Download Syed Habib Bokhari

Syed Habib Bokhari
(Common-Wealth Scholar & Fellow)
Office: 0512501223
Residence: 0512292155
Mobile: 0300-5127684
FAX: 0514442805
Email: [email protected]
[email protected]
DOB : 01-3-1973
EDUCATION
Jan, 1999-Sep, 2002
Jan, 1995-July, 1997
Univ. of Glasgow
Q.A.U, Pakistan
Microbiology & Immunology Ph.D.
Biotechnology, M. Phil.
RESEARCH SPECIALIZATION
Infectious Diseases, Glycoengineering, Biosensors, Bioinformatics
PROFESSIONAL EXPERIENCE
June 2012 to 2015
Professor & Chairman
Department of Biosciences
CIIT, Islamabad
2011 to 2013
Head & Chairman,
Department of Biosciences
CIIT, Islamabad
2010 to 2013
Associate Professor
Department of Biosciences
CIIT, Islamabad
2008-2008
Head,
Department of Biosciences
CIIT, Islamabad
2003-2010
Assistant Professor,
Department of Biosciences
CIIT, Islamabad
2007-present:
Affiliate faculty
Bioinformatics and Computational Biology
College of Science
George Mason University, Manassas, Virginia
2013-2013
Short-term Common-Wealth Fellowship (3 Months)
Department of Microbial Pathogenesis/Welcome Trust, Sanger Center
London School of Hygiene and Tropical Medicine/Cambridge
2009-2010
Post Doc
Department of Microbial Pathogenesis
London School of Hygiene and Tropical Medicine
2005-2006:
Visiting Scientist
Department of Environmental Sciences and Policy
George Mason University, Fairfax, Virginia 22030
2001- 2002:
Demonstrator (Microbiology and Molecular Biology)
Institute of Biomedical and Life Sciences
Univ. of Glasgow, Glasgow
Sep, 1996- Jan, 2003: Lecturer
Post Graduate Botany Department
Govt. S. E. College, Bahawalpur
Feb 1995-August, 1996: Junior Research Assistant (M. Phil)
Quaid-i-Azam University, Islamabad/National Institute of
Biotechnology & Genetic Engineering, Faisalabad
TOTAL INDIVIDUAL RESEARCH FUNDINGS AS PI: >20.00 M. Rs.
TOTAL DEPARTMENTAL FUNDINGS (PC-1) (for establishing and strengthening Department as
Pioneer faculty):
>60.00 M.Rs.
Total Post PhD Research & Teaching Experience:
Total Pre PhD Research & Teaching Experience:
13 years (2002 to date)
7 years & 6 months (Feb 1995-August 2002)
Total Research & Teaching Experience at Post graduate level:
20 years
Awards & Honors:
1. Recipient of Commonwealth scholarship for Ph.D. (1999-2002)
2. Recipient of Commonwealth Fellowship. (2013)
3. Awarded Roll of Honor for standing first in B.Sc. in Botany, Zoology, Chemistry group
4. Short-listed for Fulbright scholarship (1998-9: Did not pursue),
5. France scholarship for Ph.D. (1998-99: Did not pursue)
6. Selected for cultural scholarship for Ph.D. (1998-99: Did not pursue)
7. President Talent Scholarships at B.Sc. and M.Sc. Levels
8. Infaq Foundation Scholarship (HEC) at M. phil. Level
9. British Council: Strategic partnership extension: knowledge exchange Award 2012
10. British Council: Pak-UK linkage/INSPIRE Award, 2009-2012
11. Higher Education Commission NRPU grant 2008-2010
12. Higher Education Commission NRPU grant 2008-2011
13. Pakistan Science Foundation grant, 2008-2010
14. Higher Education Commission PORC grant, 2005
15. PCST Productive Scientist 2008, 2012
16. CIIT Productive Scientist 2008-2012
17. Best Poster Award given to my PhD student in 2009 in International meeting at Kherpur
University Sindh
18. Best poster prize at UNESCO’s World Science Day on 12, November 2014.
“Campylobacter jejuni Contamination in Poultry and its Risk of Association with
Type Six Secretion System (T6SS)”. Fariha Masood Siddiqui, Olivia Champion,
Richard Titball, Zobia Noreen, Habib Bokhari
19. Contributed significantly in formulating first National Bioinformatics Policy document in
2004-2005
20. Designed curriculum for Bioinformatics and Biosciences undergraduate degree program
(CIIT) and started this program at COMSATS in 2003
21. I am the first researcher from Pakistan who has been able to complete the whole genome
sequence of any pathogen (100 Vibrio cholera Genome Project) from Pakistan in
collaboration with LSHTM and Sanger centre, UK
22. NOMINATED FOR THE BEST TEACHER AWARD FROM CIIT IN 2011
23. NOMINATED FOR CIVIL AWARD FROM CIIT 2012
Memberships in academies and societies:
1. Member of Global Yersinia pestis Genomics group
2. Member General Council, University of Glasgow
3. Member Zoological Society of Pakistan
4. Member HEC curriculum committee for Bioinformatics
5. Expert Member of HEC Project Reviewer’s committee
6. Member Society for General Microbiology, UK
7. Member American Nanosociety
8. Member Board of studies Department of Microbiology, QAU, Islamabad
9. Member Board of studies Department of Biochemistry, QAU, Islamabad
10. Editor of "Journal of Integrative Computational Biosciences"
11. Editor of journal "Advances in Infectious Diseases"
12. Public Health Frontier (PHF)
Research Articles:
(Refereed Impact factor)
2015
1. Muhammad Rizwan Riaz, Abdul Rauf Siddiqi, Habib Bokhari. Structural and Functional Studies
of BapC Protein of Bordetella pertussis. 2015. (Accepted: Microbiological Research)
2. Fariha Siddiqui, S.A.M.A. S. Eqani, David J. Studholme , Olivia L. Champion, Brendan W.
Wren, Richard W. Titball Habib Bukhari, Molecular Detection Identified a Type Six Secretion
System in Campylobacter jejuni from Various Sources but not from Human Cases. 2015.
(Available online: Journal of Applied Microbiology)
3. Sundus Javed, Fahad Said, Habib Bokhari*. Bordetella parapertussis outbreak in Bisham,
Pakistan in 2009-2010: Fall out of the 9/11 1 syndrome. 2015. (Available online: Epidemiology
& Infection)
4. Fariha Masood Siddiqui, Muhammad Akram, Nighat Noureen, Zobia Noreen, Habib Bokhari.
Antibiotic Susceptibility profiling and virulence potential of Campylobacter jejuni isolates from
different sources in Pakistan. Asia Pacific Journal of Tropical Medicine. 2015. ACCEPTED
5. Tariq A, Hameed A, Bukhari H, Masood F, 2015. Is atomic rearrangement of type IV PHA
synthases responsible for increased PHA production?. (Available online: Journal of
Biomolecular Structure & Dynamics).
6. Muhammad Ali Syed, Bushra Jamil and Habib Bokhari1*. 2015. “Shattering a Myth: Whooping
Cough susceptible to antibiotics” (Accepted: Pakistan Journal of Pharmaceuticals).
7. Exploring Natural Products from the Biodiversity of Pakistan for Computational Drug Discovery
Studies: Collection, Optimization, Design and Development of A Chemical Database (ChemDP).
(Accepted: Current Computer-Aided Drug Design)
2014
8. Saba Asad, Ayesha siddiqa, Qurrat-ul-Ain, Habib Bokhari. 2014. Detection of Molecular
Markers by Comparative Sequence Analysis of Enzymes From Mycobacteria Species. Pakistan
Journal of Botany, 46(3): 1065-1070.
9. Jabir Hussain Syed & Ambreen Alamdar & Ashiq Mohammad & Karam Ahad & Zunera Shabir
& Haroon Ahmed & Syeda Maria Ali & Syed Gul Abbas Shah Sani & Habib Bokhari & Kevin D.
Gallagher & Iftikhar Ahmad & Syed Ali Musstjab Akber Shah Eqani. 2014. Pesticide residues in
fruits and vegetables from Pakistan: a review of the occurrence and associated human health
risks. Environment Sciences and Pollution Research. (Available online).
10. M Abdullah, A Muhammad, SA Malik, N Boston, H Bokhari, MN Shafaqat, A Alamdar, M
Fasola, SAMAS Eqani. 2014. Avian feathers as a non-destructive bio-monitoring tool of Toxic
Metals Signatures: A case study from severally contaminated areas of Pakistan. Available online
Chemoshpere.
11. James W. Harrison , Tran Thi Ngoc Dung , Fariha Siddiqui , Sunee Korbrisate , Habib Bukhari,
My Phan Vu Tra , Nguyen Van Minh Hoang , Juan Carrique-Mas, Juliet Bryant , James I.
Campbell , David J. Studholme , Brendan W. Wren, Stephen Baker, Richard W. Titball, Olivia L.
Champion . 2014.Identification of Possible Virulence Marker from Campylobacter jejuni Isolates.
(Emerging Infectious Diseases; 20(6):1026-9.
12. M. Idreesa, K. Thangavelud, M. Sikaroodic, C. Smithb,c, J. Sivaramand, P. M. Gillevetc, H.
Bokharia*. 2014. Novel fluorescent protein from Hydnophora rigida possesses green emission.
Biochemical and Biophysical Research Communications, 448(1); 33-38
13. Saira Mumtaz, Rashad Hussain, Abdul Rauf*, H. Bokhari, M. Qaiser Fatmi, Michael
Oelgemöller and A. M. Qureshi* 2014. Synthesis, Molecular docking studies, and in vitro
screening of barbiturates/thiobarbiturates as antibacterial and cholinesterase inhibitors.
Medicinal Chemistry Research 23: 2715-2726.
14. Syed M Shah, Ankur Mutreja, Nick Thomson, Stephen Baker, Julian Parkhill, Gordon Dougan,
Habib Bokhari\*and Brendan W. Wren\*. 2014 “Genomic Epidemiology of Vibrio cholerae O1
associated with Floods, Pakistan, 2010. Emerging Infectious Diseases 20 (1): 13-20.
15. Mudassar Khan, Syed Ali Musstjab Akber Shah Eqani, Athanasios Katsoyiannis, Salman Akbar
Malik, Alamdar Hussain, Azhar Rashid, Karam Ahad, Mauro Fasola, Habib Bokhari, Ashiq
Mohammad. 2014. Cattle egret as a Biosentinels of Persistent Organic Pollutants (POPs)
exposures from different areas of Pakistan. DOI: 10.1007/s10653-013-9556-; Environ. Geochem
& Health, 36(3): 375-84.
2013
16. Muhammad Idrees, Syed Ali-Musstjab-Akber-Shah Eqania and Habib Bokhari. 2013. Sol-Gel
immobilization of methyl parathion degrading bacteria isolated from agricultural areas of
Pakistan. 29: (8): 733-744: Chemistry & Ecology) .
17. Syed Ali-Musstjab-Akber-Shah Eqania, Riffat Naseem Malik, Alessandra Cincinellic, Gan Zhang,
Xiangdong Lie, Ashiq Mohammadf, Abdul Qadirg, Azhar Rashidh, Habib Bokhari, Kevin C.
Jonesi, Athanasios Katsoyiannisj. 2013. Uptake of organochlorine pesticides (OCPs) and
polychlorinated biphenyls (PCBs) by River water fish. The case of River Chenab. STOTEN)450451: 83-91
18. Bokhari H1, Shah MA1, Asad S1, Sania A1, Akram M1 and Wren BW2.2013. Escherichia coli
pathotypes in Pakistan from consecutive floods in 2010 and 2011. Am J Trop Med Hyg
88(3):519-525
19. Muhammad Imran Khan, Muhammad Ajmal, Shazia Micheal, Maleeha Azam, Alamdar Hussain,
Amjad Shehzad, Hanka Venselaar, Habib Bokhari, Ilse J.de Wijs, Lies H.Hoefsloot, Mukhtar
Gill, Nadia Khalida Waheed, Rob W.J. Collin, Anneke I.den Hollander, Raheel Qamar, Frans P.
M. Cremers. 2013.. Homozygosity mapping identifies genetic defects in four consanguineous
families with retinal dystrophy from Pakistan. 84(3):290-3; Clinical Genetics.
2012
20. Syed M. A. Waqas A, Aisha N and Bokhari H. 2012. Seroprevalence of Bordetella pertussis
antibodies to Pertussis toxin among healthy children from two cities of Pakistan. J. col. Phy.
Surg. 22 (10): 677-678
21. A. Mughal, Y. F. Kazi, H. A. Bukhari, M. Ali. 2012 Pertussis resurgence among vaccinated
children in Khairpur, Sindh, Pakistan. Public Health 126 (6):518-22
22. Muhammad Ajmal, Muhammad Imran Khan, Shazia Micheal, Waqas Ahmed, Ashfa Shah, Hanka
Venselaar, Habib Bokhari, Aisha Azam, Nadia Khalida Waheed, Rob W.J. Collin, Anneke I. den
Hollander, Raheel Qamar, Frans P. M. Cremers. 2012 Identification of recurrent and novel
mutations in TULP1 in Pakistani families with early onset retinitis pigmentosa. Molecular Vision
18:1226-1237.
23. Bokhari Habib, Bilal Iram, Sadia Zafar.. 2012. BapC autotransporter protein of Bordetella
pertussis is an adhesion factor. Journal of basic Microbiology, 52(4), 390-396
2011
24. Ashfaq Mahmood1, Muhammad Ismail, Muhammad Athar, Rashid Khushal, Mehmood Qadir2,
Riaz Ahmed, Muhammad Idrees1, Muhammad Rauf, Habib Bokhari1*. 2011. Antimicrobial
efficacy of metal-barbiturate conjugates against pathogenic strains of Escherichia coli and
Staphylococcus aureus. Letters in Drug Design & Discovery; 8 (10), 980-987.
25. H. Bokhari,1 F. Said1, M.A. Syed1, A. Hussain,2 Y. F. Kazi, 2 Teemu Kallonenc, Qiushui Hec,
Audrey J. Kingd K. Heuvelman3 and F. R. Mooi3 . 2011. Molecular typing of Bordetella
parapertussis isolates circulating in Pakistan. FEMS Immunology & Medical Microbiology, 63:
373-380
26. H. Bokhari,F. Said, M.A. Syed, A. Hussain, Y. F. Kazi, K. Heuvelman and F. R. Mooi. 2011.
Whooping cough in Pakistan: Bordetella pertussis vs Bordetella parapertussis in 2005-2009.
Scandinavian journal of infectious diseases, 43: 818-820.
27. Mojtaba Noofeli, Habib Bokhari, Paul Blackburn, Mark Roberts, John Coote & Roger Parton.
2011. BapC autotransporter protein is a virulence determinant of Bordetella pertussis.
Microbial Pathogenesis: 51(3):169-77.
28. Idrees, M., Mussarat, U., Badshah, Y., Qadir, M and Bokhari, H*. 2011. Prevalence of
antimicrobial resistance and integrons in uropathogenic Escherichia coli, from Punjab, Pakistan
: Brazilian Journal of Microbiology 42: 462-466.
29. Maleeha Azam, Rob W.J.Collin,Ayesha Malik, Muhammad I. Khan, Syed Tahir A. Shah1 Aftab A.
Shah, Alamdar Hussain, Ahmed Sadeque, Kentar Arimadyo Muhammad Ajmal, Ayesha Azam
Nadeem Qureshi, Habib Bokhari, Tim M. Strom, Frans P. M. Cremers, Raheel Qamar, Anneke I.
den Hollander. 2011. Identification of novel mutations in Pakistani families with autosomal
recessive retinitis pigmentosa. Archives of Ophthalmology, 129(10):1377-8.
30. Syed M. A and Bukhari S. H. A*. 2011. Gold nanoparticle based microbial detection and
identification. J. Biomed. Nanotechnol. Vol. 7, 1–9.
31. Muhammad Idrees, Muhammad Ali Shah, Raheel Qamar and Habib Bokhari*. 2011.
Antimicrobial Resistant Escherichia coli Strains Isolated from Food Animals in Pakistan.
Pakistan Journal of Zoology. 43(2), 303-310.
2010 & Earlier
32. H. Bokhari*, C. Smith, K. Veerendra, J. Sivaraman, M. Sikaroodi, P. Gillevet. 2010. Novel
Fluorescent Proteins From Hydnophora Rigida Possess Cyano emission. Biochemical and
Biophysical Research Communications 396(3):631-636.
33. Muhammad Ali Syed, Umair Manzoor, Ismat Shah and Habib Ali Bukhari*. 2010. .Antibacterial
effects of Tungsten nanoparticles on the Escherichia coli strains isolated from catheterized
urinary tract infection (UTI) cases and Staphylococcus aureus. New Microbiologica., 33(4):32935.
34. Idrees, M., Mussarat, U., M., Badshah, Y., Qamar, R. and Bokhari, H*. 2010. Virulence factors
profile of drug resistant Escherichia coli isolated from urinary tract infections, in Punjab,
Pakistan (European Journal of Clinical Microbiology & Infectious Diseases, 29(12):1533-7.
35. Muhammad Ali Syed, Syed Habib Ali Bukhari*. 2010. Adult and adolescent pertussis should not
be underestimated!. Pak J Med Sci. Vol. 26 No. 1, 44-45.
36. Muhammad Ajmal,
Waqas Ahmed,
Ahmed Sadeque,
Syeda Hafiza Benish Ali,
Syed Habib Bokhari, Nuzhat Ahmed and Raheel Qamar. 2010. Identification of a recurrent
insertion mutation in the LDLR gene in a Pakistani family with autosomal dominant
hypercholesterolemia. Molecular Biology Reports. 37(8); 3869-3875.
37. Muhammad Ali Syed, Shaista Babar, A. S. Bhatti, & Habib A. Bokhari*. 2009. Antibacterial
effects of silver nanoparticles on the bacterial strains isolated from catheterized urinary tract
infection cases. Journal of Biomedical Nanotechnology., 5: 209-214.
38. Atefeh Taherian Fard, Amna Salman, Bahram Kazemi and Habib Bokhari*. 2009. In silico
comparative genome analysis of malaria parasite Plasmodium falciparum and Plasmodium vivax
chromosome 4. Parasitology Research., 104 (6): 1361-1364.
39. Maleeha Azam, Muhammad Imran Khan, Alamdar Hussain, Syed Tahir Abbas Shah, Muhammad
Shakil Khan, Ahmed Sadeque, Habib Bokhari, Rob W.J. Collin, Maria M. van Genderen, A.I. den
Hollander, Frans P. M. Cremers, Raheel Qamar. 2009. A homozygous p.Glu150Lys mutation in
the opsin gene of two Pakistani families with autosomal recessive retinitis pigmentosa: Molecular
Vision, 3;15:2526-34.
40. S. HABIB BOKHARI* & P. BLACKBURN. 2008. Purification and protective efficacy of renatured C-terminal domain (P.30) of pertactin autotransporter protein of B. pertussis. Pak. J.
Bot., 40(2):825-832.
41. S. HABIB BOKHARI* & P. BLACKBURN. 2008. Pertactin processing and secretion in
protease(s) deficient strains of Escherichia coli suggestive of the possible role of proteases in
folding of autotransporter proteins. Pak. J. Bot., 40(2):815-824.
42. Shahid Mahmood Baig, Ayesha Azhar, Hammad Hassan, Jamshaid Mahmood Baig, Ayesha
Kiyani, Uzma Hameed, Fazli Rabbi, Habib Bokhari, Muhammad Aslam, Mohammad Amin Ud
Din, Shehla Anjum Baig, Khalid Hassan, Javed Anwar Qureshi and Tariq Zaman. 2006.
Spectrum of beta-thalassemia mutations in various regions of Punjab and Islamabad, Pakistan:
establishment of prenatal diagnosis. Haematologica/The hematology journal. 91(1), 3-5.
Recently Assigned Impact Factor: RESEARCH GATE
1. H. Bokhari, H. Bilal, M. Anwer & Patrick Gillevet. 2011. Evidences of lateral gene transfer
between Archaea and pathogenic bacterial genomes (Bioinformation, 6(8): 293-296); ( IF= 0.5)
2. Asif Raza, Hira Shareef, Hira Salim, Rashid Khushal, Habib Bokhari& 2011. Selection of
predicted siRNA as potential antiviral therapeutic agent against influenza virus ( Bioinformation,
6(9): 340-343; ( IF= 0.5)
3. Sadia Zafar, Arshan Nasir, Habib Bokhari. 2011. Computational analysis reveals abundance of
potential glycoproteins in Archaea, Bacteria and Eukarya. Bioinformation, 6(9): 352-355; ( IF=
0.5)
4. Syed Tabish, Abbas Raza, Arshan Nasir, Sadia Zafar and Habib Bokhari. 2011. Analysis of
glycosylation patterns and glycosyltransferases in Bacteria and Archaea (Bioinformation, 6(5):
191-195; (IF= 0.5)
5. Amna Salman, Atefeh Taherian Fard Arshan Nasir & Habib Bokhari. 2010. Comparative
analysis of organophosphate degrading enzymes from diverse species. Bioinformation 5(2): 6772 ( IF= 0.5)
6. Syed A.M.A.S. Eqani, Nadeem Ali, R.N. Malik, A. Katsoyiannis, G. Zhang, Habib Bokhari, Nida
Hanif , Mohammad Sohail, Ambreen Alamdar, Maria Ali, A. Mohammad. Organochlorine
residue in the riverine ecosystem of Pakistan: distribution and risk assessment. Dioxin 2014.
Organohalogen Compounds 76, 1082-1084.
(Non-Impact Factor/ISI indexed)
Nazish Bostan1, Nabgh-e-Amen and Habib Bokhari. Current and Future Prospects of Torque
Teno Virus. , J Vaccines 2013, S:1
1. M. A. Syed1*, A. S. Bhatti2, R. Guduru3, C. Z. Li3 and S. H. A. Bokhari. 2011. Use of SPR
biosensor for the study of proteolytic action of a serine protease enzyme. American Journal of
Biomedical Sciences, 3(4): 253-257
2. Amjad Ali Mughal, Yasmeen Faiz Kazi, Syed Habib Bukhari. 2011. Diagnosis of pertussis in
vaccinated children of Khairpur, Sindh, Pakistan by Cough Plate Method. Journal of
Microbiology and Infectious Diseases, 1(2): 68-72
3. Taimoor Hashmi1, Shakil Khan1, Valeed1, Habib Bokhari*1 2010. In silico identification of
vaccine candidates against enteric pathogens by comparative genome sequence. (Asian Pacific
Journal of Molecular Biology and Biotechnology, 18(3): 327-331/0. ( IF= ~0.05)
4. Hasan Bilal Mirza, Maryam Anwar & Habib Bokhari. 2010. In silico identification of potential
horizontal gene transfer events between Archaea and pathogenic Bacteria. Journal of
Bioinformatics and Sequence Analysis (JBSA). 2(3), 36-41/1.
5. Muhammad Ali Syed, Fahad Said, S. Habib Ali Bukhari*. 2009. Seroepidemiology of Bordetella
pertussis
infections
in
the
twin
cities
of
Pakistan.
North Am J Med Sci. 1: 353-355/2.
6. Siddiqa, A., Niazi, M., Mustafa, F., Bokhari, H., Hussain, A., Akram, N., Shaheen, S., Ahmed, F.
and Iqbal, S. 2009. A new hybrid agent-based modeling & simulation decision support system
for breast cancer data analysis. In: Proc Information and Communication Technologies, pp. 134139. ICICT '09 International Conference on Aug. 15-16. (ISI-Indexed, Non-IF)/4.
7. S. M. Baig, F. Rabbi, U. Hameed, J. A. Qureshi, Z. Mahmood, S.H. Bokhari, A. Kiani, H,
Hassan, J.M. Baig, A. Azhar, T. Zaman. 2005. Molecular characterization of mutations causing
β-thalassemia in Faisalabad Pakistan using the amplification refractory mutation system (ARMSPCR). Ind. J. Hum. Gen. 11(2), 80-83 (Pubmed Indexed)/3.
8. Bokhari H. Characterisation and secretion mechanism of Bordetella pertussis autotransporter
proteins. University of Glasgow. Ph.D. thesis, 2002.
Manuscripts Submitted & in Preparation:
1 Umair Manzoor, Sumera Siddique, Rafay Ahmed, Habib Ali Bokhari, Iftikhar Ahmad,
Muhammad Tahir Amin and Abdulrehman Ali Alazba "STRUCTURAL, OPTICAL AND
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ANTIBACTERIAL CHARACTERIZATIONS OF MECHANO-CHEMICALLY PREPARED ZNO
NANOPARTICLES" (Submitted: Journal of Nanomaterials IF: 1.57)
Anabia Sohail, Rohena Naaz, Iqra Ahmad, Almas, Habib Bokhari. Epidemiology of Cholerae:
Review (Submitted: Epidemiology & Infection IF: 2.84).
Muhammad Sulaman Nawaz1, Ramla Shahid1, Sidra Rehman1, Saima Nawaz1, Arwa Fiaz1,
Zunaira Asif1, Momina Tariq1, Anum Masroor1, Umair Seemab2, Sajid Rashid3, Habib Bokhari*1 .
"QAUTRON: A tool for prediction and comparative analysis of transcription regulation
machinery also reveals annotation of 38 Vibrio cholerae O1 El Tor isolates of 2010 flood hits".
Submitted PLOS ONE (IF= 3.73)
Noor sehar, Qaiser Fatmi , Khadeeja Siddique, Habib Bokhari. Association of Paraoxonase 1
Polymorphisms with Human Diseases and its Interaction with Different Substrates Submitted:
Pakistan journal of Pharmaceuticals (IF= 4.3).
Ayesha Khan & Habib Bokhari*. Phylotyping and Clonal group A Screening of Escherichia coli
Isolates from Pakistan. (Submitted: Journal of Medical Microbiology IF: 2.5)
Fatima Raza1, Ramla Shahid2, Saba Zahid2 and Habib Bokhari1. Biosynthesis of Cadmium
nanoparticles by Staphlyococcus aureus. (Submitted: J. Biomed. Nanotechnol. IF=5.25)
Ehsan S, Akram M, Fatima Kaleem, Bokhari H*. Tuberculosis in Pakistan: Mycobacterium
tuberculosis complex vs. Non-tuberculous Mycobacterium. (Submitted: Asia Pacific Journal. IF:
1.)
SAMAS Eqani, K Ahad, Z Shabir, H Bokhari, A Rasheed, I Ahmad, A Mohammad. Pesticides
contamination in the Selected Exportable Food Commodities of Pakistan: A review on the
Consumer’s Health Risk and Recommendations for Future Study. Food Additives and Toxicology.
2013, Forthcoming: (Submitted).
Sadaf Afzal, Shams ul Islam, Bilal Ghori, M. Saleet Jafri, Habib Bokhari*. Mathematical model
for disinfection of drinking water from Diarrheagenic Escherichia coli (In Preparation)
Muhammad Idrees, Muhammad Akram, Muhammad Ajmal, Alamdar Hussain, Raheel Qamar
and Habib Bokhari. Decreased Paraoxonase Activity in Familial Hypercholesterolaemia (In
Preparation)
Habib Bokhari, Rebecca Langdon, Dennis Linton and Brendan Wren. Oligosacchryl transferase
PglB of Campylobacter jejuni is a glycoprotein. (In preparation)
Ahmed F, Iqbal S, Shaheen S, Siddiqa A, Akram N, Shan M.K.N, Niazi M, Mustafa F and
Bokhari H. Epidemiological Study of Breast Cancer in Pakistan (In preparation)
Sadia Zafar, Syed Tarique Moin, Zaheer Ul-Haq & Habib Bokhari. In silico template-based
structural modeling and molecular dynamics simulation of two bacterial Oligosaccharyl
Transferases (In Preparation)
Bibi.Z , Hayat.R and Bokhari. H. EpiCIIT’- a customized tool for visualization and analysis of
Epidemiological data methods (In preparation).
Habib Bokhari & Qaiser Fatmi. Bioinformatics in Pakistan: Literacy, Capacity Building &
Action Plan & achievements (Submitted : JCB IF: 1.55)
Habib Bokhari , Mojtaba Noofeli, Blackburn P. Cloning, expression and purification of Bap-C
antigen of Bordetella pertussis in E. coli and its characterization (In preparation)
Muhammad Idrees, Muhammad Akram, and Habib Bokhari. Paraoxonase-1 gene
polymorphisms among the pesticide exposed population of Pakistan (In preparation).
Muhammad Idrees, Muhammad Akram Raheel Qamar and Habib Bokhari. Paraoxonase-1gene
polymorphisms & retinitis pigmentosa in Pakistani families (In preparation).
Muhammad Idrees, Muhammad Akram, Shazia Michael, M. Imran, Raheel Qamar, Asifa Ahmed
and Habib Bokhari. Paraoxonase-1 gene polymorphisms & open angle glaucoma in Pakistani
(In preparation).
Muhammad Idrees, zobia Noreen, Habib Bokhari. Characterization of methyl parathion
degrading bacteria isolated from agricultural areas of Pakistan (In preparation).
21 MA Shah, zobia Noreen, Habib Bokhari. Characterization of heavy metal resistance bacteria
isolated from agricultural and industrial areas of Pakistan (In preparation)
22 Sarah Zaidi, Syed Ali Musstjab Akber Shah Eqani, Qurban Ali, Habib Bokhari. Toxic Metals
Residues in Poultry Chicken Collected From Rawalpindi, Pakistan. (In Preparation).
23 Anabia Sohail, Rohena Naaz, Sulaman Nawaz, Habib Bokhari. In silico Identification and
Comparative Analysis of Antibiotic Resistant Genes in Pakistani Multi-Antibiotic Resistance
Vibrio cholerae O1 El Tor Isolates (In Preparation).
24 Uzma Khalil, Fariha Siddiqui, Mehwish Younus, Brendan W. Wren, Habib Bokhari.
Characterization of multiantibiotic resistant Enteroaggregative Escherichia coli isolates from
Pakistan (In Preparation).
25 Mehwish Younus, Uzma Khalil, Brendan W. Wren, Habib Bokhari. Detection of mutations in
gyrA and parC genes in multiple drug resistant Enteropathogenic Escherichia coli isolates in
Pakistan (In Preparation).
26 Iqra Ahmad, Almas, Sulaman Nawaz, Habib Bokhari. Comparative Genomics & Evolutionary
Trends in Clinical Isolates of Vibrio cholerae O1 El Tor from 2010 Floods of Pakistan (In
Preparation).
Papers & Posters Presented and Published at Refereed International Conferences:
a. Isolation, Identification And Drug Susceptibility Profile Of Candida Sp. From
Gastroduodenal Pathology Patients In Islamabad-Pakistan S. Sherwani1, M. Muhammad
Umar2, F. Rasheed3, S. Bokhari4, S. U. Kazmi5; 1Federal Urdu Univ. of Arts, Sci. and
Technology-Karachi Pakistan, Karachi, PAKISTAN, 2Holy Family Hosp., Rawalpindi
Med. Coll.-Rawalpindi-Pakistan, Karachi, PAKISTAN, 3Breath MAT Lab-NORI Hosp.Islamabad-Pakistan, Karachi, PAKISTAN, 4Dept. of BioSci.-COMSATS Inst. of
Information Technology-Islamabad-Pakistan, Karachi, PAKISTAN, 5Immunology and
Infectious Disease Res. Lab. (IIDRL)-Dept. of Microbiol.-Univ. of Karachi-Pakistan,
Karachi, PAKISTAN. 16-19th June, ASM 2012, San Francisco, California. A-014
b. Siddique F, Shah MA, Akram M, Wren BW, Bokhari H. 2012. Analysis of Campylobacter
jejuni from diverse sources in Pakistan. Department of Biosciences, CIIT, Islamabad,
Pakistan; Department of Pathogen., Molecular Biology, LSHTM, UK. CampyUK 2012,
London School of Hygiene & Tropical Medicine
c. Habib & Bokhari; Raheel Qamar, Muhammad Idrees, Yasmin Badshah & Uzma
Mussarat. 2007. The prevalence of integrons among Escherichia coli isolated from
different sources in Pakistan and associated drug resistance patterns. II International
onference on Environmental, Industrial and Applied Microbiology; November–1
December, Seville, Spain
d. Habib & Bokhari; Umair Manzoor, Muhammad Ali, Asad Razzaq & Ismat Shah. 2007.
Antibacterial effect of Tungsten nanoparticles on the E. coli strains isolated from
catheterized urinary tract infection (UTI) cases and Staphylococcus aureus. II
International Conference on Environmental, Industrial and Applied Microbiology.
November–1 December, Seville, Spain
e. Bokhari, S. H., Blackburn, P., Coote, J., Roberts, M. and Parton, R. 2006. BapC, a
newly identified member of the Bordetella Pertussis autotransporter family & its
pathogenic potential. Proceedings of Fifth International Biennial Conference of
Pakistan Society for Microbiology, “Molecular Mechanism of Host-Pathogen
Interactions”. Karachi, Pakistan
f.
Baig, S. M., Zaman, T., Hameed, A., Rabbi, F., Bukhari, S.H. et al. 2004. Molecular
characterization of mutations causing β-thalassemia in Pakistan using amplification
refractory mutation system (ARMS) and allele specific oligonucleotide (ASO)
hybridization. HGVS Scientific and Annual General Meeting. Toronto, Canada.
g. Bokhari, S. H., Blackburn, P., Coote, J., Roberts, M. and Parton, R. 2003. The role of
Bordetella pertussis Bap-5 protein in serum resistance and colonization in vitro and in
vivo. First international and national symposium on Biotechnology. Jamshoro, Pakistan.
h. Bokhari, S. H., Blackburn, P., Coote, J., Roberts, M. and Parton, R. 2002. Bap-5, a
newly identified member of the Bordetella Pertussis autotransporter family. Poster 11.
American Society for Microbiology, Seventh International Symposium on Pertussis.
Hinxton, United Kingdom.
Press, Papers & Posters Presented and Published at National Conferences:
Habib Bokhari, Paul Blackburn, Mark Roberts, John G. Coote and Roger Parton
Cloning, expression and purification of Bap-C antigen of Bordetella pertussis in E. coli and in
vitro bactericidal activity. 2010. 10th Biennial Conference of Pakistan Society for Biochemistry
and Molecular Biology,
Faheema Kalsoom, Saniya Hafeez, Saadia Muazzum, Muaz Niazi, Farah Mustafa and Habib
Bokhari. Retrospective Analysis of Colorectal Cancer Incidence in the Islamabad/Rawalpindi
Region between Years 2000-2008 and Bioinformatic Tool Development to Assess Risk Factors
10th Biennial Conference of Pakistan Society for Biochemistry and Molecular Biology, 2010
H. Bokhari*, C. Smith, K. Veerendra, J. Sivaraman, M. Sikaroodi, P. Gillevet NOVEL
FLUORESCENT PROTEINS FROM HYDNOPHORA RIGIDA POSSESS CYANO AND GREEN
EMISSIONS 10th Biennial Conference of Pakistan Society for Biochemistry and Molecular
Biology, 2010
Antibacterial effects of silver nanoparticles on the bacterial strains isolated from catheterized
urinary tract infection cases 2009. At First National Conference of Microbiology organized by
Shah Abdul Latif University, Khairpur. (21/22.11.09:.First prize for the poster)
Muhammad Ali Syed, Umair Manzoor, Ismat Shah and Habib Ali Bokhari. 2009. Development of
SPR based immunosensor for the detection of Staphylococcus aureus’ First Conference of
Microbiology at Shah Abdul Latif University Khairpur, Sindh.
Muhammad Ali Syed, Umair Manzoor, Ismat Shah and Habib Ali Bokhari. 2008. Effect of Silver
and Tungston Nanoparticles on bacterial isilates from urinary tract infections and, International
thematic workshop on Nanomedicine: The use of nanoparticles in medical diagnostics’
Comstech-Islamabad.
Asif raza, Hira shareef, Hira salim and Habib Bokhari. 2007. Bioinformatics Approaches for
Devising Antiviral/Therapeutic Agent against Influenza. Ist Symposium of Microbiology and
Molecular Genetics on Genomics, Proteomics, Metabolomics: Recent trends in Biotechnology,
University of Punjab, Lahore
Hasan Bilal Mirza, Maryam Anwar and S. Habib Bokhari. 2007. In silico identification of
potential horizontal gene transfer events from archaea to pathogenic bacteria. Ist Symposium of
Microbiology and Molecular Genetics on Genomics, Proteomics, Metabolomics: Recent trends in
Biotechnology, University of Punjab, Lahore
Muhammad Ali Syed, Arshad Bhatti and Habib Ali Bokhari. 2007. Effects of silver
nanoparticles on the E. coli isolates from urinary tract infection cases. Ist Symposium of
Microbiology and Molecular Genetics on Genomics, Proteomics, Metabolomics: Recent trends
in Biotechnology, University of Punjab, Lahore
Muhammad Idrees, Raheel Qamar and Habib Bokhar. 2007. Molecular characterization
and
comparison of drug resistance patterns among E. coli isolates from human subjects with
UTI and food animals. Ist Symposium of Microbiology and Molecular Genetics on
Genomics, Proteomics, Metabolomcs: Recent trends in Biotechnology, University of Punjab,
Lahore
Yasmin Badshah, Safia Khatoon, Raheel Qamar and Habib Bokhari. 2007. Prevalence of
virulence factors among extraintestinal clinical isolates of Escherichia coli obtained from
clinically diagnosed urinary tract infection patients. Ist Symposium of Microbiology and
Molecular Genetics on Genomics, Proteomics, Metabolomics: Recent trends in Biotechnology,
University of Punjab, Lahore
Bioinformatics: Science of Future. In Press (NEWS, 2003). S. Habib Bokhari, CIIT,
Islamabad
Baig, S.M., Bukhari, S.H., Shah, W.A., Arshad, M., Shamsi, T.S. and Qureshi, J.A. 1997. Thalassemia mutations in Pakistan: A strategy for prenatal diagnosis. First
National
Symposium on Biotechnology for Sustainable Development. 24-27, November, Lahore,
Pakistan.
Baig, S.M., Bukhari, S.H., Shah, W.A., Arshad, M., Shamsi, T.S. and Qureshi, J.A. 1997.
Characterization of mutations causing -Thalassemia in Pakistan. 21st National conference of
Pakistan Association of Pathologists, 14-16, November, Faisalabad, Pakistan.
Baig, S. M., Bukhari, S.H., Shah, W. A., Khattak, K.F., Ahmad, M., Asghar, M.S. and Qureshi,
J.A. Detection of HCV by RT-PCR and genotyping by dot-blot hybridization
in
Pakistani
patients with chronic hepatitis C and hepatocellular
carcinoma. Third Shaukat Khanum
Memorial Cancer Symposium, 22-24, February, Lahore, Pakistan.
Baig, S.M., Bukhari, S.H., Shah, W.A., Khattak, K.F. and Qureshi, J.A. 1996. Determination of
the spectrum of -Thalassemia genes in Pakistan by use of amplification refractory mutation
system (ARMS) and radiolabelled allele specific oligonucleotide (ASO) hybridization. Inaugural
International Conference on Genetics, 26-28, November, Islamabad, Pakistan.
Baig, S.M., Bukhari, S.H., Shah, W.A. and Qureshi, J.A. 1996. Spectrum of -Thalassemia
mutations in Pakistan. Third National Symposium on Basic Health Care and Social
Development, 21-22, September, Karachi, Pakistan.
Resource Person/Invited Talks:
Resource Person at Workshop on “Bioinformatics for computer scientists” at COMSTECH
21st-26th May, 2007
Resource Person at Workshop on “National Workshop on Techniques in Molecular
Biology, Bio-informatics & Vaccine Production” at CASVAB at University of Baluchistan,
Quetta-28th-30th May, 2007
Resource Person at Workshop on “Use of Therapeutic agents and Diagnostic Kits” held at
Arid Agriculture University in 2005
Resource Person at 2nd International Symposium on “Biomedical Materials: Current
Research and Future Signposting 2010” held at COMSATS, Lahore.
Resource Person & chair of session on “Informatics & Basic Science” at Microbial Forensics
conference, Zagreb, Croatia, 14-16 October, 2013 (Organized by U.S. Academy of Sciences,
Royal Academy of Sciences & Croatian Academy of Sciences).
Invited Talk for International meeting on “Biosafety & Bioethics” at COMSATS, Islamabad,
2014
Invited Talk for International conference on “INNOVATIVE BIOLOGICAL & PUBLIC
HEALTH RESEARCH” at GCU, LAHORE, May 6, 2014
Resource Person“ Bioinformatics approaches to adaptations, genome evolution and
biological associations” Training Workshop, Department of Computer Sciences, Cambridge,
UK, 23-27 March, 2015 (Organized by MetaBLE-EU Funding and COST Action BM1102).
Resource Person @Pak-China Business Forum at Pak-China Friendship center, Islamabad,
Pakistan for three consecutive years i.e. 2013-2015.
Book in preparation:
Protein Modeling & Docking of Oligosaccharyl transferases of Campylobacteraceae.
Other Social & National Services:
Included in Approved supervisors list of HEC
Included in the panel of Examiners & Paper setter at Punjab University Lahore
Associated with Intel and Ministry of Education as an assessor of student’s innovative
projects in the field of Biosciences
Contributed in preparing the PC-1 for Infrastructure development for teaching and
research in Bioinformatics at CIIT, Islamabad
Contributed in formulating the National Bioinformatics Policy document
Helped through knowledge generation during 2010 FLOODS wrt the Clean Drinking Water and
Diarrhea and through relief effort
Workshops & Meetings:
Attended International workshop on genotyping the bacterium Yersinia pestis 19-22 June, 2012,
San Francisco, California, USA as an expert from Pakistan
Attended SGM, UK meeting on “Glycoengineering” at Herriot Watt University, Edinburgh,
September 2009.
Attended International Workshop on Bioethics, Islamabad, 2004.
Attended Workshop on Identification Maintenance & Preservation of Microorganism, Q.A.U,
Islamabad, 2004.
Attended International Workshop on Bioinformatics, Islamabad, 2003.
Attended Qiagen’s Workshop on Molecular Biology Research, Edinburgh, 2001.
Ongoing Research Projects (TOTOAL INDIVIDUAL FUNDS: >22 Million Rs.)
Campylobacter control in poultry through training for commercial poultry farm workers: As PI, In
collaboration with Prof. Brendan Wren, London School of Hygiene & Tropical Medicine (British
Council: “STRATEGIC PARTNERSHIP EXTENSION: KNOWLEDGE EXCHANGE”: Award 15,900
Pounds
Phylotyping and Clonal Group A (CgA) Screening of Escherichia coli Isolates From Pakistan &
development of method for the selective detection of causative agent of urinary tract infections PSF.
(APPROVED: 2 Million Rs.)
“Advanced bioinformatics for genome and metagenome analyses with discovery of novel biocatalysts
from extremophiles: implications for improving industrial bioprocesses” European Union H2020: (RISE
Project) In Collaboration with UNICAM, UNI-MILANO, ITALY, Univ. Cambridge and Sebanci, Turkey
Projects Completed
Joint COMSATS Institute of Information Technology-George Mason University Initiative
in
Bioinformatics” (Completed: POCR, HEC).
Cloning of Fluorescent protein from Coral, initial spectroscopic Analysis/ characterization and
development of whole cell Biosensors (CIIT Project: Completed)
Distribution pattern of antimicrobial resistance genes and virulence factors among isolates of E. coli
from clinically diagnosed urinary tract infection patients and molecular pathogenesis (CIIT Project:
Completed)
Epidemiological investigation of Pertussis infection in Pakistan by studying the distribution of ptx, prn &
fim alleles (Pakistan Science Foundation): As PI, In collaboration with Prof. Dr. Frits. R. Mooi, Lab for
Vaccine Preventable Diseases (LTR) RIVM, Bilthoven, Netherlands. (PSF funded- 1.0 M. Rs.)
“Development of an integrated whole-cell based biosensors to detect bioavailable organophosphates
from environment”: As PI. (HEC funded 3.9 Pak M. Rs.)
“Development of an integrated system comprising of engineered bacteria based Biosensors for the
detection of bioavailable toxic metals from environment”: As PI. (HEC Funded: 1.6 M. Rs.)
“Source Tracking and Surveillance System Of Diarrhea causing Bacterial Pathogens In Pakistan” As PI,
In collaboration with London School of Hygiene & Tropical Medicine, Keppel Street, London, WCIE
7HT (British Council: Pak-UK linkage: Award ~60,000 Pounds)
Other Research Interests
1. Epidemiological investigation and molecular pathogenesis of commonly occurring pathogens
such as Helicobacter pylori, Mycobacterium tuberculosis.
2. Study of the molecular mechanisms of drug resistance in community and hospital acquired
infections
3. Studying Host-Pathogen Interaction
4. Vaccine development
5. Microbial diversity & Metagenomics
6. Detection and classification of pathogens using Microfluidics, waveguide and SPR approaches
7. The structural studies of fluorescent molecules HriGFP, HriCFP & PglB (Using SPR & AFM)
8. Glycoengineering & Glycoproteins
Sequencing Projects:
The sequencing project of more than 100 V. cholera and first Campylobacter jejuni from Pakistan
completed in collaboration with Sanger Center, Oxford Univ. Exeter/LSHTM
International collaborations
1. Prof. Dr. Frits. R. Mooi, Lab for Vaccine Preventable Diseases (LTR) RIVM, Bilthoven,
Netherlands
2. Prof. Qiushui He, Pertussis Reference Laboratory, Department of Infectious Disease Surveillance
& Control, National Institute for Health and Welfare, Turku, Finland
3. Dr. Nick Thompson & Prof. Gordon Dougan, Sanger Centre
4. Prof. Lee Department of Biomedical Engineering Florida International University
5. Prof. Saleet Jafri, Head Computational biology, GMU, USA.
6. Dr. Patrick Gillevet, Environmental Biocomplexities, GMU, USA.
7. Professor Paul S. Keim, Center for Microbial Genetics & Genomics, North Arizona University,
Flagstaff
8. Dr. Jayaraman Sivaraman, Biochemistry, NUS, Singapore.
Thesis Supervisions
BS (Bioinformatics):
BS (Biosciences):
MS (Bioinformatics):
MS (Microbiology/Immunology):
MS (Microbiology/Immunology):
MS (Microbiology/Immunology):
MS: (Mol.Genetics.):
PhD: (Microbiology/Immunology):
PhD: (Microbiology/Immunology):
PhD: (Microbiology/Immunology):
52 students completed
08 completed
04 completed
04 under supervision
16 completed
03 (Co-supervisor: completed)
02(Co-supervisor: completed)
03 (Completed)
01 (Thesis Submitted)
04 (under supervision)
PhD Thesis Supervised/Under Supervision
S. #
Student’s Name
1
Muhammad Ali Syed
2
Muhammad Idrees
3
Muhammad Ali Shah
4
Fariha Siddique (2nd year)
5
Zobia Noreen
6
Sadaf Azad
7
Sidra Siddiqqui
8
Aftab Ahmad
Thesis title
Year
“Efficacy of DTP vaccine in Local Population and Development of
Rapid Diagnostic Techniques for Microbes”
Pass/2011
Development of a Biosensor for Methyl parathion Detection And
Genetic Risk Assessment of Exposed Population
Completed/20
15
Molecular Characterization of Vibrio cholerae isolates from
Pakistan.
Completed/20
15
Molecular Epidemiology and Phylogenomics of Pakistani Isolates
of Campylobacter jejuni
Submitted
Role of Type VI Secretion System in Stress Adaptations and Under
Developing Control Strategies for Campylobacter jejuni.
Supervision
Development of Rapid Diagnostic Techniques for Detection of Under
Food and Water Borne Diarrheal Pathogens and Control Strategies Supervision
Molecular Epidemiology, Virulence Potential of Escherichia coli Under
Clinical Isolates and Vaccine Development
Supervision
Analysis of Gut Microflora and Paraoxonase 1 (PON1) Mutation in Under
Obese Subjects
Supervision
M. Phil/MS Thesis Supervised/Co-supervised (Microbiology/Immunology/Genetics)
S. #
1
Student’s Name
Muhammad Idrees
2
Uzma Mussarat
3
Yasmeen Badshah
4
Fahad Said
5
Syed Mehmood Qadir
6
Saba Asad
Thesis title
Distribution of antimicrobial resistance patterns among E.
coli isolates from human subjects with UTI and food
animals
Molecular Epidemiological Studies Of E. coli In Urinary Tract
Infections & Antimicrobial Resistance Among Isolates In
Pakistan
Prevalence of Virulence Factors Among Extraintestinal Clinical
Isolates of Escherichia coli Obtained From Clinically Diagnosed
Urinary Tract Infection Patients & Molecular Pathogenesis
Differences of circulating Bordetella pertussis population
in Pakistan
Development of an integrated Green Fluorescent Protein
Based Assay for Diverse High Throughput Screening
(HTS) Applications
Surveillance Of Diarrheogenic Bacterial Pathogens in
Pakistan
by
PCR/restriction
fragment
length
polymorphism (RFLP) and amplified fragment length
polymorphism
Year
2007
2007
2007
2009
2009
2010
Molecular Characterization of Campylobacter jejuni
Strains Isolated from Patients with Gastroenteritis and
Guillain Barre Syndrome
7
8
9
Abrar Wali
Sadia Zafar (MS
Bioinformatics)
Sadaf Afzal (MS
Bioinformatics
10
Ayesha Khan
11
Sarah Zaidi
12
Saba Andleeb
Muhammad Imran (CoSupervised)
13
2010
Modeling and Simulation of Wolinella succinogenes’s
Oligosaccharyl Transferase and Development of
Computational Program for Statistical Analysis of
Proteomes at ExPASy’s Databases
2011
Mathematical Model for sterilization of drinking water
from Diarrheaogenic Bacteria
Phylotyping and Clonal group A screening of Escherichia coli
isolates from Pakistan
Toxic Metals Residues in Poultry Chicken Collected From
Rawalpindi, Pakistan
Sheep Casing as a Biosentinels of Human exposure to MultiResidual contamination
Candidate Gene Analysis of Retinitis Pigmentosa
2011
2012
2013
2014
2007
Ayesha Malik (CoSupervised)
14
“Exclusion Analysis of Retinitis Pigmentosa Gene”
“Synthesis of Novel Photochemical Precursors and Biological
Studies of Metal Barbiturates”
Muhammad Javed (CoStudies of Antibiotic Resistance Patterns & Genetic Diversity in
Supervised)
Campylobacter population isolated from broiler chicken
Molecular Analysis of Bacterial Pathogens Associated with
Sania Akhtar (Co-Supervised) Diarrhea Outbreaks in Pakistan
2007
Sara Riaz (Co-Supervised)
15
16
17
2009
2010
2010