Download Supplementary File 6

Supplementary file 6
Putative miRNAs regulating milk protein genes
Gene
Symbol
Csn1sa
Csn1s2b
Csn2
Csn3
Lalba
Gene Title
Putative miRNAs
casein alpha s2-like A
(Csng)
mmu-let-7a; mmu-let-7d; mmu-let-7f; mmu-let-7g;
mmu-let-7i; mmu-miR-16; mmu-miR-27a; mmu-miR101a; mmu-miR-195; mmu-miR-196a; mmu-miR196b; mmu-miR-206; mmu-miR-1; mmu-miR-98.
mmu-miR-10a; mmu-miR-130a; mmu-miR-214
casein alpha s2-like B
(Csnd)
casein beta
casein kappa
lactalbumin, alpha
Cel
Muc1
carboxyl ester lipase
mucin 1,
transmembrane
Ltf
lactotransferrin
Egf
epidermal growth
factor
parathyroid hormonelike peptide
whey acidic protein
Pthlh
Wap
mmu-miR-335-5p
mmu-miR-351
mmu-let-7a; mmu-let-7b; mmu-let-7c; mmu-let-7d;
mmu-let-7e; mmu-let-7f; mmu-let-7g; mmu-let-7i;
mmu-miR-15b; mmu-miR-16; mmu-miR-23a; mmumiR-24; mmu-miR-195; mmu-miR-196a; mmu-miR199a-5p; mmu-miR-335-5p; mmu-miR-98
mmu-miR-99a; mmu-miR-125b-5p; mmu-miR-100
mmu-let-7a; mmu-let-7c; mmu-let-7d; mmu-let-7f;
mmu-let-7g; mmu-miR-199b*; mmu-miR-145; mmumiR-199a-5p
mmu-miR-19b; mmu-miR-130a; mmu-miR-152; mmumiR-214; mmu-miR-219
mmu-let-7g; mmu-miR-142-3p
mmu-miR-19b; mmu-miR-338-3p
mmu-miR-15b; mmu-miR-16; mmu-miR-195; mmumiR-100; mmu-miR-338-3p; mmu-miR-342-5p
Milk Fat Globule Membrane proteins
Plin2
Perilipin 2 (Adfp)
mmu-miR-15b; mmu-miR-24; mmu-miR-143
Mfge8
milk fat globule-EGF
mmu-miR-130a; mmu-miR-145; mmu-miR-206; mmufactor 8 protein
miR-214
Xdh
xanthine
mmu-miR-19b; mmu-miR-26a; mmu-miR-99a; mmudehydrogenase
miR-136; mmu-miR-219
;
Putative miRNAs regulating lipid synthesis genes
Gene
Gene Title
Symbol
Glucose Transport
Slc2a1
solute carrier family 2 (facilitated
(Glut 1)
glucose transporter), member 1
Slc2a8
solute carrier family 2, (facilitated
(Glut 8)
glucose transporter), member 8
Pentose phosphate shunt
G6pdx
glucose-6-phosphate
dehydrogenase X-linked
G6pd2
glucose-6-phosphate
dehydrogenase 2
Tkt
transketolase
Fatty acid and triglyceride synthesis
Aldoc
aldolase C, fructose-bisphosphate
Tpi1
triosephosphate isomerase 1
Pcx
pyruvate carboxylase
Slc25a8
Acly
Elovl1
Agpat1
Srebf1
Thrsp
Lpl
solute carrier family 25
(mitochondrial carrier, citrate
transporter), member 1
ATP citrate lyase
elongation of very long chain fatty
acids (FEN1/Elo2, SUR4/Elo3,
yeast)-like 1
1-acylglycerol-3-phosphate Oacyltransferase 1
(lysophosphatidic acid
acyltransferase, alpha)
sterol regulatory element binding
transcription factor 1
thyroid hormone responsive
SPOT14 homolog
lipoprotein lipase
Putative miRNAs
mmu-miR-152
mmu-miR-136
mmu-miR-16; mmu-miR-125b-5p;
mmu-miR-195; mmu-miR-1
mmu-miR-10a; mmu-miR-10b
mmu-miR-125b-5p; mmu-miR-100;
mmu-miR-351
mmu-miR-379
mmu-miR-25; mmu-miR-92a
mmu-let-7i; mmu-miR-196b; mmumiR-351; mmu-miR-379
mmu-miR-10b; mmu-miR-142-3p
mmu-miR-214
mmu-miR-27b; mmu-miR-30c; mmumiR-30d
mmu-miR-125b-5p; mmu-miR-143
mmu-miR-24; mmu-miR-142-3p
mmu-let-7a; mmu-let-7c; mmu-let-7d;
mmu-let-7e; mmu-let-7f; mmu-miR-24;
mmu-miR-98
mmu-miR-25; mmu-miR-133a; mmumiR-133b