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TORTORA • FUNKE • CASE Microbiology AN INTRODUCTION EIGHTH EDITION B.E Pruitt & Jane J. Stein Chapter 11 The Prokaryotes: Domains Bacteria and Archaea PowerPoint® Lecture Slide Presentation prepared by Christine L. Case Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings The Prokaryotes: Domains Bacteria and Archaea • One circular chromosome, not in a membrane • No histones • No organelles • Peptidoglycan cell walls • Binary fission Learning objective: Make a dichotomous key to distinguish among the proteobacteria described in this chapter. Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Bergey’s Manual • Categorizes bacteria into taxa based upon rRNA sequences • Lists identifying characteristics like: • Gram stain reaction • cellular morphology • oxygen requirements • nutritional properties • Prokaryotes classified into two domains: • Bacteria • Archaea Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Domain Bacteria • Bacteria essential to life on earth • Proteobacteria • Mythical Greek god, Proteus, who could assume many shapes • Gramnegative Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings The (alpha) Proteobacteria • Human pathogens: • Bartonella • B. hensela Cat-scratch disease • Brucella Brucellosis Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings The (alpha) Proteobacteria • Includes nitrogen-fixing bacteria, chemoautotrophs, and chemoheterotrophs • Obligate intracellular parasites: • Ehrlichia. Tick-borne, ehrlichiosis • Rickettsia. Arthropod-borne, spotted fevers • R. prowazekii Epidemic typhus • R. typhi Endemic murine typhus • R. rickettsii Rocky Mountain Spotted Fever Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings The (alpha) Proteobacteria Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Figure 11.1 The (alpha) Proteobacteria • Wolbachia. Live in insects and other animals • In an infected pair, only female hosts can reproduce • “Popcorn” strain causes host cells to lyse • Possible biological control of insects Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings The (alpha) Proteobacteria • Have prosthecae: • Caulobacter. Stalked bacteria found in lakes • Hyphomicrobium. Budding bacteria found in lakes Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Figure 11.2 & 3 The (alpha) Proteobacteria • Plant pathogen: • Agrobacterium. Insert a plasmid into plant cells, inducing a tumor Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Figure 9.17 The (alpha) Proteobacteria • Chemoautotrophic: • Oxidize nitrogen for energy • Fix CO2 • Nitrobacter. NH3+ NO2– • Nitrosomonas. NO2– NO3– Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings The (alpha) Proteobacteria • Nitrogen-fixing bacteria: • Azospirillum • Grow in soil, using nutrients excreted by plants • Fix nitrogen • Rhizobium • Fix nitrogen in the roots of plants Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Figure 27.5 The (alpha) Proteobacteria • Produce acetic acid from ethyl alcohol: • Acetobacter • Gluconobacter Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings The (beta) Proteobacteria Learning objective: Make a dichotomous key to distinguish among the -proteobacteria described in this chapter. Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings The (beta) Proteobacteria • Thiobacillus • Chemoautotrophic, oxidize sulfur: H2S SO42– • Sphaerotilus • Chemoheterotophic, form sheaths Sphaerotilus natans: •Sheathed bacteria found in dilute sewage and aquatic environs Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Figure 11.5 The (beta) Proteobacteria • Spirillum volutans: • Chemoheterotrophic, helical • Note polar flagella • Neisseria • Chemoheterotrophic, cocci • N. meningitidis • N. gonorrhoeae (diplococci) – fimbriae attach to mucous membranes for greater pathogenicity Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Figure 11.4 & 6 The (beta) Proteobacteria • Bordetella • Chemoheterotrophic, rods • B. pertussis (pertussis or whooping cough) • Burkholderia. Nosocomial infections (hospital infection) • Extraordinary nutritional spectrum, able to degrade > 100 different organic molecules, can grow in disinfectant! • Zoogloea. Slimy masses in aerobic sewage-treatment processes – essential to sewage treatment Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings The (gamma) Proteobacteria Learning objective: Make a dichotomous key to distinguish among the proteobacteria described in this chapter. Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings The (gamma) Proteobacteria • Pseudomonadales: • Pseudomonas • Gram - • Opportunistic pathogens • Metabolically diverse • Polar flagella (characteristic, as in picture) • Azotobacter and Azomonas. Nitrogen fixing • Moraxella. Conjunctivitis Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Figure 11.7 The (gamma) Proteobacteria • Legionellales: • Legionella • Found in streams, warm-water pipes, cooling towers of air-conditioning • L. pneumophilia (Legionnaire's) • Coxiella • Q fever transmitted via aerosols or milk Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Coxiella burnetii Figure 24.15b The (gamma) Proteobacteria • Vibrionales: • Found in coastal water • Vibrio cholerae causes cholera • Slight curvature of rods • V. parahaemolyticus causes gastroenteritis (raw/undercooked shellfish) Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Figure 11.8 The (gamma) Proteobacteria • The (gamma) Proteobacteria • Enterobacteriales (enterics – intestinal tracts): • Peritrichous flagella, facultatively anaerobic • Enterobacter • Erwinia • Escherichia • Klebsiella • Proteus • Salmonella • Serratia • Shigella • Yersinia Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings The (gamma) Proteobacteria Proteus mirabilis – swarmer due to multiple flagella Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Figure 11.9a, b The (gamma) Proteobacteria • Pasteurellales: • Non-motile • Human and animal pathogens • Pasteurella • Cause pneumonia and septicemia • Haemophilus • Require X factor (heme) and V factor (NAD+, NADP+) factors from blood hemoglobin • H. influenzae – several important diseases (meningitis, earaches, epiglotitis, bronchitis, etc.) Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings The (gamma) Proteobacteria • Beggiatoa • Chemoautotrophic, oxidize H2S to S0 for energy • Interface between aerobic and anaerobic layers in aquatic sediments • Factor in discovery of of autotrophic metabolism • Francisella • Chemoheterotrophic, tularemia Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings The (delta) Proteobacteria Learning objective: Make a dichotomous key to distinguish among the proteobacteria described in this chapter. Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings The (delta) Proteobacteria • Bdellovibrio. Prey on other bacteria • Desulfovibrionales. Use S instead of O2 as final electron acceptor (sulfur reducing) • Releases tons of H2S into atmosphere, key part in sulfur cycle • Myxococcales. Gliding. Cells aggregate to form myxospores (stalked fruiting body – 2nd slide next) • Leave behind a slime trail (next slide) • Nutrition from bacteria they encounter Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings The (delta) Proteobacteria Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Figure 11.10a The (delta) Proteobacteria Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Figure 11.1b The (epsilon) Proteobacteria Learning objective: Make a dichotomous key to distinguish among the proteobacteria described in this chapter. Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings The (epsilon) Proteobacteria • Helicobacter • Multiple flagella • Peptic ulcers • Stomach cancer • Campylobacter • One polar flagellum • Gastroenteritis Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Figure 11.1a Helicobacter pylori: Example of a helical bacterium that doesn’t make a complete twist (different from spirochetes) Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings The Nonproteobacteria Gram-Negative Bacteria Learning objective: Make a dichotomous key to distinguish among the gramnegative nonproteobacteria described in this chapter. Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Cyanobacteria • Oxygenic photosynthesis • Once called blue-green algae • Water species have gas vacuoles for buoyancy • Gliding motility • Fix nitrogen in heterocysts • Played important part in development of life on earth, producing oxygen atmosphere Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Cyanobacteria Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Figure 11.12a-c Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Purple and Green Photosynthetic Bacteria Learning objective: Compare and contrast purple and green photosynthetic bacteria with cyanobacteria • Anoxygenic photosynthesis • Purple and green sulfur bacteria (bottom formula) 2H2O + CO2 2H2S + CO2 light light Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings (CH2O) + H2O + O2 (CH2O) + H2O + 2S0 Purple sulfur bacteria: intracellular sulfur granules (multicolored refractile objects (anoxygenic photoautotrophs) Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Firmicutes • Low G + C Learning objective: • Gram-positive Make a dichotomous key to distinguish among the low G + C gram-positive described in this chapter. Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Clostridiales • Clostridium • Endosporeproducing • Obligate anaerobes • Endospores usually distend the cell wall • Epulopiscium • Very large, shown on the head of a pin • rRNA determined placement with prokaryotes Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Figure 11.14 & 15 Bacillales • Bacillus • Endospore-producing rods • B. anthracis - anthrax Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Figure 11.16b Bacillales • Staphylococcus aureus • Cocci in grapelike clusters • Gram-positive, produces enterotoxin • Grow fairly well under high osmotic pressure and low moisture (nasal secretions, skin, ham and other cured meats) Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Figure 1.17 Lactobacillales • Generally aerotolerant anaerobes, lack an electron-transport chain Streptococcus – many of spherical cells are dividing and somewhat oval • Lactobacillus – lacticacid producing • Streptococcus – more illnesses and diseases than any other bacteria group • Enterococcus – intestinal tract, oral cavity • Listeria – contaminates dairy Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Figure 11.18 Mycoplasmatales • Mycoplasma pneumoniae • No cell walls • Pleomorphic (irregular cells) • Arrows indicate terminal structures that likely aid attachment to eukaryotic cells • 0.1 - 0.24 µm • Filamentous growth of M. pneumoniae • Reproduces by fragmentation of the filaments Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Figure 11.19a, b Actinobacteria • High G + C Learning objective: • Gram-positive Make a dichotomous key to distinguish among the high G + C gram-positive described in this chapter. Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Actinobacteria • Actinomyces • Corynebacterium • Frankia • Gardnerella • Mycobacterium • Nocardia • Propionibacterium • Streptomyces Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Figure 11.20b • Streptomyces – • Filamentous branching growth with asexual reproductive conidiospores at tips • Make up much of soil bacteria Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Actinomyces – notice branched filamentous morphology Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Chlamydiae • C. trachomatis • Trachoma • STD, urethritis • C. pneumoniae • C. psittaci • Causes psittacosis Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Generalized life cycle of Chlamydia (48 hours) Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Figure 11.22a Generalized life cycle of Chlamydia Elementary bodies – infectious stage Reticulate bodies – reproduce in host cell Intermediate bodies – stage in between Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Figure 11.22b Spirochaetes • Borrelia Spirochetes – • Leptospira •Helical, axial filaments under outer sheath • Treponema •Move by corkscrewlike rotation Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Figure 11.23 Phyla Bacteroidetes & Fusobacteria • Anaerobic • Bacteroides. In mouth and large intestine • Cytophaga. Cellulose-degrading in soil • Fusobacterium • Found in mouth • May be involved in dental diseases Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Domain Archaea • Hyperthermophiles (heat) • Pyrodictium • Sulfolobus Archaea – Pyrodictium abyssi: •Deep ocean, 110 degrees C •Cells disk-shaped with network of tubules (cannulae) • Methanogens (methane) • Methanobacterium • Extreme halophiles (salt) • Halobacterium Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Figure 11.25 Microbial Diversity Thiomargarita namibiensis: •Energy from reduced sulfur compounds • Bacteria size range • Thiomargarita (750 µm) to nanobacteria (0.02 µm) in rocks Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Figure 11.26 Microbial Diversity • Few of the total number of prokaryotes have been isolated and identified • PCR indicates up to 10,000 bacteria/gm of soil. Many bacteria have not been identified or characterized because they: • Haven't been cultured • Need special nutrients • Are part of complex food chains requiring the products of other bacteria • Need to be cultured to understand their metabolism and ecological role Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings