas Database: December 2012
Online updated version : http://AtlasGeneticsOncology.org/Genes/BCL6ID20.html
DOI: 10.4267/2042/50185
This article is an update of :
Knezevich S. BCL6 (B-Cell Lymphoma 6). Atlas Genet Cytogenet Oncol Haematol 2007;11(3):177-179.
Kerckaert JP. LAZ3 (Lymphoma Associated Zinc finger on chromosome 3). Atlas Genet Cytogenet Oncol Haematol 1999;3(1):1-2.
This work is licensed under a Creative Commons Attribution-Noncommercial-No Derivative Works 2.0 France Licence.
© 2013 Atlas of Genetics and Cytogenetics in Oncology and Haematology
Identity
Transcription
Other names: BCL5, LAZ3, ZBTB27, ZNF51,
BCL6A
HGNC (Hugo): BCL6
Location: 3q27.3
Local order: Gene orientation: telomere - 5' BCL6 3' centromere.
3,8 kb mRNA.
Protein
Description
The protein product is 706 amino acids with an
estimated molecular weight of 78,8 kDa.
Expression
Normally expressed in germinal center B and T cells,
other lymphoid tissues, in skeletal muscle cells and in
keratinocytes.
Localisation
Nuclear paraspeckles/dots.
Function
Protein domains and functions
The protein can bind to sequence specific DNA and
repress its transcription in addition to recruiting other
protein repressors. The DNA binding is mediated
through the consensus sequence TTCCT(A/C)GAA
(see below), while the protein-protein interactions are
mediated through the BTB/POZ domain and it has been
shown to interact with other zinc finger proteins and
corepressors (including Histone Deacetylase 1
(HDAC1) and NCOR2 (Silencing Mediator of Retinoid
and Thryoid Receptor 1 (SMRT1))). The carboxy
terminus, on the other hand, is responsible for sequence
specific DNA binding through its 6 zinc fingers.
BCL6 (3q27) - Courtesy Mariano Rocchi, Resources for
Molecular Cytogenetics.
DNA/RNA
Description
The gene is encoded by 11 exons that are located on
chromosome 3q27 and is 24,3 kb. The 5' portion
encodes for the BTB/POZ domain (broadcomplex/tramtrack/bric-a-brac/pox virus/zinc finger),
while the 3' end encodes for 6 DNA binding zinc
fingers. The first ATG occurs in exon 3.
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BCL6 (B-Cell Lymphoma 6)
Huret JL
BCL6 is therefore essential for normal B cell
development (reviews in Albagli-Curiel, 2003; Jardin
et al., 2007; Parekh et al., 2008; Basso and DallaFavera, 2010; Pellicano and Holyoake, 2011; Wagner
et al., 2011; Basso and Dalla-Favera, 2012; Okada et
al., 2012).
- T follicular helper cells
BCL6 is essential for the development of follicular
helper T (Tfh) cells. Tfh cells are defined by the
expression of the surface markers CXCR5 and PD-1
and synthesis of IL4 and IL21. BCL6 upregulation of B
cells in the outer follicle sustains their interactions with
helper T cells and allows them to enter the germinal
centers (GC) region (Poholek et al., 2010; Kitano et al.,
2011; Baumjohann et al., 2011). ICOS induces BCL6,
and BCL6 then induces CXCR5.
Tfh cells were lost in the absence of B cells,
demonstrating a B cell requirement for maintenance of
BCL6 and Tfh cell commitment (Choi et al., 2011).
BCL6 and MAF cooperate to induce Tfh cell
differentiation (Kroenke et al., 2012).
Consensus DNA motifs recognized by BCL6
The Zn fingers of BCL6 binds to DNA and recognizes
specific DNA motifs: the M00424 motif, a consensus
sequence for the NKX-homeobox family of
transcription factors, the M2 motif, which mimics an
M00424 half site; and the M0 motif (see details in
Basso et al., 2010).
BCL6 cellular function
- BCL6 cellular function in germinal centers of
lymph nodes follicles
Mature naïve B cells migrate from the bone marrow to
lymphoid nodes, meet the antigen, they are stimulated
to proliferate and further differentiate into centroblasts
in germinal centers (GC) of lymphoid follicles.
There, cells are subjects to somatic hypermutation and
class switch recombination, to further differenciate into
memory B cells or plasma cells. This process also
requires the presence of follicular helper T cells.
BCL6 has a major role in this process. In particular,
BCL6 prevents ATM and TP53 (Phan et al., 2004) to
induce apoptosis in response to DNA rearrangements
such as those necessary for somatic hypermutation and
class switch recombination processes.
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BCL6 (B-Cell Lymphoma 6)
Huret JL
(which binds the PEST domain). Deacetylation of
histones leads to transcriptional repression of BCL6
targets.
BCL6 interacts with ZBTB17 to repress CDKN1A and
BCL2 (Phan et al., 2005). BCL6 has also been found to
interact with other POK family members ((POZ and
Krüppel)/ZBTB (zing finger and BTB) protein family)
such as ZBTB7A (LRF) and ZBTB16 (PLZF).
BCL6 targets
An integrated biochemical and computational approach
has recently identified thousands of BCL6 direct target
genes, including B cell receptor (BCR; note: nothing to
do with BCR, the partner of ABL1) and CD40
signaling genes (involved in signal transduction,
MAPK activation, NF-AT activation, and NF-kB
activation); T cell-mediated B-cell activation; apoptosis
(BCL2, proteins involved in positive and negative
regulation of the DISC complex and caspase activation,
suggesting a role for BCL6 in balancing pro- and
antiapoptotic programs in GC B cells); response to
DNA damage (ATM, TP53, CDKN1A, ATR, CHEK1,
TP53BP1...); interferon and cytokine signaling
(interferon-type and interleukin receptors that lead to
activation of JAK/STAT. STAT1, STAT3, and
STAT5A were also found to be directly repressed by
BCL6); Toll-like receptor signaling; TGFb receptor
signaling; and WNT signaling (Basso et al., 2010).
- Other tissues
BCL6 promotes survival of olfactory sensory neurons
(Otaki etal., 2010).
BCL6 associate to NACC1 in brain regions (Korutla et
al., 2009).
BCL6 forms a complex with BCOR on the promoters
of Notch target genes in Xenopus embryos (Sakano et
al., 2010).
BCL6-overexpression inhibits osteoclastogenesis, and
the PRDM1 (Blimp-1)/BCL6 balance is essential in
regulating the bone homeostasis by controlling
osteoclastogenesis (Miyauchi et al., 2010). BCL6
controls the expression of the CC-type chemokine
genes and attenuates allergic airway inflammation in
pulmonary epithelium (Seto et al. 2011).
BCL6 repression activity
BCL6 binds to DNA as a homodimer and recruits corepressor molecules, which, in turn, recruit class I and
II histone deacetylases. BCL6 and histone deacetylases
(HDACs) form stable complexes. BCL6 binds HDACs
both directly through its C-terminal Zn fingers and
through its N-terminal BTB/POZ domain and indirectly
by recruiting several co-repressors such as BCOR,
NCOR1, NCOR2 (which bind in a mutually exclusive
way to the BTB/POZ domain), CTBP1 (which binds
the BTB/POZ and the PEST domains), and MTA3
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NF-kB, NF-AT, and AP-1 (Francis et al., 1995). ILF2
(NF45) and ILF3 (NF90) form the nuclear factor of
activated T-cells (NF-AT), a crucial transcription factor
essential for productive T cell activation (Kao et al.,
1994). CD40 signalling reduces BCL6 expression,
through induction of IRF4 by the NF-kB pathway
(Saito et al., 2007).
- PRDM1 (review in Crotty et al., 2010)
JUND/AP-1 and activated STATs drive high BCL6
expression in GC B cells (Arguni et al., 2006). STAT5
up-regulates BCL6 expression (Scheeren et al., 2005);
in contrast, STAT3 up-regulates PRDM1 (Diehl et al.,
2008) (the protein coded from PRDM1 is named
Blimp-1). BCL6 directly promotes the expression of
BACH2, which repress PRDM1 (Blimp-1). BCL6 also
suppresses PRDM1 (Blimp-1) through repression of
IRF4. IRF4 binds to and induces PRDM1. PRDM1
(Blimp-1) abrogates BCL6. PAX5 (protein name:
BSAP) contributes to BCL6 expression (Nera et al.,
2006; Tarlinton, 2011). PAX5 abrogates PRDM1
(Blimp-1), which abrogates PAX5. BCL6 and PAX5
promote the expression of AICDA and UNG (which
have a major role in somatic hypermutation and classswitch recombination) (Alinikula et al., 2011). BCL6
positively regulates AICDA, IRF8, and MYB via
repression of MIR155 (Basso et al., 2012). BCL6
mediates transcriptional repression by recruiting
HDACs.
BCL6 regulation
- B cell receptor
B cell receptor (BCR) induces BCL6 phosphorylation
by MAPK1 on Ser333 and Ser343, which targets BCL6 for rapid degradation by the ubiquitin/proteasome
pathway (Niu et al., 1998). FBXO11 promotes BCL6
ubiquitylation and degradation (Duan et al., 2012).
- DNA damage
After DNA damage, the kinase ATM promotes BCL6
phosphorylation; follows an interaction with PIN1
required for BCL6 degradation (Phan et al., 2007).
- EP300
EP300 binds and acetylates BCL6, which inactivates
BCL6 (acetylation disrupts the ability of BCL6 to
recruit histone deacetylases). The same two pathways
(HDAC pathway and SIRT2 pathway) that regulate
acetylation-mediated activation of TP53 also control
acetylation-mediated
inactivation
of
BCL6
(Bereshchenko et al., 2002). BCL6 represses the
expression of EP300 and its cofactor BAT3 (Cerchietti
et al., 2010). EP300 acetylates and activates PAX5 (He
et al., 2011), which enhances BCL6.
- Autoregulation
BCL6 protein binds BCL6 gene promoter, and repress
BCL6, mechanism of negative autoregulation
(Pasqualucci et al., 2003). PATZ1 interacts with BCL6
and is required for its negative autoregulation (Pero et
al., 2012).
- CD40 signaling
CD40 signaling activates various pathways, including
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MIR155 directly targets HDAC4 and indirectly
attenuates BCL6 expression (Sandhu et al., 2012).
PRDM1 (Blimp-1) represses BCL6, and also PAX5,
MYC, and AICDA (review in Martins and Calame,
2008).
IRF8 is expressed at the high levels in germinal center
(GC) B cells. IRF8 binds BCL6 promoter and activates
BCL6 (Lee et al., 2006).
It is also to be noted that IRF4 is involved in the
t(6;14)(p25;q32) IRF4/IGH. PRDM1 (Blimp-1) is
inactivated in about 50% of the activated B cell-like
(ABC) subtype of diffuse large B cell lymphoma
(ABC- DLBCL) (Mandelbaum et al., 2010).
overall survival, especially for the non-GC phenotype
(Akyurek et al., 2012).
Implicated in
3q27 rearrangements /NHL (non
Hodgkin lymphomas)
Disease
B cell non-Hodgkin Lymphoma (B-NHL)
Prognosis
Generally considered to be a better prognosis if there is
increased expression of BCL6. The mechanism by
which its expression is increased does not seem to
matter (ie different translocation partners increasing its
expression results in the same prognosis).
Cytogenetics
3q27 rearrangements/aberrations are diverse and
include:
translocations,
micro-deletions,
point
mutations and hypermutation.
Approximately 50% of 3q27 translocations involves Ig
genes at 14q32 (IgH), 2p12 (IgK) and 22q12 (IgL) (e.g.
t(3;14)(q27;q32)). Less than half (~40%) include a
variety of other chromosomal regions (1q21, 2q21,
4p11, 5q31, 6p21, 7p12, 8q24, 9p13, 11q13, 11q23,
12q11, 13q14-21, 14q11, 15q21; 16p11...).
In addition, there are frequent bi-allelic alterations
(translocation and deletion or mutation on the nontranslocated allele).
Hybrid/Mutated gene
hybrid gene and transcripts are formed following
promoter substitution between BCL6 and its different
partners.
Chimeric transcripts are generally detected containing
the 5' part of the gene partner fused to the normal
BCL6 exon 2 splice acceptor site.
In some cases reciprocal chimeric transcripts driven by
the 5' regulatory region of BCL6 fused to the partner
gene coding region, have been characterised.
Homology
BTB/POZ - Zinc Finger proteins (PLZF, HIC1, KUP,
BAZF, ttk (drosophila), BrC (drosophila)...).
Mutations
Note
Chromosomal translocations involving BCL6 are found
in 40% of diffuse large B-cell lymphomas (DLBCL), 510% of follicular lymphomas (FL), and 50% of nodular
lymphocyte predominant Hodgkin lymphomas.
Mutations in the autoregulatory region of BCL6 leads
to a constitutive BCL6 expression (Pasqualucci et al.,
2003).
IRF4 response elements in the BCL6 gene mediate
repression of BCL6.
Mutations in the IRF4 repression region of BCL6 gene
also leads to constitutive expression of BCL6 (Saito et
al., 2007).
MYC, BCL2, and BCL6 rearrangements were detected
in 6%, 15%, and 29% respectively of diffuse large Bcell lymphoma (DLBCL) patients. Double or triple
rearrangements were detected in 3% of these patients.
MYC rearrangement was associated with a
significantly
worse
overall
survival.
BCL6
rearrangement also predicted a significantly shorter
Atlas Genet Cytogenet Oncol Haematol. 2013; 17(6)
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BCL6 (B-Cell Lymphoma 6)
Huret JL
- t(1;3)(q25;q27) the gene in 1q25 is GAS5
- t(2;3)(p12;q27) the gene in 2p12 is IGK
- t(3;3)(q25;q27) the gene in 3q25 is MBNL1
- t(3;3)(q27;q27) the gene in 3q27 is ST6GAL1
- t(3;3)(q27;q27) the gene in 3q27 is EIF4A2
- t(3;3)(q27;q29) the gene in 3q29 is TFRC
- t(3;4)(q27;p13) the gene in 4p13 is RHOH
- t(3;6)(q27;p22) the gene in 6p22 is HIST1H4I
- t(3;6)(q27;p21) the gene in 6p21 is PIM1
- t(3;6)(q27;p21) the gene in 6p21 is SFRS3
- t(3;6)(q27;q15) the gene in 6q15 is SNHG5
- t(3;7)(q27;p12) the gene in 7p12 is IKZF1
- t(3;7)(q27;q32) the gene in 7q32 is FRA7H
- t(3;8)(q27;q24.1) the gene in 8q24.1 is MYC
- t(3;9)(q27;p24) the gene in 9p24 is DMRT1
- t(3;9)(q27;p11) the gene in 9p11 is GRHPR
- t(3;11)(q27;q23) the gene in 11q23 is POU2AF1
- t(3;12)(q27;p13) the gene in 12p13 is GAPDH
- t(3;12)(q27;q12) the gene in 12q12 is LRMP
- t(3;13)(q27;q14) the gene in 13q14 is LCP1
- t(3;14)(q27;q32) the gene in 14q32 is IGH
- t(3;14)(q27;q32) the gene in 14q32 is HSP90AA1
- t(3;16)(q27;p13) the gene in 16p13 is CIITA
- t(3;16)(q27;p11) the gene in 16p11 is IL21R
- t(3;19)(q27;q13) the gene in 19q13 is NAPA
- t(3;22)(q27;q11) the gene in 22q11 is IGL
Abnormal protein
No fusion protein.
(prolactin) rapidly suppressed BCL6. Loss of PRLSTAT5a signaling and concomitant upregulation of
BCL6 may represent a regulatory switch facilitating
undifferentiated histology and poor prognosis (Brill et
al., 2010).
Bladder transitional cell carcinoma
Disease
BCL6 protein overexpression is observed in half of the
cases of transitional cell carcinoma.
However, BCL6 over-expression has a negative
correlation with the histological grade (Cho et al.,
2007).
Soft tissue tumors
Disease
BCL6 expression is more frequent in malignant
compared with benign/uncertain solitary fibrous
tumors, as well as in leiomyosarcomas compared with
leiomyomas (Walters et al., 2011).
Neuroblastoma
Disease
In the neuroblastic phenotype of neuroblastoma, BCL6
expression is associated with increased time to relapse
and increased overall survival (Chamdin et al., 2009).
Gastric cancer
Disease
In a study of 100 gastric cancer cases, BCL6 was
highly expressed in differentiated cancers and reduced
or absent in undifferentiated cancers. However,
survival was identical in BCL6-positive and BCL6negative cases (Hirata et al., 2009).
t(9;22)(q34;q11) leukemias
Disease
BCL6 enables Ph+ acute lymphoblastic leukaemia cells
to survive BCR-ABL1 kinase inhibition (Duy et al.
2011).
In chronic myelogenous leukemia (CML), BCL6 acts
as a critical effector downstream of FoxO in selfrenewal signaling of CML-initiating cells. Therefore,
pharmacological inhibition of BCL6 may represent a
novel strategy to eradicate leukemia-initiating cells in
CML (Hurtz et al., 2011).
Multiple myeloma
Disease
IL6 induces transcriptional up-regulation of BCL6 via
JAK/STAT3 pathway. TNF (TNF alpha) up-regulates
BCL6. BCL6 expression is mediated independantly via
both JAK/STAT3 and NF-KB pathways in multiple
myeloma cells (Hideshima et al., 2010).
Breast cancer
Breakpoints
Disease
BCL6 protein is elevated in human breast cancers,
especially in high-grade, poorly differentiated and
metastatic breast cancer cases (Bos et al., 2003;
Logarajah et al., 2003; Brill et al., 2010). PRL
Atlas Genet Cytogenet Oncol Haematol. 2013; 17(6)
Note
Clustered in a 3,3 kb EcoRI fragment (MTC) includind
exon 1A and intron 1.
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BCL6 (B-Cell Lymphoma 6)
Huret JL
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