Survey
* Your assessment is very important for improving the work of artificial intelligence, which forms the content of this project
* Your assessment is very important for improving the work of artificial intelligence, which forms the content of this project
Phenotypic Characterisation of an Outbreak Strain of Salmonella enterica serovar Heidelberg Claire Fingleton Galway-Mayo Institute of Technology Contents 1. Introduction 2. Methods & Results 3. Conclusions 4. Future Work Introduction Salmonella Heidelberg strain SH2107 Infection outbreak across 34 states 136 cases, 37 hospitalisations, 1 death FDA investigation & product recall Project Aim: Phenotypic characterisation of SH2107 outbreak strain, in order to gain understanding of its pathogenicity. Methods of Characterisation 1. Resistance profiling 4. Biofilm Formation 2. Curli Fimbriae expression 5. Motility: (a) Swim (b) Swarm Control: S. Typhimurium ATCC 14028 Reference: S. Heidelberg NCTC 5717 Outbreak: S. Heidelberg SH2107 3. Cellulose Biosynthesis 6. Acid Tolerance 1. Resistance Profiling Outbreak Strain → Multi-Drug Resistant Phenotype Antimicrobial Class Antimicrobial Amoxicillin Penicillins Ampicillin Carbenicillin Aminoglycosides Gentamicin Tobramycin Tetracycline Tetracyclines Doxycycline Minocycline Key: Sensitive Intermediate Resistant Reference Outbreak 2. Curli Fimbriae Expression Control Reference Outbreak • Red, dry and rough (RDAR) • Red and smooth (RAS) • Red and smooth (RAS) • Curli Fimbriae expression • Absent / Low level expression • Absent / Low level expression 3. Cellulose Biosynthesis Control Reference Outbreak Strong cellulose biosynthesis Low level cellulose biosynthesis Low level cellulose biosynthesis 4. Biofilm Assay in Defined Media and Temperature Conditions Absorbance at 570 nm 2.0 1.5 1.0 0.5 0.0 LB / LB / M9 / M9 / LB / LB / M9 / M9 / LB / LB / M9 / M9 / 25°C 37°C 25°C 37°C 25°C 37°C 25°C 37°C 25°C 37°C 25°C 37°C Control Control Reference Reference Outbreak Outbreak 5. Swim Motility Assay Diameter of region of spread (mm) Swim Motility of Isolates following 8 Hours Incubation 80 60 Room Temp 40 37°C 20 0 Control Reference Outbreak 6. Acid Tolerance Assay 100 Control Reference % Survival 80 Outbreak 60 40 20 0 0 30 60 90 120 150 Time 180 (Min) Conclusions SH2107 Pathogenicity Multi-Drug Resistant Phenotype Evasion of Innate Immune System Lack of Curli Fimbriae Increased Acid Tolerance Future Work References • Centers for Disease Control and Prevention (CDC), (2013a). Antibiotic Resistance Threats in the United States, 2013. [Online] Available at: http://www.cdc.gov/drugresistance/pdf/ar-threats-2013508.pdf [Accessed: 01/04/2015] • Finn, S., Hinton, J.C., McClure, P., Amezquita, A., Martins, M. and Fanning, S. (2013). Phenotypic characterization of Salmonella isolated from food production environments associated with lowwater activity foods. J Food Prot. 76, (9), 1488-99(Foster and Hall, 1990; Foster, 1991) • Jefferson, K.K. (2004). What drives bacteria to produce a biofilm?. FEMS Microbiol Lett. 236, (2), 163-173. • Kearns, D.B. (2010). A field guide to bacterial swarming motility. Nat Rev Micro. 8, (9), 634-644. • Keestra-Gounder, A.M., Tsolis, R.M. and Baumler, A.J. (2015). Now you see me, now you don't: the interaction of Salmonella with innate immune receptors. Nat Rev Micro.13 (4), 206-216. • Lynne, A.M., Kaldhone, P., David, D., White, D.G. and Foley, S.L. (2008) Characterization of Antimicrobial Resistance in Salmonella enterica Serotype Heidelberg Isolated from Food Animals. Foodborne Pathog Dis . 6 (2), 207-215. • National Antimicrobial Resistance Monitoring System: Enteric Bacteria (NARMS), (2014). National Antimicrobial Resistance Monitoring System: Enteric Bacteria. Human Isolates Annual Report 2012.Atlanta, Georgia. [Online] Available at: http://www.cdc.gov/narms/pdf/2012-annual-reportnarms-508c.pdf [Accessed 21/03/2015] • Porwollik, S. (Ed) (2011). Salmonella: From Genome to Function. Caister Academic Press. San Diego, USA • Riesenberg-Wilmes, M.R., Bearson, B., Foster, J.W. and Curtis, R. (1996). Role of the acid tolerance response in virulence of Salmonella Typhimurium. Infect Immun. 64, (4), 1085-1092. • Romling, U. (2005).'Characterization of the rdar morphotype, a multicellular behaviour in Enterobacteriaceae. Cell Mol Life Sci. 62, (11), 1234-46.