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UPLC Amino Acid Analysis Solution AAAFCO Meeting Washington, DC August 2, 2009 ©2009 Waters Corporation | COMPANY CONFIDENTIAL 0.34 Lys 0.36 AMQ UPLC® Amino Acid Analysis Solution 0.32 0.30 0.28 0.26 0.24 0.08 0.06 Pro Ala Glu Deriv Peak NH3 0.10 His 0.12 Arg Gly Ser 0.14 Asp 0.16 Thr 0.18 Ile Leu Phe Cys 0.20 Tyr Met Val 0.22 0.04 0.02 0.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 Minutes 5.00 5.50 6.00 6.50 7.00 7.50 8.00 ©2009 Waters Corporation | COMPANY CONFIDENTIAL 2 UPLC® Application Solution for Amino Acid Analysis Turn-key UPLC® Amino Acid Analysis application — Optimized for the ACQUITY UPLC System — Dedicated QC-tested column and reagents — Application-specific Performance Qualification — Same result day-to-day, instrument-to-instrument, lab-to-lab, around the world Target Applications — Protein and peptide ID and quantitation — Monitoring cell culture media — Nutritional content of food and feed ©2009 Waters Corporation | COMPANY CONFIDENTIAL 3 Total System Approach Assured Performance ACQUITY UPLC® System with TUV Detector Empower software control Application Start Up Kit Containing: — Manual — CD with method templates and example data/calculations — Necessary instrument accessories AccQ●Tag™ Ultra Chemistry Kit — Reagent — Buffers/diluents/eluents — QC tested ACQUITY UPLC BEH 2.1 x 100mm, 1.7 µm C18 column Add-on Kit for existing ACQUITY UPLC Users ©2009 Waters Corporation | COMPANY CONFIDENTIAL 4 Chemistry of AQC Derivatization O O O H N O N NH2 OH 1o Amino Acid; t1/2 <<1 s O N OH NH + CO2 Derivatized Amino Acids 2o Amino Acid; t1/2 <<1 s H N AMQ H2O t1/2 ~ 15 s N-Hydroxy Succinimide NH O N O O AQC Reagent OH H N O N + N 6-Aminoquinolone (AMQ) N O HO H N H N NH2 N O N bis-aminoquinoline urea (derivatization peak) ©2009 Waters Corporation | COMPANY CONFIDENTIAL 5 Ultra Performance LC® Technology A new class of separation science — Based on chromatography columns with very small particles — Based on instruments designed to take advantage of the small particles Provides improved Resolution, Speed, and Sensitivity with no compromises Suitable for chromatographic applications in general — Appropriate for developing new methods — Appropriate for improving existing methods ©2009 Waters Corporation | COMPANY CONFIDENTIAL 6 Chromatography Principles Mass Transfer / Diffusion Mobile Phase A Analyte Molecules B Porous Particle C ©2009 Waters Corporation | COMPANY CONFIDENTIAL 7 UPLC® Amino Acid Analysis Application Solution ©2009 Waters Corporation | COMPANY CONFIDENTIAL 8 Lys 34 AMQ 36 UPLC® Amino Acid Analysis Application Solution 32 30 28 26 24 08 06 Pro Ala Glu Deriv Peak NH3 10 His 12 Asp Ser 14 Arg Gly 16 Thr 18 Ile Leu Phe Cys 20 Tyr Met Val 22 04 02 00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 Minutes 5.00 5.50 6.00 6.50 7.00 7.50 8.00 ©2009 Waters Corporation | COMPANY CONFIDENTIAL 9 Amino Acid Analysis Application Types Amino Acid Analysis Hydrolysates Cell Culture Food Analysis Physiological Clinical ©2009 Waters Corporation | COMPANY CONFIDENTIAL 10 0.068 0.066 AMQ Analysis of Acid Hydrolyzed BSA 9ng on column Deriv Peak 0.064 0.062 0.060 0.058 0.056 0.054 0.052 0.050 0.048 0.046 Lys 0.044 0.042 0.040 0.038 0.034 0.032 Leu 0.030 0.028 Glu 0.026 0.024 0.022 Val 0.020 Ser 0.008 His 0.006 0.004 Phe Ile Tyr Met 0.010 Arg Gly 0.012 Pro Thr 0.014 Cys 0.016 Ala Asp 0.018 NH3 AU 0.036 0.002 0.000 1.50 2.00 2.50 3.00 3.50 4.00 4.50 Minutes 5.00 5.50 6.00 6.50 7.00 7.50 8.00 ©2009 Waters Corporation | COMPANY CONFIDENTIAL 11 Accuracy of Compositional Analysis Bovine Serum Albumin Amino Acid Expected # Residues *Observed # Residues His 17 15.36 ± 0.19 Ser 28 26.00 ± 0.08 Arg 23 22.37 ± 0.08 Gly 16 17.68 ± 0.20 Asp 54 55.47 ± 0.21 Glu 79 80.68 ± 0.20 Thr 33 31.92 ± 0.06 Ala 47 47.51 ± 0.15 Pro 28 28.35 ± 0.14 Lys 59 57.78 ± 0.38 Tyr 20 20.19 ± 0.08 Met 4 4.16 ± 0.15 Val 36 35.67 ± 0.16 Ile 14 13.15 ± 0.15 Leu 61 63.13 ± 0.19 Phe 27 26.57 ± 0.13 * Mean ± Standard Deviation for 75 independent analyses ©2009 Waters Corporation | COMPANY CONFIDENTIAL 12 Measuring Protein Concentration Amino Acid Analysis Sample ID Total µg AA / mL Hydrolysate BSA 1-1 699.64 BSA 1-2 694.09 BSA 1-3 697.88 BSA 1-4 698.21 BSA 1-5 695.43 BSA 2-1 716.66 BSA 2-2 717.87 BSA 2-3 715.65 BSA 2-4 709.75 BSA 2-5 707.93 BSA 3-1 714.93 BSA 3-2 711.50 BSA 3-3 708.46 BSA 3-4 708.14 BSA 3-5 708.10 BSA 4-1 674.16 BSA 4-2 678.43 BSA 4-3 683.07 BSA 4-4 678.62 BSA 4-5 678.94 BSA 5-1 591.4 BSA 5-2 604.3 BSA 5-3 571.78 BSA 5-4 571.57 BSA 5-5 599.18 Mean 677.43 Standard Deviation 47.98 % RSD 7.08 ©2009 Waters Corporation | COMPANY CONFIDENTIAL 13 NVa Ile Leu Phe Tyr Met Val AABA Pro Glu Asp MetSO2 Arg Gly Tau Cya His NH3 Ser Thr Protein Hydrolysate 20X Dilution of Concentrate A 55 CM Cys Ala PE Cys Cys Deriv Peak Lys Method Options Bound vs. Free Amino Acids 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 3.00 Ile Leu Phe Trp Val NVa Met Tyr Cys AABA HyLys1 HyLys2 Pro GABA Ala Asp Ser 2.50 Thr Deriv Peak 2.00 Gln Arg Gly Tau Glu 1.50 Asn His NH3 HyPro Cell Culture Media 10X Dilution of Concentrate A 60 Lys Orn AMQ Minutes 3.50 4.00 4.50 Minutes 5.00 5.50 6.00 6.50 7.00 7.50 8.00 ©2009 Waters Corporation | COMPANY CONFIDENTIAL 14 Amino Acid Analysis Application Types Amino Acid Analysis Hydrolysates Cell Culture Food Analysis Physiological Clinical •Nutritional Content •Absolute amount of amino acids •Complex sample handling •Identification/Adulteration •Unusual amino acids •Marker amino acids •Proprietary •Criteria •Unequivocal identification •Accuracy, precision, linearity •Sensitivity and speed •Rugged and robust ©2009 Waters Corporation | COMPANY CONFIDENTIAL 15 Amino Acid Analysis of Foods and Feeds Nutritional monitoring — Total protein required to support health — Proportions of specific amino acids required o Essential amino acids that are not synthesized by the animal o Growth-limiting nutrients Identity testing — Free amino acids related to metabolic pathways — Free amino acids derived from the environment of the product ©2009 Waters Corporation | COMPANY CONFIDENTIAL 16 Foods and Feeds Analysis 1.00 1.50 2.00 ILe Leu Phe AABA Derivitization Peak Cys Lys Tyr Met Val NVa Pro Ala Thr Glu Asp MetSO2 Ser Arg Gly His NH3 Cya Tau AMQ 10 pmol Standard on Column 2.50 3.00 3.50 4.00 4.50 Minutes 5.00 5.50 6.00 6.50 7.00 7.50 8.00 ©2009 Waters Corporation | COMPANY CONFIDENTIAL 17 0.052 AMQ Analysis of Soybean Meal Hydrolysate Deriv Peak 0.050 0.048 0.046 0.044 0.042 0.040 0.038 0.036 0.034 0.032 0.030 Glu 0.026 0.020 Leu Lys 0.022 Ala Cys 0.006 His 0.004 Ile Tyr 0.008 Arg Ser 0.010 Thr Gly 0.012 Met 0.014 Pro 0.016 Val Asp 0.018 Phe 0.024 NH3 AU 0.028 0.002 0.000 1.50 2.00 2.50 3.00 3.50 4.00 4.50 Minutes 5.00 5.50 6.00 6.50 7.00 7.50 8.00 ©2009 Waters Corporation | COMPANY CONFIDENTIAL 18 Analysis of Soybean Meal Hydrolysate Amino Acid Weight % Amino Acid Weight % His 1.87 ± 0.03 Pro 3.86 ± 0.03 Ser 3.65 ± 0.02 Lys 4.67 ± 0.03 Arg 5.82 ± 0.03 Tyr 2.90 ± 0.02 Gly 2.98 ± 0.02 Met 1.08 ± 0.02 Asp 9.06 ± 0.05 Val 3.66 ± 0.02 Glu 14.49 ± 0.08 Ile 3.45 ± 0.02 Thr 2.92 ± 0.02 Leu 6.12 ± 0.03 Ala 3.17 ± 0.02 Phe 3.92 ± 0.02 Mean ± Standard Deviation for 75 independent replicate analyses ©2009 Waters Corporation | COMPANY CONFIDENTIAL 19 Leu Phe Ile Val Met Cys Tyr Pro Ala Lys Deriv Peak Glu Asp His 0.005 Thr 0.010 Arg NH3 AU 0.015 Gly Poultry Diet 0.020 Ser 0.025 AMQ Analysis of Hydrolyzed Grains and Complex Feeds Phe Ile Met Tyr Val Lys Leu Deriv Peak Pro Cys His 0.005 Thr Ser 0.010 Ala Glu NH3 AU 0.015 Asp Swine Diet 0.020 Arg Gly 0.025 AMQ 0.000 Phe Ile Met Cys Tyr Val Leu Lys Deriv Peak Ala His 0.005 Thr Ser 0.010 Pro Asp NH3 AU 0.015 Glu Whole Soybean 0.020 Arg Gly 0.025 AMQ 0.000 Phe Ile Met Cys Tyr Val Leu Lys Deriv Peak Glu His 0.005 Pro 0.010 Ala Ser 0.015 Thr NH3 AU Asp Soybean Meal 0.020 Arg Gly 0.025 AMQ 0.000 0.000 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 Minutes 5.50 6.00 6.50 7.00 7.50 8.00 ©2009 Waters Corporation | COMPANY CONFIDENTIAL 20 Asn Free Amino Acids in Starting Malts for Brewing Process 0.0105 0.0100 0.0095 0.0090 0.0085 Gln 0.0080 0.0075 0.0070 0.0065 Asp 0.0060 Ser AU 0.0055 0.0050 0.0040 0.0035 Gly Arg 0.0045 0.0030 0.0025 0.0020 0.0015 0.0010 0.0005 0.0000 1.80 1.90 2.00 2.10 2.20 2.30 2.40 2.50 2.60 Minutes 2.70 2.80 2.90 3.00 3.10 3.20 3.30 ©2009 Waters Corporation | COMPANY CONFIDENTIAL 21 Free Amino Acids Levels Starting Malt 35.00 30.00 2-Row Malt 25.00 Mole % 6-Row Malt 20.00 Pilsener Malt 15.00 10.00 5.00 0.00 Pro Asn Gln Amino Acids Leu ©2009 Waters Corporation | COMPANY CONFIDENTIAL 22 Amino Acid Analysis Application Types Amino Acid Analysis Hydrolysates Cell Culture Food Analysis Physiological Clinical •Turnkey Analyzer •Regulated and Validated •Diagnosis of Metabolic Defects •Nutritional Monitoring •Separate solution for Research use only ©2009 Waters Corporation | COMPANY CONFIDENTIAL 23 MassTrak™ Amino Acid Analysis Solution FOR RESEARCH USE ONLY. NOT FOR USE IN DIAGNOSTIC PROCEDURES ©2009 Waters Corporation | COMPANY CONFIDENTIAL 24 0.120 AMQ Physiological Amino Acid Standard Orn 0.110 0.100 Lys 0.090 HCys Trp Nva Val Cys 0.020 Phe Cyst GABA AADA Pro BAIB Hyl1 Hyl2 AABA Ala Ile aIle Leu Sar 0.030 B-Ala Thr 0.040 Glu Cit 0.050 HyPro NH3 His PEA Asn 3MH Tau 1MH Ser Gln Carn Arg Gly Ans EA Asp 0.060 PSer AU 0.070 Tyr Peak Derivatization Met 0.080 0.010 0.000 4.00 6.00 8.00 10.00 12.00 14.00 16.00 18.00 Minutes 20.00 22.00 24.00 26.00 28.00 30.00 32.00 ©2009 Waters Corporation | COMPANY CONFIDENTIAL 25 0.120 AMQ MassTrak™ Amino Acid Analysis Plasma Sample 0.110 Lys Derivatization Peak 0.100 0.090 0.060 4.00 6.00 8.00 10.00 12.00 16.00 Val 18.00 Minutes Nva 20.00 22.00 24.00 26.00 28.00 Trp Phe Leu Ile aIle Met Cys BAIB AADA 14.00 Hyl2 AABA Tyr Thr 0.000 B-Ala Cit EA Asp Glu Arg Carn His Asn 3MH Tau 1MH 0.020 0.010 Ser 0.030 Orn Gly 0.040 Pro NH3 0.050 HyPro AU 0.070 Ala Gln 0.080 30.00 32.00 ©2009 Waters Corporation | COMPANY CONFIDENTIAL 26 UPLC® Amino Acid Analysis Application Solution Turnkey System — Newly developed analytical method — Based on established chemistry and instruments — Components tested for ruggedness Demonstrated for most common applications — Protein structure — Cell culture — Nutritional analysis of foods and feeds Right Answer Assured ©2009 Waters Corporation | COMPANY CONFIDENTIAL 27