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8/16/12 Ch 2: The Nature of Life: Physical & Chemical Bases of Life The Universe Energy Laws of thermodynamics The Universe Energy Laws of thermodynamics 1 8/16/12 The Universe Energy potential kinetic The Universe Energy Matter Periodic Table of the Elements Newer photos of the Elements http:// www.periodictable.com/ http://webelements.com/ 2 8/16/12 Periodic Table of the Elements Group IA: Alkali Metals Group IIA: Alkaline Earth Metals Periodic Table of the Elements 3 8/16/12 Transition Metals Group VB Group IIIB Group IVB Group VIIB Group VIB Transition Metals Group VIIIB Transition Metals Group IB Group IIB 4 8/16/12 Periodic Table of the Elements Group IIIA: Boron Family Group IVA: Carbon Family Periodic Table of the Elements 5 8/16/12 Group VA: Nitrogen Family Group VIA: Oxygen Family Periodic Table of the Elements Group VIIA: Halogens 6 8/16/12 Periodic Table of the Elements Group VIIIA: Noble Gases What s inside an atom? Sub-atomic Particles Carbon atom ~1 AMU ~1 AMU Much smaller 7 8/16/12 Periodic Table of the Elements Periodic Table of the Elements 8 8/16/12 Periodic Table of the Elements Hydrogen Isotopes Hydrogen Deuterium Tritium 9 8/16/12 Ionic bond Single bond Covalent Bonds Triple bond Methane CH4 10 8/16/12 11 8/16/12 12 8/16/12 Molecules of Life A.Water B. Organic Polymers C. Other II. Organic Polymers A. Organic B. types of C-containing molecules 1. Hydrocarbons 2. others functional groups C. mers Some functional groups 13 8/16/12 Biomolecules can be transformed by 5 kinds of reactions: 1. functional-group transfer 2. rearrangement ATP Biomolecules can be transformed by 5 kinds of reactions: 3. electron transfer (oxidation & reduction) OILRIG “LEO-GER” Biomolecules can be transformed by 5 kinds of reactions: 4. condensation/ dehydration synthesis 5. cleavage/hydrolysis 14 8/16/12 Carbohydrates monosaccharides Dehydration synthesis Disaccharides Another example: glucose + glucose -> maltose disaccharide Polysaccharides made of glucose (not all are) Lipids: Triglycerides saturated unsaturated Dehydration synthesis 15 8/16/12 2 fatty acids glycerol What phospholipids form in water Steroids Ergosterol Animals only (fungal) 16 8/16/12 Proteins & polypeptides Monomers: amino acids carboxy acid Can be R 20 different things amino group Building a polypeptide hydrolysis dehydration synthesis Peptide bond Primary structure = the order of amino acids in a polypeptide chain alpha helix 17 8/16/12 Secondary structure = the shape of specific regions in a polypeptide chain alpha helix beta Tertiary structure = beta sheet the shape of 1 entire polypeptide chain alpha helix - Some proteins are 1 polypeptide random loop alpha helix alpha helix Quaternary structure = the configuration of two or more polypeptides (subunits) to make a protein 18 8/16/12 Quaternary structure (this one has 4 subunits) Nucleic acids Monomer: nucleotide Variations on a nucleotide 19 8/16/12 Nucleic Acids (polymers) DNA RNA 20