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Title
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Technical
Expertise Cost
Required
Esri2EML and BDP2EML are very closely related programs for translating
metadata from ESRI or FGDC and from Biological Data Profile (BDP) to
Ecological Metadata Language (EML), version 2.0.1. Generally, these kinds of
programs are called "crosswalks".
The Esri2EML XSLT stylesheet will allow you to create an Ecological
Metadata Language(EML) document out of an FGCD XML file generated by
ESRI ArcGIS products. Note that there is a document explaining how to
converting ArcGIS v10.0 Metadata to EML, since ESRI changed their XML
metadata structure at Version 10 of ArcGIS.
Biological Data Profile <-> Ecological Metadata Language Crosswalk:
BDP is an extension of FGCD that addresses certain biological features, such as
Esri2EML
Basic
taxonomy. Stylesheets which translate XML both ways: EML->BDP and BDPand
programming Free
>EML. BDP is used by NBII.
BDP2EML
skills
The content standard for Digital Geospatial Metadata and Biological Data
Profile can be found here: http://www.fgdc.gov/standards/projects/FGDCstandards-projects/metadata/...
The Esri2EML stylesheet: http://intranet.lternet.edu/im/project/Esri2Eml/docs
The BDP<->EML stylesheets:
https://svn.lternet.edu/websvn/filedetails.php?repname=EML&path=%2Ftrunk...
Both sets of stylesheets are part of the EML code in the Ecoinformatics
repository:
https://code.ecoinformatics.org
eXist is an open source database management system built on XML (extensible
markup language) technology. eXist stores information (data or metadata)
encoded in XML. The database is queried using XQuery (XML query
language), and follows many other W3C XML standards, including XPath and
XSLT.
eXist
eXist includes a query editor and debugger. There is a large library of example
data, code and applications that can be adapted.
eXist typically runs as a Java web application under Tomcat, and also comes
with a desktop application which is useful for uploading documents in batchmode.
Advanced
Free
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Technical
Expertise Cost
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Metacat is a flexible, open source metadata catalog and data repository that
targets scientific data, particularly from ecology and environmental science.
Metacat accepts XML as a common syntax for representing the large number of
metadata content standards that are relevant to ecology and other sciences. Thus,
Metacat is a generic XML database that allows storage, query, and retrieval of
arbitrary XML documents without prior knowledge of the XML schema.
Metacat
Metacat is designed and implemented as a Java servlet application that utilizes a
relational database management system to store XML and associated meta-level Basic
information. Installation of Metacat recommends the use of Apache Tomcat for programming Free
servlet management and PostgreSQL as the underlying RDBMS, although other skills
configurations are possible. Metacat provides a rich client Application
Programming Interface (API) and supports a variety of languages, including
Java, Python, and Perl.
Metacat is being used extensively throughout the world to manage
environmental data. It is a key infrastructure component for the NCEAS data
catalog, the Knowledge Network for Biocomplexity (KNB) data catalog, and for
the DataONE system, among others.
Morpho
Morpho a program that can be used to enter metadata, which are then stored in a
file that conforms to the Ecological Metadata Language (EML) specification.
Information about people, sites, research methods, and data attributes are among
the metadata collected. Data can be stored with the metadata in the same file.
No
Free
Morpho allows the user to create a local catalog of data and metadata that can be programming
queried, edited and viewed. Morpho also interfaces with the Knowledge
Network for Biocomplexity (KNB) Metacat server, which allows scientists to
upload, download, store, query and view public metadata and data.
The Taiwan Forestry Research Institute has produced a set of web-accessible
tools that use Ecological Metadata Language (EML) documents to produce
TFRI EML maps and statistical products. They are available at:
Metadata http://metacat.tfri.gov.tw/tfri/.
Analysis
Tools
One tool creates an "R" statistical language program from an EML document
that can then be edited online . Another produces a Google Map displaying
locations from the metadata document. A final module ingests an EML
No
Free
programming
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document and the associated data and performs quality control checks and
simple analyses using a graphical user interface.
Technical
Expertise Cost
Required