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From: Chromatin Alterations Associated With Down-regulated Metabolic Gene Expression in the Prefrontal Cortex of Subjects With Schizophrenia Arch Gen Psychiatry. 2005;62(8):829-840. doi:10.1001/archpsyc.62.8.829 Figure Legend: Study design. Date of download: 8/3/2017 From: Chromatin Alterations Associated With Down-regulated Metabolic Gene Expression in the Prefrontal Cortex of Subjects With Schizophrenia Arch Gen Psychiatry. 2005;62(8):829-840. doi:10.1001/archpsyc.62.8.829 Figure Legend: The 6 site-specific covalent modifications at the N-terminal tails of histones H3 and H4 studied in the postmortem cohorts. Ac indicates acetylation; Me, methylation; P, phosphorylation; single-letter amino acid codes: K, lysine; S, serine. H3meR17 is histone H3 methylated at arginine 17; H3pS10-acK14 is a dimodified histone, defined by phosphorylation of serine 10 and acetylation of lysine 14. H3acK9/14 is defined by the acetylation of lysines 9 and 14 on histone H3. H3meK4 is defined by the methylation of H3lysine 4. H4acK8 is defined by the acetylation of H4-lysine 8. H4acK12 is defined by the acetylation of H4-lysine 12. Date of download: 8/3/2017 From: Chromatin Alterations Associated With Down-regulated Metabolic Gene Expression in the Prefrontal Cortex of Subjects With Schizophrenia Arch Gen Psychiatry. 2005;62(8):829-840. doi:10.1001/archpsyc.62.8.829 Figure Legend: Histone profile of the human prefrontal cortex. Representative examples of histone immunoblots for matched schizophrenia (S) and control (C) pairs 4, 6, and 8. Note the robust immunoreactivity for each of the 6 histone modifications. Note the increased levels of H3meR17 in S8 compared with C8. The approximate sizes of the immunoreactive bands are as follows: H3, 14.5 kDa; and H4, 10.5 kDa. Date of download: 8/3/2017 From: Chromatin Alterations Associated With Down-regulated Metabolic Gene Expression in the Prefrontal Cortex of Subjects With Schizophrenia Arch Gen Psychiatry. 2005;62(8):829-840. doi:10.1001/archpsyc.62.8.829 Figure Legend: Laminar and cellular distribution of histone immunoreactivity in the postmortem prefrontal cortex. A and B, Sections through the full thickness of the prefrontal cortex stained for Nissl (A) and H3meR17 (B) immunoreactivity. Notice in (B) the punctate staining pattern in cortical layers I through VI but the very weak labeling in white matter (WM). C-L, Digitized images from prefrontal layer III of control 4 (C, E, G, I, and K) and matched subject with schizophrenia 4 (D, F, H, J, and L) stained for Nissl (C and D), H3meR17 (E and F), H3pS10-acK14 (G and H), and H4acK12 (I and J) immunoreactivity. Two sections (K and L) were processed without primary Date of download: 8/3/2017 antibody. Notice the robust histone immunoreactivity in the nuclei. The images were taken at the following magnifications: 2.5 × 10 (A and B) and 40 × 10 (C-L). From: Chromatin Alterations Associated With Down-regulated Metabolic Gene Expression in the Prefrontal Cortex of Subjects With Schizophrenia Arch Gen Psychiatry. 2005;62(8):829-840. doi:10.1001/archpsyc.62.8.829 Figure Legend: Mean levels of histone immunoreactivity (A) and metabolic gene transcripts (B) in 21 subjects with schizophrenia and 21 matched controls. Metabolic gene transcripts (B) are shown after internal normalization to β-actin and log-transformation. There are no statistically significant differences between the 2 cohorts. Error bars indicate standard error of the mean. Date of download: 8/3/2017 From: Chromatin Alterations Associated With Down-regulated Metabolic Gene Expression in the Prefrontal Cortex of Subjects With Schizophrenia Arch Gen Psychiatry. 2005;62(8):829-840. doi:10.1001/archpsyc.62.8.829 Figure Legend: Metabolic gene transcripts in the prefrontal cortex. Digitized images from film autoradiograms of complementary DNA (cDNA) arrays. Representative examples of hybridization signals for 6 genes on the cDNA arrays. Note the intense signal for the gene expressed at high levels (GAPDH) and the lower-intensity signals for the remaining metabolic cDNAs (CRYM, HPRT, OAZ1, PDK2, and UCHL1) (magnification ×1). Date of download: 8/3/2017 From: Chromatin Alterations Associated With Down-regulated Metabolic Gene Expression in the Prefrontal Cortex of Subjects With Schizophrenia Arch Gen Psychiatry. 2005;62(8):829-840. doi:10.1001/archpsyc.62.8.829 Figure Legend: Decreased metabolic gene expression in the prefrontal cortex of subjects with schizophrenia is associated with high levels of H3meR17. A, For each of the 41 matched pairs, relative levels of H3meR17 and levels of metabolic gene transcripts. Dotted vertical line indicates an H3meR17 level of 1.3, the cutoff point for subjects with schizophrenia with H3meR17 levels of 1.3 or greater relative to matched controls (Schiz-H3meR17≥1.3C). The dashed horizontal line indicates zero difference in gene expression between subjects with schizophrenia and controls. Note that the Schiz-H3meR17≥1.3C subgroup (n = 8) lacks subjects with high levels of gene Date of download: 8/3/2017 expression. B, Mean levels of metabolic gene transcripts in subjects with schizophrenia relative to matched controls. Subjects with schizophrenia (n = 41) were divided into the Schiz-H3meR17≥1.3C subgroup (n = 8) and a subgroup with H3meR17 levels of less From: Chromatin Alterations Associated With Down-regulated Metabolic Gene Expression in the Prefrontal Cortex of Subjects With Schizophrenia Arch Gen Psychiatry. 2005;62(8):829-840. doi:10.1001/archpsyc.62.8.829 Figure Legend: Long-term antipsychotic drug treatment does not affect H3 methylation and phosphoacetylation in whole chromatin of the rodent prefrontal cortex. A, Western blot from acid-extracted proteins from the rostral medial cortex of mice treated for 14 days with haloperidol or risperidone. Immunoreactivity for H3pS10-acK14, H3meR17, and H4acK12 in drug-treated animals is comparable to that in their saline-treated littermates. B, Quantitative results for H3pS10-acK14 and H3meR17 immunoreactivity in the rostral medial cortex. Levels in haloperidol- and risperidone-treated animals were normalized to the levels in their saline-treated littermates. Date download: 8/3/2017 Note of that differences between drug- and saline-treated animals are less than 15%. Error bars represent standard error of the mean. From: Chromatin Alterations Associated With Down-regulated Metabolic Gene Expression in the Prefrontal Cortex of Subjects With Schizophrenia Arch Gen Psychiatry. 2005;62(8):829-840. doi:10.1001/archpsyc.62.8.829 Figure Legend: Subgroup model for prefrontal cortex (PFC) hypometabolism in schizophrenia. Of all subjects diagnosed as having schizophrenia, only a portion show down-regulated metabolic gene expression in the PFC. This hypothesis is indirectly supported by findings from in vivo imaging studies because the severity of prefrontal hypoactivity and hypometabolism shows considerable variability among subjects diagnosed as having schizophrenia. Among schizophrenic subjects with PFC hypometabolism/down-regulated metabolic gene expression, there is a subgroup that shows high levels of open chromatin-associated H3 methylation, H3meR17. Alterations in Date download: 8/3/2017 including H3 phosphoacetylation, H3pS10-acK14, may also be associated with prefrontal otherofhistone modifications, hypometabolism and dysregulated metabolic gene transcription. Ac indicates acetylation; H3, histone H3; K, lysine; Me, methylation;