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CURRICULUM VITAE NAME: Keqiang Wu (吳克強) EDUCATION 1980-1984 B.S., Biology, Sun Yat-Sen University, Guangzhou, China 1984-1987 M.S., Genetics, Institute of Genetics, Academy of Science, Beijing, China 1990-1994 Ph.D., Molecular Biology, University of Saskatchewan, Canada PROFESSIONAL APPOINTMENTS 1994-1995 Postdoctoral Research Associate, DOE Plant Research Lab, Michigan State University, USA 1996-1997 Postdoctoral Research Associate, Department of Medicine, McGill University, Canada 1998-2001 Research Scientist, Eastern Cereal and Oilseed Research Center, Agriculture and Agri- Food Canada, Canada. 2001-2006 Assistant Professor, Department of Biology, West Virginia University, USA 2006-2012 Associate Professor, Institute of Plant Biology, National Taiwan University, Taiwan 2012-present Professor, Institute of Plant Biology, National Taiwan University, Taiwan PROFESSIONAL ACTIVITIES Editorial Board of PLoS ONE (2011-present) Guest editor of Frontiers in Plant Science (2013-2014) Member of American Society of Plant Biologist AWARDS • Graduate Scholarship, University of Saskatchewan, Canada (1990-1994) • Postdoctoral Fellowship, Michigan State University, USA (1994-1995) • Postdoctoral Fellowship, McGill University, Canada (1996-1997) • Travel Award of American Society of Plant Biologist (2005) • K. C. Wong visiting scholar, K. C. Wong Education Foundation and Chinese Academy of Science (2006) • Excellent publication award of National Taiwan University (2008-2014) • Excellent research award of National Taiwan University (2010-2014) • Excellent research award of Ministry of Science and Technology, Taiwan (2013) PUBLICATIONS Peer-reviewed Journals: 1) Singh P, Yekondi S, Chen PW, Tsai CH, Yu CW, Wu K, Zimmerli L*(2014) Environmental history modulates Arabidopsis pattern-triggered immunity in a HISTONE ACETYLTRANSFERASE1-dependent manner. Plant Cell 26:26762688. 2) Liu X, Yang S, Zhao M, Luo M, Yu CW, Chen C, Tai R, and Wu K* (2014) Transcriptional repression by histone deacetylases in plants. Mol Plant 7, 764–772. 3) Luo M, Hung F, Yang S, Liu X, and Wu K* (2014) Histone lysine demethylases and their functions in plants. Plant Mol Biol Rep 32:558–565. 4) Yuan L, Liu X, Luo M, Yang S, and Wu K* (2013) Involvement of Histone Modifications in Plant Abiotic Stress Responses. J Integr Plant Biol 55: 892-901. 5) Liu X, Chen C, Wang K, Luo M, Tai R, Yuan L, Zhao M, Yang S, Tian G, Cui Y, Hsieh H and Wu K* (2013) PHYTOCHROME INTERACTING FACTOR3 associates with the Histone Deacetylase HDA15 in repression of chlorophyll biosynthesis and photosynthesis in etiolated Arabidopsis seedlings. Plant Cell 25: 1258–1273. 6) Zhou Y, Tan B, Luo M, Lin Y, Liu C, Chen C, Yu C-Wu, Yang S, Dong S, Ruan J, Yuan L, Zhang Z, Zhao L, Li C, Chen H, Cui Y, Wu K* and Huang S* (2013) HISTONE DEACETYLASE19 interacts with HSL1 and participates in the repression of seed maturation genes in Arabidopsis seedlings. Plant Cell 25: 134– 148. 7) Luo M, Yu CW, Chen F, Zhao L, Tian G, X Liu, Cui Y, Yang JY, and Wu K* (2012) Histone deacetylase HDA6 is functionally associated with AS1 in repression of KNOX genes in Arabidopsis. PLoS Genet 8: e1003114. doi: 10.1371/journal.pgen.1003114. 8) Luo M, Wang YY, Liu X, Yang S, Lu Q, Cui Y, and Wu K* (2012) HD2C interacts with HDA6 and is involved in ABA and salt stress response in Arabidopsis. J. Exp. Bot. 63: 3297-3306. 9) Alinsug MV, Chen F, Luo M, Tai R, Jiang L and Wu K* (2012) Subcellular localization of class II HDAs in Arabidopsis thaliana: nucleocytoplasmic shuttling of HDA15 is driven by light. PLoS ONE 7(2): e30846. 10) Liu X, Yu CW, Dun J, Luo M, Wang K, Tian G, Cui Y, and Wu K* (2012) HDA6 directly interacts with DNA methyltransferase MET1 and maintains transposable elements silencing in Arabidopsis. Plant Physiol. 158: 119–129. 11) Liu X, Luo M, Zhang W, Zhao J, Zhang J, Wu K*, Tian L* and Duan J* (2012) Histone acetyltransferases in rice (Oryza sativa L.): phylogenetic analysis, subcellular localization and expression. BMC Plant Biology 12:145. doi:10.1186/1471-2229-12-145 12) Gao Y, Yang S, Yuan L, Cui Y, and Wu K* (2012) Comparative analysis of SWIRM domain-containing proteins in plants. Comp. Funct. Genomics 2012:310402. 13) Luo M, Wang Y, Liu X, Yang S, Wu K*, (2012) HD2 proteins interact with RPD3-type histone deacetylases. Plant Signal Behav. 7: 608 – 610. 14) Liu X, Luo M, and Wu K*(2012) Epigenetic interplay of histone modifications and DNA methylation mediated by HDA6. Plant Signal Behav. 7: 633 – 635 15) Luo M, Liu X, Singh P, Cui Y, Zimmerli L, and Wu K* (2012) Chromatin modifications and remodeling in plant abiotic stress responses. BBA-Gene Regul Mech. 1819:129-136. 16) Zhou Y, Chu P, Chen H, Li Y, Liu J, Ding Y, Tsang EW, Jiang L, Wu K, and Huang S. (2012) Overexpression of Nelumbo nucifera metallothioneins 2a and 3 enhances seed germination vigor in Arabidopsis. Planta (2012) 235:523–537 2 17) Yu CW, Liu X, Luo M, Chen C, Lin X, Tian G, Lu Q, Cui Y, and Wu K* (2011) Histone Deacetylase6 interacts with Flower Locus D and regulates flowering in Arabidopsis. Plant Physiol. 156: 173-184. 18) Chen L and Wu K* (2010) Role of histone deacetylases HDA6 and HDA19 in ABA and abiotic stress response. Plant Signal Behav. 5: 1318-1320. 19) Chen L, Luo M, Wang Y and Wu K* (2010) Involvement of Arabidopsis histone deacetylase HDA6 in ABA and salt stress response. J. Exp. Bot. 61: 3345-3353. 20) Song Y, Wu K, Dhaubhade S, An L and Tian L (2010) Arabidopsis DNA methyltransferase AtDNMT2 associates with histone deacetylase AtHD2s activity. Biochem. Biophys. Res. Commun. 396:187-192. 21) Fu G, Zhong Y, Li C, Li Y , Lin X, Liao B, Tsang E WT, Wu K*, Huang S (2010) Epigenetic regulation of peanut allergen gene Ara h 3 in developing embryos. Planta 231: 1049-1060. 22) Li C, Wu K, Fu G, Li Y, Zhong Y, Lin X, Zhou Y, and Huang S (2009) Regulation of oleosin expression in developing peanut embryos through nucleosome loss and histone modifications. J. Exp. Bot. 60: 4371-4382. 23) Alinsug MV, Yu C-W and Wu K* (2009) Phylogenetic analysis, subcellular localization, and expression patterns of RPD3/HDA1 family histone deacetylases in plants. BMC Plant Biol. 9: 37. doi: 10.1186/1471-2229-9-37. 24) Wu K*, Zhang L, Zhou C, Yu C, and Chaikam V (2008) HDA6 is required for jasmonate response, senescence and flowering in Arabidopsis. J. Exp. Bot. 59: 225–234. 25) Liu Z, Zhou C and Wu K* (2008) Creation and analysis of a novel chimeric promoter for the complete containment of pollen- and seed-mediated gene flow. Plant Cell Rep. 27:995–1004 26) Ciou C, Wu K Yeh K (2008) Characterization and promoter activity of chromoplast specific carotenoid associated gene (CHRC) from Oncidium gower ramsey. Biotechnology Letters 30:1861-1866. 27) Fu W, Wu K* and Duan J (2007) Sequence and expression analysis of histone deacetylases in rice. Biochem. Biophys. Res. Commun. 356:843-850. 28) Sridha S and Wu K* (2006) Identification of AtHD2C as a novel regulator of abscisic acid responses in Arabidopsis. Plant J. 46: 124-133. 29) Zhou C, Zhang L, Duan J, Miki B and Wu K* (2005) HDA19 is involved in jasmonic acid and ethylene signalling of pathogen-response in Arabidopsis. Plant Cell 17: 1196–1204. 30) Yang Z., Tian L., Latoszek-Green M., Brown D. and Wu K.* (2005) Arabidopsis ERF4 is a transcriptional repressor capable of modulating ethylene and abscisic acid responses. Plant Mol. Biol. 58:585-596. 31) Yan Y., Lin X., Zhang Y., Wang L., Li Y., Wu K. and Huang S (2005) Isolation of peanut cDNAs encoding arachins and conglutins by expressed sequence tags. Plant Sci. 169: 439-445. 32) Tian L., Wu K., Hannam C., Latoszek-Green M., Sibbald S., Hu M., Brown D., and Miki B (2005) Analysis of eIF4A promoter elements for expression in plants. J. Plant Physiol. 162: 1355-1366. 3 33) Zhou C., Labbe H., Sridha S., Wang L., Tian L., Latoszek-Green M., Yang Z., Brown D.,Miki B., and Wu K.* (2004) Expression and function of HD2-type histone deacetylases in Arabidopsis development. Plant J. 38: 715-724. 34) Zhou C., Miki B., and Wu K.* (2003) CHB2, a member of the SWI3 gene family, is a global regulator in Arabidopsis. Plant Mol. Biol. 52: 1125-1134. 35) Wu K,* Tian L., Zhou C., Brown D., and Miki B. (2003) Repression of gene expression by Arabidopsis HD2 histone deacetylases. Plant J. 34: 241-247. 36) Wu K., Hu M., Martin T., Wang C., Li X., and Miki B. (2003) The cryptic enhancer elements of the tCUP promoter. Plant Mol. Biol. 51: 351-362. 37) Tian L., Wu K., Ouellet T., Foster E., Latoszek-Green M., Sibbald S., Miki B., Seguin and Brown D. (2003) Activity of elements from the tobacco cryptic promoter, tcup, in conifer tissues. In Vitro Cell Devel Biol - Plant 39:193-202. 38) Wu K., Tian L., Hollingsworth J., Brown D. and Miki B. (2002) Functional analysis of tomato Pti4 gene in Arabidopsis. Plant Physiol. 128: 30-37. 39) Miki B., Brown D., Tian L., Malik K., and Wu K. (2002) The role of histone deacetylases in flowering. Flowering Newsletter 33: 3-6. 40) Tian L., Wang, H., Wu K., Latoszek-Green M., Hu M., Miki B., and Brown D. (2002) Efficient recovery of transgenic plants through organogenesis and embryogenesis using a cryptic promoterto drive marker gene expression. Plant Cell Rep. 20:1181-1187. 41) Malik K., Wu, K., Li, X., Martin-Heller, T., Hu, M., Foster, L., Tian L., Jordan, M., Brown, D., Gleddie, S., Simmonds, D., Zheng, S., Simmonds, J., and Miki, B. (2002) A constitutive gene expression system derived from the tCUP cryptic gene regulatory elements. Theor. Appl. Genet. 105: 505-514. 42) Akache B., Wu K. and Turcotte B. (2001) Phenotypic analysis of genes encoding yeast zinc cluster proteins. Nucleic Acids Res. 29: 2181-2190. 43) Wu K., Malik K., Tian L., Hu M., Martin T., Foster L., Brown D. and Miki B. (2001) Enhancers and core promoter elements are essential for the activity of a cryptic gene activation sequence from tobacco, tCUP. Mol. Genet. Genomics 265: 763-770. 44) Wu K., Tian L., Malik K., Brown D. and Miki B. (2000) Functional analysis of HD2 histone deacetylase homologs in Arabidopsis thaliana. Plant J. 20: 19-28. 45) Wu K., Malik K., Tian L., Brown D. and Miki B. (2000) Functional analysis of a RPD3 histone deacetylase homolog in Arabidopsis thaliana. Plant Mol. Biol. 44: 167-176. 46) Wu K., Li L., Gage D. and Zeevaart J. (1996) Molecular cloning and photoperiod-regulated expression of gibberellin 20-oxidase from long-day plants spinach. Plant Physiol. 110: 547-554. 47) Xu Y., Li L., Wu K., Peeters A., Gage D. and Zeevaart J. (1995) GA5 locus of Arabidopsis encodes a multifunctional gibberellin 20-oxidase: molecular cloning and functional expression. Proc. Natl. Acad. Sci. USA 92: 6640-6644 48) Wu K., Cossins E. and King J. (1994) Folate metabolism in Datura innoxia. In vivo and in vitro folylpolyglutamate synthesis in wild-type and methotrexateresistant cells. Plant Physiol. 104: 373-380. 4 49) Wu K., Mourad G. and King J. (1994) A valine-resistant mutant of Arabidopsis displays an acetolactate synthase with changed feedback control. Planta 192: 249255. 50) Wu K. and King J. (1994) Biochemical and genetic characterization of 5-Fluoro2'-deoxyuridine resistant mutants of Arabidopsis. Planta 197: 117-122. 51) Wu K., Atkinson I., Cossins E. and King J. (1993) Methotrexate resistance in Datura innoxia. Uptake and metabolism of methotrexate in wild type and resistant cells. Plant Physiol. 101: 477-483. *Corresponding author Book Chapters: 1) Miki B. and Wu K. (2003) Control of gene expression by histone deacetylases. In “Plant Biotechnology 2002 and Beyond”, I. K. Vasil, ed., Kluwer Academic Publishers, Dordrecht, Netherlands, pp. 211-214. 2) Zhang C-Q., Liu Y., Eschen W.M., and Wu K. (2003) Identifying regulatory signals in DNA-sequences with a non-statistical approximation approach. In “Proceeding of the 2003 IEEE Bioinformatics Conference”. pp., 593-597. PATENT B Miki, T Ouellet, J Hattori, E Foster, H Labbé, T Martin-Heller, L Tian, D Brown, P Zhang, K Wu. Cryptic regulatory elements obtained from plants. US Patent # 7,303,873. (issued Dec 4, 2007). Simmonds, J., Cass, L., Harris L., Allard S., Malik, K., Martin-Heller, T., Brown, D., Hu, M., Miki, B., Wu, K. Regulatory region of a lipid transfer protein (LtpW1) from aleuron tissue of wheat. US Patent # 6,939,958 (issued Sept. 6, 2005). Wu, K., Miki, B., Tian, L., Brown, D. Repressing gene expression in plants. US Patent # 6,808,926 (issued October 26, 2004). Ouellet, T., Miki, B.M., Martin-Heller, T., Tian, L., Brown, D.C., Zhang, P., Hattori, J., Malik, K., Wu, K., Theilmann, D.A., Tropiano, R. Translation regulatory elements. US Patent # 6,784,289 (issued Aug. 31, 2004). 5