Download Functional Annotation - Plant metabolic pathway database (PMN

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Transcript 
OmicsViewer: evaluating data in metabolic context
Microarray expression data: low temperature regulatory circuits and
gene regulons in higher plants (Michael Tomashow group).
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Compound: dihydrozeatin
Pathway: cytokinins 9-N-glucoside biosynthesis
Compound: xanthoxin
Pathway: abscisic acid biosythesis
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OMICS Viewer
Data types accepted by OmicsViewer
Experiment/
Data
Value assigned
to
OmicsViewer
output
Microarray
Expression
Genes
(enzymes)
Colored reaction
lines
Proteomics
Proteins
(enzymes)
Colored reaction
lines
Metabolomics
Metabolites
(compounds)
Colored
compounds
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Data value
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Result A: single page for a single time point
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Result B: animation (two time points)
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Result C: single page (ratio of two time points: 2 /3)
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Result D: animation (three pages: : 2 /1, 3 /1, 4 /2)
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Presentation Credits
Donghui Li
curator, TAIR
First presented in:
18th International Conference on Arabidopsis
Beijing, China
June 2007
TAIR Workshop: Part IV:
Presentation of AraCyc, the Arabidopsis thaliana metabolic database
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