Download elife-16844-fig1-data1

Fold
enrichment
(detached vs.
attached)
1620.792946
1324.931564
1139.789798
947.6848454
shRNA sequence
Gene symbol
Gene name
TAACACTTCACTGTAACTC
AAATGCTTCACAATCAAAG
TAATCTTCAAATAAGCTGA
TCACTTACAAGTTTCTTTC
ZCCHC24
KDM3A
RALBP1
RFC1
848.4223889
798.0503961
AATATAAGGATTGCTATCG
TTAAGTAGCTTAGAGAGGG
LRIG3
PIH1D3
720.0231915
710.1463302
TGTCATTCCAAGAGATCCT
ATTTGCCGGAGGATCAAGG
DKK1
SENP6
681.0095893
AATCTAATACATTAATCTG
PLEKHG1
671.1327279
665.2066111
TTGGAGATGAGGCTCAGTG
TAATCCAATAATTCATTTC
FGD5
LOC339524
zinc finger CCHC-type containing 24
lysine demethylase 3A
ralA binding protein 1
Replication factor C subunit 1
leucine-rich repeats and
immunoglobulin like domains 3
PIH1 domain containing 3
dickkopf WNT signaling pathway
inhibitor 1
SUMO1/sentrin specific peptidase 6
pleckstrin homology and RhoGEF
domain containing G1
FYVE, RhoGEF and PH domain
containing 5
659.2804943
645.3541198
633.6006548
TTAAAATGGAGACACCATC
ATTCCTTCAAGATTTCAAG
TCTCTGATGCTGAGTAAGG
METAP1D
VMP1
ZNF345
619.2792059
610.5022036
609.6640814
TTCTATCGAATAAGCAATC
TTACGTTTCTGAATTTCTG
AACTTATAGACATTCAGAC
FAM227B
PDE7A (variant 2)
GPC5
605.9454431
598.4192748
TTCCCTCACATGTGGGATG
ATTGAAATATTGAAACTTC
AP4M1
SUSD1
561.9934101
ATAGAGAAAGTCTTTATAC
RBFOX3
559.5241948
TAGAATAAGAACTACTGTC
DNAJB9
543.6619555
527.4243955
TTAATCTTATCTTTGCCTG
TGAAAGACTTAACAATTGG
CYP39A1
CECR5-AS1
526.4367093
TAACTTCAAAGGTGTATCC
ADH7
518.5352203
513.1029465
ATAGATATATGCATTTAGG
TATTAGGAATCTTAACCAC
RNF125
HOXA11
methionyl aminopeptidase type 1D
(mitochondrial)
vacuole membrane protein 1
zinc finger protein 345
family with sequence similarity 227
member B
phosphodiesterase 7A
glypican 5
adaptor related protein complex 4
mu 1 subunit
sushi domain containing 1
RNA binding protein, fox-1 homolog
(C. elegans) 3
DnaJ heat shock protein family
(Hsp40) member B9
cytochrome P450 family 39
subfamily A member 1
CECR5 antisense RNA 1
alcohol dehydrogenase 7 (class IV),
mu or sigma polypeptide
ring finger protein 125, E3 ubiquitin
protein ligase
homeobox A11