Download Lista delle Publicazioni

Lista delle Publicazioni
Mario Francesco Pavone
International Journals
M. Pavone, G. Narzisi, G. Nicosia “Clonal Selection - An Immunological Algorithm for Global
Optimization over Continuous Spaces”, Journal of Global Optimization, Vol. 53, No. 4, pp. 769808, 2012.
V. Cutello, G. Nicosia, M. Pavone “Protein Multiple Sequence Alignment by Hybrid Immunological
Algorithms”, Nucleic Acids Research, Oxford Journals, Vol. 39, No. 6, pp. 1980-1992, 2011.
V. Cutello, G. Morelli, G. Nicosia, M. Pavone and G. Scollo, “On Discrete Models and
Immunological Algorithms for Protein Structure Prediction”, Natural Computing Journal, special
issue on Modelling Bioprocesses, Vol. 10, No. 1, pp. 91-102, 2011 (a Review Paper).
V. Cutello, G. Nicosia, M. Pavone, “An Immune Algorithm with Stochastic Aging and Kullback
Entropy for the Chromatic Number Problem”, Journal on Combinatorial Optimization, Vol. 14, No.
1, pp. 9-33, 2007.
V. Cutello, G. Nicosia, M. Pavone, J. Timmis “An Immune Algorithm for Protein Structure
Prediction”, IEEE Transaction on Evolutionary Computation, Vol. 11, No. 1, pp. 101-117, 2007.
Refereed Conference/Workshop Proceedings
P. Consoli, and M. Pavone, “O-BEE-COL: Optimal BEEs for COLoring Graphs”, Biennial
International Conference on Artificial Evolution (EA 2013), LNCS, Bordeaux, France, October 2123, 2013.
P. Consoli, A. Collerà, and M. Pavone, “Swarm Intelligence Heuristics for Graph Coloring
Problem”, IEEE Congress on Evolutionary Computation (CEC 2013), Vol. 1, pp. 1909-1916,
Cancún, México, June 20-23, 2013. IEEE Press.
V. Cutello, A. G. De Michele, and M. Pavone, “Escaping Local Optima via Parallelization and
Migration”, 6th International Workshop on Nature Inspired Cooperative Strategies for
Optimization (NICSO 2013), Studies in Computational Intelligence, Vol. 512, pp. 141-152,
Canterbury, UK, September 2-4, 2013.
A. G. De Michele, and M. Pavone, “Multi-Threaded Genetic Algorithm for Escaping Local
Optima”, 4th International Conference on Metaheuristics and Nature Inspired Computing (META
2012), Port El-Kantaoiui, tunisia, october 27-31, 2012.
D. Agostini, J. Costanza, V. Cutello, L. Zammataro, N. Krasnogor, M. Pavone, and G. Nicosia,
“Effective Calibration of Artificial Gene Regulatory Networks”, 20th European Conference on
Artificial Life (ECAL 2011), pp. 39-46, MIT Press, Paris, France, August 8-12, 2011.
G. Stracquadanio, R. Umeton, J. Costanza, V. Annibali, R. Mechelli, M. Pavone, L. Zammataro,
and G. Nicosia, “Large Scale Agent-Based Modeling of the Humoral and Cellular Immune
Response”, 10th International Conference on Artificial Immune Systems (ICARIS 2011), LNCS
6825, pp. 15-29, Springer-Verlag, Cambridge, UK, July 18-21, 2011.
J. Costanza, V. Cutello, and M. Pavone, “A Memetic Immunological Algorithm for Resource
Allocation Problem”, 10th International Conference on Artificial Immune Systems (ICARIS 2011),
LNCS 6825, pp. 308-320, Springer-Verlag, Cambridge, UK, July 18-21, 2011.
M. Pavone, “P system Reverse Engineering for Gene Regulatory Networks in S-system Models”,
8th International Conference on Complex Systems (ICCS 2011), New England Complex Systems
Institute, pp. 492-503, Quincy, MA, USA, June 26 - July 1, 2011.
V. Cutello, G. Nicosia, M. Pavone, and G. Stracquadanio “Entropic Divergence for Population
Based Optimization Algorithms”, IEEE World Congress on Computational Intelligence (WCCI
2010), Barcelona, Spain, July 18-23, 2010. IEEE Press.
V. Cutello, G. Nicosia, M. Pavone and G. Stracquadanio, “An Information Theoretic Approach for
Clonal Selection Algorithms”, 9th International Conference on Artificial Immune Systems (ICARIS
2010), Lecture Notes in Computer Science, Vol. 6209, pp. 144-157, Edinburgh, UK, July 26-29,
2010.
V. Cutello, G. Nicosia, M. Pavone, I. Prizzi, “Proteomic Multiple Sequence Aligments: Refinement
using an Immunological Local Search”, Applied and Industrial Mathematics in Italy II (SIMAI),
series on Advances in Mathematics for Applied Sciences, Vol. 75, pp. 291-302, World Scientific,
2007.
V. Cutello, N. Krasnogor, G. Nicosia, M. Pavone “Immune Algorithm versus Differential
Evolution: a Comparative Case Study using High Dimensional Function Optimization”,
International Conference on Adaptive and Natural Computing Algorithms (ICANNGA), Lecture
Notes in Computer Science, Vol. 4431, pp. 93-101, Warsaw, Poland, 11-14 April, 2007.
V. Cutello, D. Lee, G. Nicosia, M. Pavone, I. Prizzi, “Aligning Multiple Protein Sequences by
Hybrid Clonal Selection Algorithm with Insert-Remove-Gaps and BlockShuffling Operators”, 5th
International Conference on Artificial Immune Systems (ICARIS), Lecture Notes in Computer
Science, Vol. 4163, pp. 321-334, Instituto Gulbenkian de Ciência, Oeiras, Portugal, September 4-6,
2006.
V. Cutello, D. Lee, S. Leone, G. Nicosia, M. Pavone, “Clonal Selection Algorithm with Dynamic
Population Size for Bimodal Search Spaces”, 2nd International Conference on Natural Computation
(ICNC), Lecture Notes in Computer Science, Vol. 4221, pp. 949-958, Xi'an, China, September 2428, 2006.
V. Cutello, G. Narzisi, G. Nicosia, M. Pavone “Real Coded Clonal Selection Algorithm for Global
Numerical Optimization using a new Inversely Proportional Hypermutation Operator”, 20th ACM
Symposium on Applied Computing (SAC), ACM vol. 2, pp. 950-954, Dijon, France, April 23-27,
2006.
V. Cutello, G. Narzisi, G. Nicosia, M. Pavone, “An Immunological Algorithm for Global Numerical
Optimization”, 7th International Conference on Artificial Evolution (EA), Lecture Notes in
Computer Science, Vol. 3871, pp. 284-295, Lille, France, October 26-28, 2005.
V. Cutello, G. Narzisi, G. Nicosia, M. Pavone, “Clonal Selection Algorithms: A Comparative Case
Study using Effective Mutation Potentials”, 4th International Conference on Artificial Immune
Systems, ICARIS 2005, Lecture Notes in Computer Science, Vol. 3627, pp. 13-28, Banff, Alberta,
Canada, August 14-17, 2005.
V. Cutello, G. Morelli, G. Nicosia, M. Pavone, “Immune Algorithms with Aging Operators for the
String Folding Problem and the Protein Folding Problem”, 5th European Conference on
Evolutionary Computation in Combinatorial Optimization, EVOCOP 2005, Lecture Notes in
Computer Science, Vol. 3448, pp. 80-90, Lausanne, Switzerland, March 30 – April 1, 2005.
V. Cutello, G. Nicosia, M. Pavone, “Exploring the Capability of Immune Algorithms: A
Characterization of Hypermutation Operators”, 3rd International Conference on Artificial Immune
Systems, ICARIS 2004, Lecture Notes in Computer Science, Vol. 3239, pp. 263-276, Catania, Italy,
September 13-16, 2004.
V. Cutello, G. Narzisi, G. Nicosia, M. Pavone, G. Sorace, “How to Escape Traps Using Clonal
Selection Algorithms”, 1st International Conference on Informatics in Control, Automation and
Robotics, ICINCO 2004, INSTICC Press, Vol. 1, pp. 322-326, Setúbal, Portugal, August 25-28,
2004 (poster).
V. Cutello, G. Nicosia, M. Pavone, “An Immune Algorithm with Hyper-Macromutations for the
Dill's 2D Hydrophobic-Hydrophilic Model”, 2004 IEEE Congress on Evolutionary Computation,
CEC 2004, IEEE Press, Vol. 1, pp. 1074-1080, Portland, Oregon, June 19-20, 2004.
V. Cutello, G. Nicosia, M. Pavone, “A Hybrid Immune Algorithm with Information Gain for the
Graph Coloring Problem”, Genetic and Evolutionary Computation COnference, GECCO 2003,
Lecture Notes in Computer Science, Vol. 2723, pp. 171-182, Chicago, Illinois, July 12-16, 2003.
A. Cincotti, V. Cutello, M. Pavone, “Graph Partitioning with Genetic Algorithms using ODPX”,
2002 IEEE Congress on Evolutionary Computation, CEC 2002, IEEE Press, pp. 402-406,
Honolulu, Hawaii, May 12-17, 2002.
A. Cincotti, V. Cutello, F. Pappalardo, M. Pavone: “GPEG: Graph Partitioning using evolutionary
games”, Proceedings of the 9th International Conference on Information Processing and
Management of Uncertainly in Knowledge-Based Systems, IPMU 2002, Vol. 2, pp.817-821,
Annecy, France, July 1-5, 2002.
Editorials
C. A. Coello Coello, G. Franco, N. Krasnogor, and M. Pavone, Editorial: Algorithms & Models for
Complex Natural Systems, special issue on Natural Computing, 2014 (to appear).
M. Pavone, and C. A. Coello Coello, Editorial: Optimization on Complex Systems, special issue on
Memetic Computing, Vol. 4, No. 3, pp. 163-164, 2012.
N. Krasnogor, G. Nicosia, M. Pavone, and D.A. Pelta, Editorial: Nature Inspired Cooperative
Strategies for Optimization, special issue on Natural Computing, Vol. 9, No. 1, pp. 1-3, 2010.
Book and Journal coedited
P. Liò, O. Miglino, G. Nicosia, S. Nolfi and M. Pavone, “Advances in Artificial Life – ECAL
2013”, proceedings of the 12th European Conference on Artificial Life, MIT Press, 2013.
C. A. Coello Coello, V. Cutello, K. Deb, S. Forrest, G. Nicosia, and M. Pavone, “12th International
Conference on Parallel Problem Solving from Nature – PPSN 2012”, Lecture Notes in Computer
Science - Part I, Vol. 7491, Springer-Verlag, 2012.
C.A. Coello Coello, V. Cutello, K. Deb, S. Forrest, G. Nicosia, and M. Pavone, “12th International
Conference on Parallel Problem Solving from Nature – PPSN 2012”, Lecture Notes in Computer
Science - Part II, Vol. 7492, Springer-Verlag, 2012.
M. Pavone, and C. A. Coello Coello, “Optimization on Complex Systems”, Memetic Computing,
Vol. 4, issue 3, 2012.
C. A. Coello Coello, J. Greensmith, N. Krasnogor, P. Liò, G. Nicosia, and M. Pavone, “11th
International Conference on Artificial Immune Systems – ICARIS 2012”, Lecture Notes in
Computer Science, Vol. 7597, Springer-Verlag, 2012.
N. Krasnogor, G. Nicosia, M. Pavone, D. Pelta, “Nature Inspired Cooperative Strategies for
Optimization”, Natural Computing, Vol. 8, issue 4, 2009.
N. Krasnogor, G. Nicosia, M. Pavone, D. Pelta, “2nd International Workshop on Nature Inspired
Cooperative Strategies for Optimization – NICSO2007”, book series on Studies in Computational
Intelligence, Vol. 129, Springer-Verlag, 2008.
Refereed Abstracts/Communications under Reviewers and with Proceedings
P. Consoli, A. Collerà and M. Pavone, “Which Artificial Colony Seems to Be Most Suitable for
Coloring a Map?”, 11th Workshop on Advances in Continuous Optimization (EUROPT 2013),
Florence, Italy, 26-28 June, 2013.
P. Consoli, and M. Pavone, “Artificial Bee Colony for Graph Coloring Problem”, 26th European
Conference on Operational Research (EURO | INFORMS MMXIII), Rome, Italy, 1-4 July, 2013.
A. G. De Michele and M. Pavone, “Multi-Threaded Genetic Algorithm for Escaping Local
Optima”, 10th Workshop on Advances in Continuous Optimization (EUROPT), Siauliai, Lithuania,
July 5-7, 2012
M. Pavone, “Parameters Optimization in S-System Models using Population-based Reverse
Engineering Methods”, SIAM Conference on OPTIMIZATION (OP11), Darmstadt, Germany, May
16-19, 2011.
M. Pavone and N. Krasnogor, “A Memetic Clonal Selection Algorithm for a Combinatorial
Optimziation”, 8th EUROPT Workshop “Advances in Continuous Optimization”, satellite events
of European Conference on Operational Research (EURO XXIV), Lisbon, Portugal, July 11-14,
2010.
M. Pavone and N. Krasnogor, “Bio-Inspired Reverse Engineering Methodologies to Infer the Gene
Regulatory Networks”, 24th European Conference on Operational Research (EURO XXIV), special
session on Natural Computation in BioInformatics, Lisbon, Portugal, July 11-14, 2010.
V. Cutello, G. Nicosia and M. Pavone, “Optimization Algorithms for the Protein Structure
Prediction Problem”, 24th European Conference on Operational Research (EURO XXIV), special
session on Natural Computation in BioInformatics, Lisbon, Portugal, July 11-14, 2010.
Refereed Abstracts/Communications under Reviewers and without Proceedings
V. Cutello, G. Nicosia, M. Pavone “Robust Immunological Algorithm for High-Dimensional Global
Opimization”, VI Italian Workshop on Artificial Life and Evolutionary Computation, Naples, Italy,
November 23-25, 2009.
V. Cutello, G. Nicosia, M. Pavone “A Hybrid Immunological Algorithm for Combinatorial
Optimization Problems”, VI Italian Workshop on Artificial Life and Evolutionary Computation,
Naples, Italy, November 23-25, 2009.
Italian Journals
G. Nicosia, M. Giacobini, M. Pavone, L. Vanneschi, “Workshop Italiano di Vita Artificiale e
Computazione Evolutiva (WIVACE 2007)”, Sistemi Intelligenti, Società editrice Il Mulino, a.XX,
n.2/Agosto 2008.
Best Regards
dr. Mario F. Pavone