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Chapter 11 The Prokaryotes: Domains Bacteria and Archaea Copyright © 2010 Pearson Education, Inc. Lectures prepared by Christine L. Case The Prokaryotes Copyright © 2010 Pearson Education, Inc. Domain Bacteria Proteobacteria From the mythical Greek god Proteus, who could assume many shapes Gram-negative Chemoheterotrophic Copyright © 2010 Pearson Education, Inc. The Alphaproteobacteria Pelagibacter ubique Discovered by FISH technique 20% of prokaryotes in oceans 0.5% of all prokaryotes 1354 genes Copyright © 2010 Pearson Education, Inc. The Alphaproteobacteria Human pathogens Bartonella B. henselae: Cat-scratch disease Brucella: Brucellosis Ehrlichia: Tickborne Copyright © 2010 Pearson Education, Inc. The Alphaproteobacteria Obligate intracellular parasites Ehrlichia: Tickborne, ehrlichiosis Rickettsia: Arthropod-borne, spotted fevers R. prowazekii: Epidemic typhus R. typhi: Endemic murine typhus R. rickettsii: Rocky Mountain spotted fever Copyright © 2010 Pearson Education, Inc. Rickettsias Copyright © 2010 Pearson Education, Inc. Figure 11.1 The Alphaproteobacteria Wolbachia: Live in insects and other animals Copyright © 2010 Pearson Education, Inc. Applications p. 307 Wolbachia Copyright © 2010 Pearson Education, Inc. Applications p. 307 The Alphaproteobacteria Have prosthecae Caulobacter: Stalked bacteria found in lakes Hyphomicrobium: Budding bacteria found in lakes Copyright © 2010 Pearson Education, Inc. Figures 11.2b, 11.3 The Alphaproteobacteria Plant pathogen Agrobacterium: Insert a plasmid into plant cells, inducing a tumor Copyright © 2010 Pearson Education, Inc. Figure 9.19 The Alphaproteobacteria Chemoautotrophic Oxidize nitrogen for energy Fix CO2 Nitrobacter: NH3 NO2– Nitrosomonas: NO2– NO3– Copyright © 2010 Pearson Education, Inc. The Alphaproteobacteria Nitrogen-fixing bacteria Azospirillum Grow in soil, using nutrients excreted by plants Fix nitrogen Rhizobium Fix nitrogen in the roots of plants Copyright © 2010 Pearson Education, Inc. Figure 27.5 The Alphaproteobacteria Produce acetic acid from ethanol Acetobacter Gluconobacter Copyright © 2010 Pearson Education, Inc. Copyright © 2010 Pearson Education, Inc. The Betaproteobacteria Thiobacillus Chemoautotrophic; oxidize sulfur: H2S SO42– Sphaerotilus Chemoheterotophic; form sheaths Copyright © 2010 Pearson Education, Inc. Figure 11.5 The Betaproteobacteria Neisseria Chemoheterotrophic; cocci N. meningitidis N. gonorrhoeae Copyright © 2010 Pearson Education, Inc. Figure 11.6 The Betaproteobacteria Spirillum Chemoheterotrophic; helical Copyright © 2010 Pearson Education, Inc. Figure 11.4 The Betaproteobacteria Bordetella Chemoheterotrophic; rods B. pertussis Burkholderia Nosocomial infections Copyright © 2010 Pearson Education, Inc. Figure 24.7 The Betaproteobacteria Zoogloea Slimy masses in aerobic sewage-treatment processes Copyright © 2010 Pearson Education, Inc. Figure 27.20 The Gammaproteobacteria Pseudomonadales Pseudomonas Opportunistic pathogens Metabolically diverse Polar flagella Copyright © 2010 Pearson Education, Inc. Figure 11.7 The Gammaproteobacteria Pseudomonadales Moraxella Conjunctivitis Azotobacter and Azomonas Nitrogen fixing Copyright © 2010 Pearson Education, Inc. The Gammaproteobacteria Legionellales Legionella Found in streams, warm-water pipes, cooling towers L. pneumophilia Coxiella Q fever transmitted via aerosols or milk Copyright © 2010 Pearson Education, Inc. Figure 24.14b The Gammaproteobacteria Vibrionales Found in coastal water Vibrio cholerae causes cholera V. parahaemolyticus causes gastroenteritis Copyright © 2010 Pearson Education, Inc. Figure 11.8 The Gammaproteobacteria Enterobacteriales (enterics) Peritrichous flagella; facultatively anaerobic Copyright © 2010 Pearson Education, Inc. Enterobacter Erwinia Escherichia Klebsiella Proteus Salmonella Serratia Shigella Yersinia The Gammaproteobacteria Copyright © 2010 Pearson Education, Inc. Figure 11.9a The Gammaproteobacteria Copyright © 2010 Pearson Education, Inc. Figure 11.9b The Gammaproteobacteria Pasteurellales Pasteurella Cause pneumonia and septicemia Haemophilus Require X (heme) and V (NAD+, NADP+) factors Copyright © 2010 Pearson Education, Inc. The Gammaproteobacteria Beggiatoa Chemoautotrophic; oxidize H2S to S0 for energy Francisella Chemoheterotrophic; tularemia Copyright © 2010 Pearson Education, Inc. The Deltaproteobacteria Bdellovibrio Prey on other bacteria Copyright © 2010 Pearson Education, Inc. Figure 11.10 The Deltaproteobacteria Desulfovibrionales Use S instead of O2 as final electron acceptor Copyright © 2010 Pearson Education, Inc. The Deltaproteobacteria Myxococcales Gliding Cells aggregate to form myxospores Copyright © 2010 Pearson Education, Inc. Figure 11.11 The Epsilonproteobacteria Campylobacter One polar flagellum Gastroenteritis Copyright © 2010 Pearson Education, Inc. The Epsilonproteobacteria Helicobacter Multiple flagella Peptic ulcers Stomach cancer Copyright © 2010 Pearson Education, Inc. Figure 11.12 Phototrophic Oxygenic photosynthesis Anoxygenic photosynthesis 2H2O + CO2 2H2S + CO2 Copyright © 2010 Pearson Education, Inc. light light (CH2O) + H2O + O2 (CH2O) + H2O + 2S0 Oxygenic Photosynthetic Bacteria Cyanobacteria Gliding motility Fix nitrogen Copyright © 2010 Pearson Education, Inc. Cyanobacteria Copyright © 2010 Pearson Education, Inc. Figure 11.13 Anoxygenic Photosynthetic Bacteria Purple sulfur Purple nonsulfur Green sulfur Green nonsulfur Copyright © 2010 Pearson Education, Inc. Purple Sulfur Bacteria Copyright © 2010 Pearson Education, Inc. Figure 11.14 Firmicutes Low G + C Gram-positive Copyright © 2010 Pearson Education, Inc. Clostridiales Clostridium Endospore-producing Obligate anaerobes Copyright © 2010 Pearson Education, Inc. Figure 11.15 Clostridiales Epulopiscium Copyright © 2010 Pearson Education, Inc. Figure 11.16 Bacillales Bacillus Endospore–producing rods Copyright © 2010 Pearson Education, Inc. Figure 11.17b Bacillales Staphylococcus Cocci Copyright © 2010 Pearson Education, Inc. Figure 11.18 Lactobacillales Generally aerotolerant anaerobes; lack an electrontransport chain [Insert Figure 11.19] Lactobacillus Streptococcus Enterococcus Listeria Copyright © 2010 Pearson Education, Inc. Figure 11.19 Mycoplasmatales Wall-less; pleomorphic 0.1 - 0.24 µm M. pneumoniae Copyright © 2010 Pearson Education, Inc. Figure 11.20a, b Actinobacteria High G + C Gram-positive Copyright © 2010 Pearson Education, Inc. Actinobacteria Actinomyces Corynebacterium Frankia Gardnerella Mycobacterium Nocardia Propionibacterium Streptomyces Copyright © 2010 Pearson Education, Inc. Streptomyces Copyright © 2010 Pearson Education, Inc. Figure 11.21 Streptomyces Copyright © 2010 Pearson Education, Inc. Figure 11.21 Actinomyces Copyright © 2010 Pearson Education, Inc. Figure 11.22 Planctomycetes Gemmata obscuriglobus Double internal membrane around DNA Copyright © 2010 Pearson Education, Inc. Figure 11.23 Chlamydias Chlamydia trachomatis Trachoma STI, urethritis Chlamydophila pneumoniae Chlamydophila psittaci Psittacosis Copyright © 2010 Pearson Education, Inc. Figure 11.24b Life Cycle of the Chlamydias Copyright © 2010 Pearson Education, Inc. Figure 11.24a Spirochetes Borrelia Leptospira Treponema Copyright © 2010 Pearson Education, Inc. Figure 11.25 Bacteroidetes Anaerobic Bacteroides are found in the mouth and large intestine Cytophaga: Cellulose-degrading in soil Copyright © 2010 Pearson Education, Inc. Fusobacteria Fusobacterium Are found in the mouth May be involved in dental diseases Copyright © 2010 Pearson Education, Inc. Figure 11.26 Domain Archaea Extremophiles Hyperthermophiles Pyrodictium Sulfolobus Methanogens Methanobacterium Extreme halophiles Halobacterium Copyright © 2010 Pearson Education, Inc. Archaea Copyright © 2010 Pearson Education, Inc. Figure 11.27 Microbial Diversity Bacteria size range Thiomargarita (750 µm) Nanobacteria (0.02 µm) in rocks Copyright © 2010 Pearson Education, Inc. Figure 11.28 Microbial Diversity PCR indicates up to 10,000 bacteria per gram of soil. Many bacteria have not been identified because they Haven't been cultured Need special nutrients Are a part of complex food chains requiring the products of other bacteria Need to be cultured to understand their metabolism and ecological role Copyright © 2010 Pearson Education, Inc. Q&A Bacteria are singlecelled organisms that must absorb their nutrients by simple diffusion. The dimensions of T. namibiensis are several hundred times larger than most bacteria, much too large for simple diffusion to operate. How does the bacterium solve this problem? Copyright © 2010 Pearson Education, Inc.