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Crops2Industry “Non-food Crops-to-Industry schemes in EU27” WP 2 Tasks: 2-1 to 2-3 Task leader: Dimitra Milioni CROPS TO INDUSTRY Work Package 2: Plant breeding Objectives: To identify current molecular genetic technologies (genomic and biotechnological tools) and suggest their potential applications in a crop-specific manner to address a wide range of breeding constraints •Task 2.1: To survey the generic tools currently available for the selected non-food crops/species research, breeding production and processing •Task 2.2: To identify European Genetic Resource Centres •Task 2.3: To capitalize on biotechnology tools and exploit the knowledge of the post genomic era for possible future non-food crops improvement CROPS TO INDUSTRY Spanning the gap between genomics and breeding. Varshney et al., 2010 CROPS TO INDUSTRY Work Package 2: Plant breeding Objectives: To identify current molecular genetic technologies (genomic and biotechnological tools) and suggest their potential applications in a crop-specific manner to address a wide range of breeding constraints •Task 2.1: To survey the generic tools currently available for the selected non-food crops/species research, breeding production and processing •Task 2.2: To identify European Genetic Resource Centres •Task 2.3: To capitalize on biotechnology tools and exploit the knowledge of the post genomic era for possible future non-food crops improvement CROPS TO INDUSTRY European Genetic Resource Centres Germplasm as a starting point European Cooperative Crop Genetic Resources Program (ECPGR) EURISCO, a web-based catalogue Centre for Genetic Resources, The Netherlands (CGN) Centre for Plant Genetic Resources Poland, Blonie, Poland Istituto di Genetica Vegetale (Germplasm Research Institute), Italy The Nordic Gene Bank, Alnarp, Sweden The Research Institute of Crop Production, Czech Republic UK Plant Genetic Resources Group, UK Germplasm Resources Information Network (GRIN), USA CROPS TO INDUSTRY CROPS TO INDUSTRY Molecular Genomics Resource Centres Not one gene but all the genes European Molecular Biology Laboratory – European Bioinformatics Institute (EMBL-EBI) National Centre for Biotechnology Information (NCBI) DNA Databank in Japan (DDBJ) The Institute for Genome Research (TIGR) PlantGDB Brassica Genome Gateway GRAMENE CROPS TO INDUSTRY CROPS TO INDUSTRY CROPS TO INDUSTRY Orthologous gene families between sorghum, Arabidopsis, rice and poplar. Whole genome shotgun sequencing project AH Paterson et al. Nature 457, 551-556 (2009) doi:10.1038/nature07723 CROPS TO INDUSTRY Alignment of sorghum, rice and maize. AH Paterson et al. Nature 457, 551-556 (2009) doi:10.1038/nature07723 CROPS TO INDUSTRY Molecular markers to study genetic diversity in sogrhum germplasms Simple Sequence Repeats (SSR) Inter Simple Sequence Repeats (ISSR) Random Amplified Polymorphic DNA (RAPD) Amplified Fragment Length Polymprphism (AFLP) Diversity Arrays Technology (DArT) Single Feature Polymorphism (SFP) Quantitative Trait Locus (QTL) CROPS TO INDUSTRY Genetic mapping of QTLs for sugar-related traits in a RIL population of Sorghum bicolor L. Moench Shiringani et al., TAQ (2010); 121(2):32336. CROPS TO INDUSTRY An Induced Sorghum Mutant Population Gallery of selected mutant phenotypes CROPS Section of the leaf blade from BTx623, P5A3, and P7H6 TO INDUSTRY Genetic transformation of Sorghum Production of transgenic sorghum plants Plant Cell, Tissue and Organ Culture doiI: 10.1007/s11240-007-9228-1 CROPS Development of transgenic sorghum for insect resistance against the spotted stem borer (Chilo partellus). TRANSGENIC SWEET SORGHUM WITH ALTEREDLIGNIN COMPOSITION AND PROCESS OF PREPARATION THEREOF (United StatesPatent Application 20100058496) TO INDUSTRY Crops2Industry “Non-food Crops-to-Industry schemes in EU27” Thank you for your attention CROPS TO INDUSTRY