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C483 Study Guide for Exam 3 Spring 2017 Basic Information Exam 3: Thursday, April 20, 7:15-9:15PM in Rawles 100 Arrive early for assigned seats Bring your student ID. Failure to do so will result in getting your exam back later. You may use a NON-PROGRAMMABLE calculator. All papers, books, phones, and electronic devices must be in a sealed bag under your seat. The exam will cover chapters 13-15 and 17, which includes Glycolysis, gluconeogenesis, glycogen metabolism, pentose phosphate pathway Pyruvate dehydrogenase complex, citric acid cycle Electron transport chain, protonmotive force, oxidative phosphorylation Fatty acid degradation and synthesis, cholesterol synthesis and processing Major topics Stages/major purpose/net reaction for pathways Intermediates of glycolysis, gluconeogenesis, citric acid cycle, glycogen metabolism, fatty acid metabolism o Structure and name of intermediates and enzymes o Thermodynamics of each step, qualitative and quantitative o Major regulation steps; reciprocal regulation strategies o Points of interconnection between pathways o Amount of ATP/reduced cofactor produced in each step/pathway o Cofactors needed for transformation Arrow mechanisms if mechanism is given in class o NAD+/NADH redox (lactate DH, glucose-6-phosphate DH, etc) o Isomerases (phosphoglucose, triose phosphate, etc) o Aldolase o GAP DH (using the structure of NAD+) o Pyruvate carboxylase o Pyruvate DH (TPP step) o Citrate synthase o Compare/contrast isocitrate DH and -ketoglutarate DH o transketolase Pentose phosphate pathway: know phases, purposes, alternate modes, which type of enzyme needed for a given transformation, transketalase mechanism Electron transport chain/oxidative phosphorylation o Order of main complexes and mobile carriers (not details of complexes) o Number of protons pumped o Qualitative/quantitative redox reactions o P:O ratio o Basic mechanism of binding-change ATP production