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Genetics & The Work of Mendel AP Biology 2006-2007 Do you know these terms? alleles Homozygous Heterozygous Phenotype Genotype Test cross Back cross Mendel’s Laws AP Biology Genetics The study of inheritance how genes are passed on through generations What is a gene? A section of DNA that codes for a protein AP Biology Gregor Mendel Modern genetics began in the mid-1800s in an abbey garden, where a monk named Gregor Mendel documented inheritance in peas used experimental method used quantitative analysis collected data & counted them AP Biology excellent example of scientific method Mendel’s work Bred pea plants Pollen transferred from white flower to stigma of purple flower P cross-pollinate true breeding parents (P) Pure or homozygous raised seed & then observed traits (F1) Hybrid or heterozygous allowed offspring to self-pollinate & observed next generation (F2) AP Biology anthers removed all purple flowers result F1 self-pollinate F2 Generations P - parents. Usually pure breeding – ex. BB or bb F1 - are hybrid – Bb since they get a B from one parent and b from the other due to meiosis F2 - the result of crossing two Bb. The ratio is usually 3:1 dominant:recessive AP Biology Mendel collected data for 7 pea traits AP Biology Looking closer at Mendel’s work P F1 true-breeding true-breeding X purple-flower peas white-flower peas 100% purple-flower peas Where did the white flowers go? 100% generation (hybrids) self-pollinate F2 generation AP Biology 75% purple-flower peas White flowers came back! 25% white-flower peas 3:1 What did Mendel’s findings mean? Traits come in alternative versions purple vs. white flower color Alleles are genes for the same trait different alleles vary in the sequence of nucleotides at the specific locus of a gene some difference in sequence of A, T, C, G purple-flower allele & white-flower allele are two DNA variations at flower-color locus different versions of gene at same location on homologous chromosomes AP Biology Traits are inherited as discrete units For each characteristic, an organism inherits 2 alleles, 1 from each parent diploid organism inherits 2 sets of chromosomes, 1 from each parent AP Biology What did Mendel’s findings mean? Some traits mask others purple & white flower colors are separate traits that do not blend purple x white ≠ light purple purple masked white _Wild type(Dominant) functional protein masks other alleles mutant allele producing malfunctioning protein _Mutatant(recessive) allele makes a malfunctioning protein AP Biology wild type allele producing functional protein homologous chromosomes Genotype vs. phenotype Difference between how an organism “looks” & its genetics Phenotype description of an organism’s trait the “physical” Genotype description of an organism’s genetic makeup X P Explain Mendel’s results using …dominant & recessive …phenotype & genotype AP Biology purple white F1 all purple Making crosses Can represent alleles as letters flower color alleles P or p true-breeding purple-flower peas PP true-breeding white-flower peas pp PP x pp X P purple white F1 AP Biology all purple Pp Looking closer at Mendel’s work P true-breeding true-breeding X purple-flower peas white-flower peas phenotype PP pp 100% purple-flower peas F1 100% generation (hybrids) Pp self-pollinate F2 75% purple-flower peas 25% white-flower peas generation AP Biology ? ? ? ? 3:1 Punnett squares Pp x Pp F1 Aaaaah, phenotype & genotype can have different ratios generation (hybrids) % genotype male / sperm female / eggs P AP Biology P p PP % phenotype 25% 75% Pp 50% Pp p pp 25% 25% 1:2:1 3:1 Genotypes Homozygous = same alleles = PP, pp Heterozygous = different alleles = Pp homozygous dominant heterozygous homozygous recessive AP Biology Phenotype vs. genotype 2 organisms can have the same phenotype but have different genotypes purple PP purple Pp heterozygous homozygous dominant How do you determine the genotype of an individual with with a dominant phenotype? AP Biology Test cross Cross the dominant phenotype — the unknown genotype — with a homozygous recessive (pp) to determine the identity of the unknown allele How does that work? x is it PP or Pp? AP Biology pp How does a Test cross work? Am I this? Or am I this? x PP P pp Pp pp P P p p p p p AP Biology x 100% purple 50% purple:50% white or 1:1 RESULTS If any recessive offspring result, the parents were hybrid If all (of many offspring) show the dominant trait, the parents probably are pure dominant for that trait, but you can’t prove it. AP Biology Back Cross If you know the parents, you can determine the offspring genotypes (look back at the parents) If any parents have the recessive trait, the offspring (with the dominant trait) MUST BE HYBRID. AP Biology Pedigree chart B-Brown allele b-blue allele We know that The blues must be pure What is the genotype bb B_ here? 2 1 3 bb 5 7 bb 6 bb Black shows recessive trait AP Biology 4 8 Bb Mendel’s laws of heredity Segregation Tt single trait T t each allele segregates into separate gametes established by Metaphase 1 Independent Assortment 2 or more traits genes on separate chromosomes assort into gametes independently established by Metaphase 1 AP Biology EXCEPTION linked genes metaphase1 Law of Dominance When parents with different expressions of a trait (brown/blue, red/white) are crossed, the trait that is shown in the F1 is the dominant trait, and the hidden trait is recessive NOTE: This is not always true but it was for the traits Mendel studied. AP Biology Law of Segregation-explanation during meiosis, alleles segregate PP (homologous chromosomes separate) P P each allele for a trait is packaged into a separate gamete p pp p P Pp AP Biology p Law of Segregation Which stage of meiosis creates the law of segregation? Whoa! And Mendel didn’t even know DNA or genes existed! AP Biology Monohybrid cross Some of Mendel’s experiments followed the inheritance of single characters flower color seed color Monohybrids AP Biology Dihybrid cross Other of Mendel’s experiments followed the inheritance of 2 different characters seed color and seed shape Dihybrids AP Biology Mendel was working out many of the genetic rules! Yellow/green, Round/wrinkled Dihybrid cross P true-breeding yellow, round peas Y = yellow R = round true-breeding green, wrinkled peas x YYRR yyrr y = green r = wrinkled yellow, round peas F1 100% generation (hybrids) YyRr self-pollinate F2 generation AP Biology 9:3:3:1 9/16 yellow round peas 3/16 green round peas 3/16 yellow wrinkled peas 1/16 green wrinkled peas What’s going on here? If genes are on different chromosomes… how do they assort in the gametes? together or independently? YyRr YR AP Biology yr Is it this? Or this? YR YyRr Yr Which system explains the data? yR yr YyRr Dihybrid cross YR YyRr x YyRr YR YR Yr yR yr AP Biology Yr yR yr yr or YyRr YR Yr yR yr 9/16 yellow round 3/16 green round 3/16 yellow wrinkled 1/16 green wrinkled Law of Independent Assortment Law of Independent Assortment different loci (genes) separate into gametes independently non-homologous chromosomes align independently yellow classes of gametes produced in equal amounts YR = Yr = yR = yr green only true for genes on separate chromosomes round wrinkled Yr YyRr Yr 1 AP Biology yR : yR 1 YR : YR 1 yr : yr 1 Law of Independent Assortment Which stage of meiosis creates the law of independent assortment? Remember Mendel didn’t even know DNA —or genes— existed! AP Biology EXCEPTION If genes are on same chromosome will usually be inherited together Linkage The chromosomal basis of Mendel’s laws… Trace the genetic events through meiosis, gamete formation & fertilization to offspring AP Biology Linkage – Morgan used fruit flies Genes on the same chromosome are usually inherited together. Ex. red hair and freckles in humans Linked genes are changed by crossing over More crossing over occurs between genes that are far apart on the chromosome Chromosome maps are based on percentage of crossing over. AP Biology Chromosome maps Problem: What is the relative position of the genes ABCD on the chromosome if cross-over experiments show the following: (% of cross-over) A-B 40% ----20----- -----20----C-B 10% A D--10-- C--10-- B D-C 10% ------------40-------------D-B 20% A-D 20% Answer: ADCB or BCDA AP Biology Linkage and Crossing Over Example Tall, Yellow hybrids are crossed TtYy X TtYy If Linkage occurs (genes are on the same chromosome), you expect 75% Tall Yellow and 25% short green in the F2 If crossing over occurs, you expect most offspring to look like either parent, and a small number to have a different combination than the parents. AP Biology Mendel chose peas wisely Pea plants are good for genetic research available in many varieties with distinct heritable features with different variations flower color, seed color, seed shape, etc. Mendel had strict control over which plants mated with which each pea plant has male & female AP Biology structures pea plants can self-fertilize Mendel could also cross-pollinate plants: moving pollen from one plant to another Mendel chose peas luckily Pea plants are good for genetic research relatively simple genetically most characters are controlled by a single gene with each gene having only 2 alleles, one completely dominant over the other AP Biology Any Questions?? AP Biology 2006-2007