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Essential Biology 10.2 Dihybrid Crosses and Gene Linkage Student Name: Blog resource: http://tinyurl.com/6jp9zrw Click4Biology: http://click4biology.info/c4b/10/gene10.htm Highlight all objective 1 command terms in yellow and complete these before class. Highlight all objective 2 and 3 command terms in green – 1. Distinguish between dihybrid and monohybrid crosses. Mono Di- 2. When Mendel came upon his law of independent assortment, he was studying sweet-pea colour and shape. These traits are carried on separate chromosomes. The colour yellow (Y) is dominant over green (y). Smooth peas (S) are dominant over rough (s). a. State the law of independent assortment. b. State the possible genotypes for the following phenotypes: Yellow, Smooth Green, rough Green, Smooth yyss only Yellow, rough c. Use the punnet grid to predict the ratio of phenotypes of offspring in a cross between two peas which are heterozygous for both genes (SsYy x SsYy). SY i. Sy sY sy SY Sy sY sy Phenotype Smooth Yellow Smooth green Rough Yellow Rough Green Ratio 3. A researcher has some smooth yellow peas. He wants to find out if they are homozygous or heterozygous for these dominant characteristics, so he performs a test cross. Stephen Taylor(pages 1-7) Bandung International School http://sciencevideos.wordpress.com Essential Biology 10.2 Dihybrid Crosses and Gene Linkage Student Name: a. State the genotype and phenotype of the plant that must be used as the test cross. Genotype: Phenotype: b. Complete a series of punnet grids for this cross. Deduce the phenotype ratios expected in the following crosses. i. Heterozygous for both colour and shape? ii. Phenotype Ratio ii. Homozygous for both colour and shape. iii. Phenotype Ratio Stephen Taylor(pages 1-7) Bandung International School http://sciencevideos.wordpress.com Essential Biology 10.2 Dihybrid Crosses and Gene Linkage Student Name: iii. Heterozygous for colour, homozygous for shape. iv. Phenotype Ratio iv. Homozygous for colour, heterozygous for shape. CA CA Phenotype Ratio c. In the cross, the student found 120 yellow-smooth and 124 green-smooth. Deduce the most likely genotype for the unknown pea. Explain your answer. Genotype: Explanation: d. State the statistical test used to test for significance of difference between observed and expected outcomes. Stephen Taylor(pages 1-7) Bandung International School http://sciencevideos.wordpress.com Essential Biology 10.2 Dihybrid Crosses and Gene Linkage Student Name: 4. Some genes affect the expression of others. a. Define gene interaction. b. Identify the phenotype ratios for a cross between two ‘agouti’ (brown) mice, where: Gene C determines if colour is present: C = coat has colour If colour is present, then: A = agouti (brown) The mice are both heterozygous for both genes. c = albino a = black CA CA Phenotype Ratio c. Explain why the phenotype ratio is not 9:3:3:1. 5. Mendel’s law of independent assortment makes the assumption that genes for a pair or group of traits are being carried on separate chromosomes, and therefore the presence of one allele in a gamete is not connected to the presence of another. However, with hundreds of genes per chromosome, it is likely that some genes will be physically linked and therefore alleles will be inherited together. a. Define linkage groups. b. State the consequence of gene linkage in terms of the movement of alleles in anaphase I. Linkage groups will not… Stephen Taylor(pages 1-7) Bandung International School http://sciencevideos.wordpress.com Essential Biology 10.2 Dihybrid Crosses and Gene Linkage Student Name: c. State two plant examples of gene linkage. The notation shows genes of Zea mays (corn). It is described as “heterozygous at both loci”. These are both traits related to the corn kernels. Key: C = colour, c = no colour; W = waxy, w = no wax. Draw some other possible combinations of these linked genes: Homozygous dominant at both loci Homozygous recessive at locus 1. (you decide) – describe it d. Complete a punnet grid to show the possible phenotypes produced by a cross between the corn that is heterozygous at both loci. Use correct notations and show your working. Phenotype Ratio e. List the combinations of alleles which are not possible in the cross above (unless recombination takes place at Prophase I). Stephen Taylor(pages 1-7) Bandung International School http://sciencevideos.wordpress.com Essential Biology 10.2 Dihybrid Crosses and Gene Linkage Student Name: f. A small number of kernels which are coloured but not waxy appear in the offspring. Explain the process that must have occurred for this to be the case. Process: g. State the stage of meiosis during which crossing over and exchange of alleles can occur. h. Complete the punnet grid below: P p l p l L p l PpLl no recombination with crossing over (recombinants) 6. The term linkage is used in various ways in genetics. a. Distinguish between autosomes and sex chromomes. b. Distinguish between gene linkage and sex linkage. Complete further practice of dihybrid crosses and gene linkage using the faces that you made in the Genotype to Phenotype activity and on the Practice Problems sheet. Be sure to set out all answers clearly. Stephen Taylor(pages 1-7) Bandung International School http://sciencevideos.wordpress.com Essential Biology 10.2 Dihybrid Crosses and Gene Linkage Student Name: Works Cited 1. Allott, Andrew. IB Study Guide: Biology for the IB Diploma. s.l. : Oxford University Press, 2007. 978-0-19-915143-1. 2. Mindorff, D and Allott, A. Biology Course Companion. Oxford : Oxford University Press, 2007. 978-099151240. 3. Clegg, CJ. Biology for the IB Diploma. London : Hodder Murray, 2007. 978-0340926529. 4. Campbell N., Reece J., Taylor M., Simon. E. Biology Concepts and Connections. San Fransisco : Pearson Benjamin Cummings, 2006. 0-8053-7160-5. 5. Taylor, Stephen. Science Video Resources. [Online] Wordpress, 2010. http://sciencevideos.wordpress.com. 6. Burrell, John. Click4Biology. [Online] 2010. http://click4biology.info/. 7. IBO. Biology Subject Guide. [Online] 2007. http://xmltwo.ibo.org/publications/migrated/productionapp2.ibo.org/publication/7/part/2/chapter/1.html. Mendelian Genetics Practice Problems For the problems listed below, you are to solve the type of inheritance and explain the rationale of your choice. 1. Mice I o a) cross 1: red-eyed mouse X white-eyed mouse gives F1: all red-eyed cross 2: red-eyed F1 X red-eyed F1 gives F2: 36 red-eyed 13 white-eyed o b) cross 1: long-eared mouse X short-eared mouse gives F1: 12 long-eared 10 short-eared cross 2: long-eared F1 X long-eared F1 gives F2: 36 long-eared 13 short-eared Stephen Taylor(pages 1-7) Bandung International School http://sciencevideos.wordpress.com Essential Biology 10.2 Dihybrid Crosses and Gene Linkage Student Name: 2. Flowers cross 1: blue-flowered plant X white-flowered plant gives F1: all pale-blue-flowered cross 2: pale-blue F1 X pale-blue F1 gives F2: 27 blue 49 pale-blue 24 white 3. Blood Type o a) cross 1: person, type A blood X person with type B gives F1: all type AB blood cross 2: type AB F1 X type AB F1 gives F2: 2 type A 4 type AB 1 type B o b) cross 1: type A blood X type B gives F1: 2 type A blood 3 type AB blood 1 type B blood 2 type O blood 4. Mice II cross 1: tail-less mouse X normal mouse gives F1: 10 tail-less 9 normal cross 2: tail-less F1 X tail-less F1 gives F2: 10 normal 21 tail-less 9 dead 5. Flies cross 1: red-eyed female X red-eyed male gives F1: 50 red-eyed female Stephen Taylor(pages 1-7) Bandung International School http://sciencevideos.wordpress.com Essential Biology 10.2 Dihybrid Crosses and Gene Linkage Student Name: 25 red-eyed male 25 white-eyed male cross 2: white-eyed male F1 X red-eyed female F1 52 crosses give: 30 red male 33 red female 48 crosses give: 22 red male 24 red female 21 white male 23 white female 6. Pedigrees 7. Mice III o a) cross 1: blue-eyed, long-toothed mouse X brown-eyed, short-toothed mouse gives F1: all blue-eyed, short-toothed cross 2: blue-eyed, short-toothed F1 X blue-eyed, short-toothed F1 gives F2: Stephen Taylor(pages 1-7) Bandung International School http://sciencevideos.wordpress.com Essential Biology 10.2 Dihybrid Crosses and Gene Linkage Student Name: 92 blue-eyed short-toothed 31 blue-eyed long-toothed 29 brown-eyed short-toothed 9 brown-eyed long-toothed (NOTE how this result is different from the blood-type result because here we are dealing with two genes and there we were dealing with multiple alleles of one gene.) o b) cross 1: tall, green plant X short, yellow plant gives F1: 20 tall green 20 short green cross 2: tall, green X short, yellow (different plants than (b)) gives F1: 19 tall green 21 tall yellow 8. Pathways I o a) assume the following pigment-producing pathway in a plant: o o o o enz A enz B compound 1 ----------> compound 2 ------------> compound 3 (colorless) (red) (purple) Also assume that the A and B alleles produce functional enzyme, while the a and b alleles produce no functional enzyme. Assume that one functional copy of an enzyme is sufficient to catalyze the reaction. cross 1: AaBb X AaBb predict the colors of the progeny. o o o o o o o o o b) what if the pathway were: enz B enz A compound 1 ----------> compound 2 ------------> compound 3 (red) (colorless) (purple) c) Assume two parallel pigment pathways: enz A enz B red pigment <----------colorless compound --------------> blue pigment cross 1: Aabb X aaBb gives F1: 33 white Stephen Taylor(pages 1-7) Bandung International School http://sciencevideos.wordpress.com Essential Biology 10.2 Dihybrid Crosses and Gene Linkage Student Name: 32 red 35 blue 9. Linkage: cross 1: rough, soft pea X smooth, hard pea gives F1: all rough, hard cross 2: rough, hard F1 X smooth, soft (note: different mating than usual) gives F2: 115 rough soft 110 smooth hard 8 rough hard 12 smooth soft 10. A pedigree that illustrates multiple possible models is: 11. A man with a Y-linked disorder has three sons and three daughters by the same mother. His first son has two sons and two daughters by another woman. Draw the pedigree for this family. How could you tell if this disorder was Y linked or sex-linked recessive? 12. Three genes in Drosophila with the recessive alleles l, m, and n are known to be linked. You wish to determine the map distances between them and perform the cross shown below. (Note: The gene order drawn here is arbitrary - you need to determine the order of these genes on the chromosome) Progeny with the following phenotypes are seen: Stephen Taylor(pages 1-7) Bandung International School http://sciencevideos.wordpress.com Essential Biology 10.2 Dihybrid Crosses and Gene Linkage Student Name: Determine the order of these markers on the chromosome and the distances between them in centimorgans. 13. This problem appeared on a previous 7.012 Exam. Alkaptonuria is an extremely rare disease. The gene for Alkaptonuria (ALK) has recently been shown to lie on human chromosome 9 and to be linked to the gene encoding the ABO blood group, with a recombination frequency of 11% between the loci. A pedigree of a family with the disease is shown below, with affected individuals indicated in black. In addition, the blood type of family members is given. The two alleles at the ALK locus will be denoted ALK+ and ALK-. The three alleles at the ABO blood group locus will be denoted IA, IB (which are co-dominant) and i (which is recessive to IA and IB). (a) What is the genotype of individual 1 at the ALK and ABO loci? (b) What is the genotype of individual 2 at the ALK and ABO loci? Stephen Taylor(pages 1-7) Bandung International School http://sciencevideos.wordpress.com Essential Biology 10.2 Dihybrid Crosses and Gene Linkage Student Name: (c) What is the genotype of individual 3 at the ALK and ABO loci? Which alleles of each gene are carried on the chromosome he inherited from his father and which alleles are carried on the chromosome he inherited from his mother? (d) Individuals 3 and 4 are expecting their fifth child. A physician draws a prenatal blood sample and determines that the child has blood type B. What is the probability that the child will have alkaptonuria? Explain your answer. You can check your answers on the Solutions Page. Stephen Taylor(pages 1-7) Bandung International School http://sciencevideos.wordpress.com