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24.1 Introduction to Carbohydrates • Carbohydrates (sugars) are abundant in nature: – They are high energy biomolecules. – They provide structural rigidity for organisms (plants, crustaceans, etc.). – The polymer backbone on which DNA and RNA are assembled contains sugars. • The term, carbohydrate, evolved to describe the formula for such molecules: Cx(H2O)x. • Carbohydrates are NOT true hydrates. WHY? Copyright 2012 John Wiley & Sons, Inc. 24-1 Klein, Organic Chemistry 1e • Carbohydrates (sugars) are polyhydroxy aldehydes or ketones. – Consider glucose, which is made by plants: – Describe the potential energy change that occurs during glucose photosynthesis. – Is glucose a polyhydroxy aldehyde or ketone? Copyright 2012 John Wiley & Sons, Inc. 24-2 Klein, Organic Chemistry 1e 24.2 Classification of Monosaccharides • Saccharides have multiple chiral centers, and they are often drawn as Fischer projections. – Designate each chirality center in glucose as either R or S. Copyright 2012 John Wiley & Sons, Inc. 24-3 Klein, Organic Chemistry 1e • Saccharides have multiple chiral centers, and they are often drawn as Fischer projections. • What does the suffix, “ose” mean? • Define the following terms: – Aldose and ketose – Pentose and hexose Copyright 2012 John Wiley & Sons, Inc. 24-4 Klein, Organic Chemistry 1e • Glyceraldehyde is a monosaccharide with one chirality center. – Natural glyceraldehyde is dextrorotatory (D): it rotates plane polarized light in the clockwise direction. Copyright 2012 John Wiley & Sons, Inc. 24-5 Klein, Organic Chemistry 1e 24.2 Classification of Monosaccharides • Naturally occurring larger sugars can be broken down into glyceraldehyde by degradation. • Such sugars are often called D-sugars. Copyright 2012 John Wiley & Sons, Inc. 24-6 Klein, Organic Chemistry 1e 24.2 Classification of Monosaccharides • Recall that dextrorotatory versus levorotatory rotation cannot be predicted by the R or S configuration. • Here, D no longer refers to dextrorotatory. Rather it refers to the R configuration at the chiral carbon farthest from the carbonyl. Copyright 2012 John Wiley & Sons, Inc. 24-7 Klein, Organic Chemistry 1e 24.3 Configuration of Aldoses • There are four aldotetroses. Two are shown below. • What are the other two structures? Copyright 2012 John Wiley & Sons, Inc. 24-8 Klein, Organic Chemistry 1e 24.3 Configuration of Aldoses • Aldopentoses have three chirality centers. The number of isomers will be 23. • Recall the 2n rule from Section 5.5. • The D-sugars are naturally occurring. Copyright 2012 John Wiley & Sons, Inc. 24-9 Klein, Organic Chemistry 1e 24.3 Configuration of Aldoses • Ribose is a key building block of RNA. – WHAT is RNA? More detail to come in Section 24.10. • Arabinose is found in plants. • Xylose is found in wood. Copyright 2012 John Wiley & Sons, Inc. 24-10 Klein, Organic Chemistry 1e 24.3 Configuration of Aldoses • • • • Based on the 2n rule, how many aldohexoses are there? How many of the aldohexoses are D isomers. Glucose is the most common aldohexose. Mannose and galactose are also common. Copyright 2012 John Wiley & Sons, Inc. 24-11 Klein, Organic Chemistry 1e 24.4 Configuration of Ketoses • Relevant ketoses have between three and six carbons. • For each naturally occurring D isomer, there is an L enantiomer. Copyright 2012 John Wiley & Sons, Inc. 24-12 Klein, Organic Chemistry 1e 24.4 Configuration of Ketoses Copyright 2012 John Wiley & Sons, Inc. 24-13 Klein, Organic Chemistry 1e 24.5 Cyclic Structures of Monosaccharides • Recall from Section 20.5 that carbonyls can be attacked by alcohols to form hemiacetals. – The intramolecular reaction is generally favored for 5 and 6membered rings. WHY? Copyright 2012 John Wiley & Sons, Inc. 24-14 Klein, Organic Chemistry 1e 24.5 Cyclic Structures of Monosaccharides • For the following compound, draw the mechanism and resulting product that results from acid catalyzed ringclosing hemiacetal formation. Copyright 2012 John Wiley & Sons, Inc. 24-15 Klein, Organic Chemistry 1e 24.5 Cyclic Structures of Monosaccharides • Monosaccharides, like glucose, can also undergo ringclosing hemiacetal formation. • The equilibrium greatly favors the closed form called pyranose. Copyright 2012 John Wiley & Sons, Inc. 24-16 Klein, Organic Chemistry 1e Copyright 2012 John Wiley & Sons, Inc. 24-17 Klein, Organic Chemistry 1e • Distinguish between the α and β anomers. Copyright 2012 John Wiley & Sons, Inc. 24-18 Klein, Organic Chemistry 1e Anomeric effect • Which would you predict to be more stable? – Beta 67% , alpha 33%, open 0.01% 19 24.5 Cyclic Structures of Monosaccharides • Ketoses form both furanose (5-membered) and pyranose (6-membered) rings: Copyright 2012 John Wiley & Sons, Inc. 24-24 Klein, Organic Chemistry 1e 24.5 Cyclic Structures of Monosaccharides 70% β 2% α 0.7% 23%-β 5%-α • The equilibrium concentrations in water are above. Copyright 2012 John Wiley & Sons, Inc. 24-25 Klein, Organic Chemistry 1e 24.5 Cyclic Structures of Monosaccharides • The furanose form takes part in most biochemical reactions. Copyright 2012 John Wiley & Sons, Inc. 24-26 Klein, Organic Chemistry 1e 24.6 Reactions of Monosaccharides • Monosaccharides are generally soluble in water. WHY? • To improve their solubility in organic solvents, the hydroxyl groups can be acetylated. • WHY is pyridine added to the reaction? • How might acetylation help in purification efforts. Copyright 2012 John Wiley & Sons, Inc. 24-27 Klein, Organic Chemistry 1e 24.6 Reactions of Monosaccharides • Monosaccharides can also be converted to ethers via the Williamson ether synthesis. • Ether linkages are more robust than ester linkages. WHY? Copyright 2012 John Wiley & Sons, Inc. 24-28 Klein, Organic Chemistry 1e 24.6 Reactions of Monosaccharides • When treated with an excess of an alcohol, the hemiacetal equilibrium can be shifted to give an acetal. • When a sugar is used, alpha and beta glycosides are formed. Copyright 2012 John Wiley & Sons, Inc. 24-29 Klein, Organic Chemistry 1e 24.6 Reactions of Monosaccharides • The mechanism of glycoside formation is analogous to the acetal formation mechanism. • Only the anomeric hydroxyl group is replaced. Copyright 2012 John Wiley & Sons, Inc. 24-30 Klein, Organic Chemistry 1e 24.6 Reactions of Monosaccharides • The mechanism of glycoside formation is analogous to the acetal formation mechanism. • What factors would you consider when trying to predict whether the alpha or beta anomer will be the major product? • Practice with CONCEPTUAL CHECKPOINTs 24.28 and 24.29. Copyright 2012 John Wiley & Sons, Inc. 24-31 Klein, Organic Chemistry 1e 24.6 Reactions of Monosaccharides • Under strongly basic conditions, glucose and mannose interconvert. • Mannose and glucose are epimers because they only differ in the configuration of one carbon center. • Practice with CONCEPTUAL CHECKPOINT 24.30. Copyright 2012 John Wiley & Sons, Inc. 24-32 Klein, Organic Chemistry 1e 24.6 Reactions of Monosaccharides • Monosaccharides can be reduced to ALDITOLs shifting the equilibrium to the right. HOW? – D-sorbitol or D-glucitol are sugar substitutes. Copyright 2012 John Wiley & Sons, Inc. 24-33 Klein, Organic Chemistry 1e Reducing sugars • If the sugar has an –OH attached to the anomeric carbon, then the sugar is a reducing sugar • If it has –OR, then it is not a reducing sugar Copyright 2012 John Wiley & Sons, Inc. 24 -34 Klein, Organic Chemistry 1e 24.6 Reactions of Monosaccharides • Practice with SKILLBUILDER 24.4. Copyright 2012 John Wiley & Sons, Inc. 24-37 Klein, Organic Chemistry 1e 24.7 Disaccharides • Disaccharides form when two sugars connect through a glycosidic linkage. – The 1 4 glycosidic linkage is most common. – The bottom ring is capable of mutarotation at its anomeric position. – Because the anomeric position of the bottom ring is a HEMIACETAL rather than an acetal, it is in equilibrium with the open form. Thus, maltose is a reducing sugar. Copyright 2012 John Wiley & Sons, Inc. 24-42 Klein, Organic Chemistry 1e 24.7 Disaccharides • Cellobiose is similar to maltose. WHAT are the differences? • Will cellobiose be a reducing sugar? Copyright 2012 John Wiley & Sons, Inc. 24-43 Klein, Organic Chemistry 1e 24.7 Disaccharides • Lactose is another disaccharide. • Some people have trouble digesting lactose. Copyright 2012 John Wiley & Sons, Inc. 24-44 Klein, Organic Chemistry 1e 24.7 Disaccharides • Sucrose (table sugar) is also a disaccharide. – Honey bees can convert sucrose into a mixture of sucrose, fructose, and glucose. – Fructose is very sweet. • Sucrose is not a reducing sugar. WHY? Copyright 2012 John Wiley & Sons, Inc. 24-45 Klein, Organic Chemistry 1e 24.8 Polysaccharides • Cellulose is a polysaccharide containing 7000–12000 glucose units connected through glycosidic bonds. • How is cellulose capable of giving plants like trees their rigidity and strength? Copyright 2012 John Wiley & Sons, Inc. 24-46 Klein, Organic Chemistry 1e 24.8 Polysaccharides • Starch is a major components of grains and other foods, like potatoes. • What is the difference between molecules of starch and molecules of cellulose? • Starch is made of amylose and amylopectin. Copyright 2012 John Wiley & Sons, Inc. 24-47 Klein, Organic Chemistry 1e 24.8 Polysaccharides • Amylopectin has some 16α-glycoside branches. • We can eat corn and potatoes, but not grass or trees. WHY? Copyright 2012 John Wiley & Sons, Inc. 24-48 Klein, Organic Chemistry 1e 24.9 Amino Sugars • Amino sugars like glucosamine are important biomolecules. • Acetylated glucosamine can form an important polysaccharide called chitin. Copyright 2012 John Wiley & Sons, Inc. 24-49 Klein, Organic Chemistry 1e 24.9 Amino Sugars • The carbonyl groups in chitin allow for even stronger Hbonding between neighboring chains. • Chitin is used in insect and arthropod exoskeletons. WHY? Copyright 2012 John Wiley & Sons, Inc. 24-50 Klein, Organic Chemistry 1e 24.10 N-Glycosides • N-glycosides can be formed when sugars are treated with an amine and an acid catalyst. • RNA and DNA incorporate important N-glycosides called nucleosides. Copyright 2012 John Wiley & Sons, Inc. 24-51 Klein, Organic Chemistry 1e 24.10 N-Glycosides • Ribose forms ribonucleosides in RNA. • Deoxyribose forms deoxyribonucleosides in DNA. Copyright 2012 John Wiley & Sons, Inc. 24-52 Klein, Organic Chemistry 1e 24.10 N-Glycosides • There are four different heterocyclic amines that attach to deoxyribose molecules to form DNA nucleosides. Copyright 2012 John Wiley & Sons, Inc. 24-53 Klein, Organic Chemistry 1e 24.10 N-Glycosides • In DNA, the nucleosides are attached to phosphate groups forming nucleotides. Copyright 2012 John Wiley & Sons, Inc. 24-54 Klein, Organic Chemistry 1e 24.10 N-Glycosides • The phosphate groups of the nucleotides are connected together to make the DNA strand or POLYNUCLEOTIDE. Copyright 2012 John Wiley & Sons, Inc. 24-55 Klein, Organic Chemistry 1e 24.10 N-Glycosides • The nucleotides in DNA can attract one another through H-bonding of the DNA base pairs. Copyright 2012 John Wiley & Sons, Inc. 24-56 Klein, Organic Chemistry 1e 24.10 N-Glycosides • WHY does DNA form a double helix? Copyright 2012 John Wiley & Sons, Inc. 24-57 Klein, Organic Chemistry 1e 24.10 N-Glycosides • RNA is structurally different from DNA : – The sugar in RNA is ribose. WHAT is the sugar in DNA? – RNA contains uracil instead of thymine. • RNA translates the information stored in DNA into working molecules (proteins and enzymes). Copyright 2012 John Wiley & Sons, Inc. 24-58 Klein, Organic Chemistry 1e 24.10 N-Glycosides • RNA strands generally do not form double helices like DNA. • RNA strands can fold into many different shapes, and some even act as catalysts called ribozymes. • It is possible that RNA evolved self-replication as an early step in the evolution of life from small molecules. Copyright 2012 John Wiley & Sons, Inc. 24-59 Klein, Organic Chemistry 1e