Survey
* Your assessment is very important for improving the workof artificial intelligence, which forms the content of this project
* Your assessment is very important for improving the workof artificial intelligence, which forms the content of this project
Feature Article MUKESH THAKUR & RUHINA JAVED Frozen Zoos! Despite Despite there there being being numerous numerous gene gene repositories repositories in in the the country, country, there there is is no no initiative initiative as as yet yet to to develop develop aa national national gene gene bank bank exclusively exclusively for for the the preservation preservation and and utilization utilization of of wild wild animal animal germplasm. germplasm. Genome Genome Resource Resource Bank Bank (GRB) (GRB) or or Frozen Frozen Zoo Zoo would would provide provide significant significant benefits benefits for for wildlife wildlife managers managers as as itit holds holds particular particular promise promise for for endangered endangered species. species. I T’S not a zoo that you would particularly enjoy visiting. Unlike the conventional zoo where antics of animals in captivity keep you entertained, in a Frozen Zoo you are more likely to come across tanks containing semen and embryos of wild animals frozen in liquid nitrogen. Sometime in the future, when an animal in the wild is threatened with extinction, it could be reproduced thanks to the gene material safely stored in the Frozen Zoo. Wildlife reproduction is a new and upcoming trend in conservation of wildlife. Practiced widely in several countries, it is not yet frequently applied in India. There are several new methods available today in wildlife reproduction including Cross-fostering, Artificial incubation, Artificial insemination, and Embryo transfer. All these methods go a long way in boosting genetic variability, increasing population size, and improving reproductive success. Cross fostering is a technique of inselective breeding, where offspring are removed from their biological parents at birth and raised by surrogates. This can also occasionally occur in nature. The surrogate can be a close relative of the species and does not have to be the same species. 44 SCIENCE REPORTER, May 2010 Artificial insemination (AI) is the process by which sperm is placed into the reproductive tract of a female for the purpose of impregnating the female by using means other than sexual intercourse. It has been practiced in the livestock industry for many years. It may be similarly practiced in wildlife management. Semen can be collected at one site and shipped anywhere in the world. Embryo Transfer (ET) is another captive breeding tool currently used. It requires two genetically related species. One species is super-ovulated, inseminated, and the fertilized eggs are collected. The fertilized eggs are implanted into surrogate mothers. The offspring carry the genetic makeup of the two original parents, not the surrogates. This science provides many opportunities to captive breeding programmes. Animals no longer have to be moved to accommodate natural mating. Conservation biologists can work to counter the effects of genetic drift. Even if an animal dies, gametes stay viable up to 24 hours, allowing the possibility to re-introduce diversity back into wild populations. Genome Resource Bank (GRB) or Frozen Zoo would provide significant benefits for wildlife managers. It has particular promise for endangered species. Feature Article There are species that desperately need help from captive situations, as we can’t save them in the wild. But captive breeding is not always easy. Many animals are disoriented by living in the wrong climate or social system, or being squeezed into small “habitats” in the presence of humans. Scientists and keepers try to help animals breed naturally. But often, researchers do not even know how normal mating takes place. Therefore, AI and IVF might be helpful in such cases. Actually, Gene Bank is not a new concept for India. These have been earlier only used for domestic animals, cultivated agriculture crops and for microbes. Some of the prominent examples are: Frozen Gene Bank The Frozen Zoo is a collection of animal genes in the form of frozen semen and embryos. In practical terms this is a collection of sperm-holding straws stored in liquid nitrogen tanks. The first so-called “frozen zoo” was created in 1975 by Kurt Benirschke, a visionary physician who switched from his human practice to work with endangered species at the San Diego Zoo, studying gene pools and genetic diseases made prevalent by inbreeding. Modern technology allows the indefinite preservation of genetic material through the freezing of semen and embryos (unfortunately, ova do not freeze very well). The implication of being able to freeze semen and embryos is that the species can be kept forever, even when they are extinct, as their genes would be preserved. When the threat to the preserved species has been controlled, implantation and development of an embryo can then be carried out. On the research front it allows much to be learned about species-specific reproductive physiology and will help to develop the technology required for related species not yet endangered. Thus when the time comes to make conservation efforts for one of these species, the technology would already be available. Today, in zoos around the world, these deep-freeze tanks act as a high-tech Ark, housing cells from the planet’s most endangered animals, including chimps, cheetahs, pandas, California condors and hundreds more. As a result, long-dead animals are now becoming parents from the grave, with their precious DNA still circulating in the gene pool. The real goal is the management of the eroding gene pools of endangered species. National Gene Bank Facility for conservation and preservation of domestic animal germplasm at the National Bureau of Animal Genetic Resources, Karnal, Haryana with the responsibility of evaluating, certifying and conserving the rich and varied germplasm resources available in the country and whose genetic base is shrinking fast. Thus, the establishment of the National Bureau of Animal Genetic Resources/National Institute of Animal Genetics in 1984 was the culmination of sustained efforts made by leading geneticists in the country over the years. National Genomic Resources Repository was established in the premises of the National Bureau of Plant Genetic Resources, New Delhi for exchange, quarantine, collection, conservation, evaluation and the systematic documentation of plant genetic resources. NBPGR act as an institutional framework for methodical and centralized efforts to collect, generate, conserve and distribute genomic resources for agricultural research. 1. A researcher at the Cincinnati Zoo removes blood from a biopsy of a domestic cat’s follicles, the egg-nurturing structures in the ovary. 2. After the blood is extracted, the eggs in the sample are easier to detect. 3. A researcher opens up one of the chilled canisters containing sperm samples and frozen embryos. 4. Samples stored in liquid nitrogen cooled to -374 degrees Fahrenheit remain viable indefinitely. They are often used successfully after two to five years in storage. left: This ocelot kitten was conceived in the lab using sperm and a stored egg SCIENCE REPORTER, May 2010 45 Feature Article The San Diego Zoo where the first frozen zoo was created (above), Animals at LaCones (above right); and Samples preserved in a Frozen Zoo (below). Microbial Type Culture Collection and Gene Bank (MTCC), a national facility, was established in 1986, funded jointly by the Department of Biotechnology (DBT) and the Council of Scientific and Industrial Research (CSIR), Government of India. The MTCC is a modern facility housed at the Institute of Microbial Technology (IMTECH), Chandigarh. The main objectives of this national facility are to act as a depository, to supply authentic microbial cultures and to provide related services to scientists working in research institutions, universities and industries. Presently, the MTCC has five sections, the Actinomycetes, Bacteria, Fungi, Yeasts and Plasmids collectively holding over nine thousand cultures. The MTCC scientists are actively involved in research programmes relating to microbial diversity, ecology and taxonomy using both classical and molecular approaches. Laboratory for the Conservation of Endangered Species (LaCONES) at CCMB, Hyderabad aims to conserve endangered animals of India by using modern techniques of DNA fingerprinting, genetic polymorphism analysis and assisted reproductive techniques such as artificial insemination, in vitro fertilization, cryo-banking of DNA, cells and tissues and eventually somatic cell cloning. Scientists at Centre for Cellular and Molecular Biology (CCMB) have been successful in the first artificial insemination of a spotted deer at the Nehru Zoological Park in Hyderabad. A group of scientists at LaCONES under the leadership of Dr. S. Shivaji, has also been working towards developing assisted reproductive technologies to successfully induce pregnancy in endangered animals by artificial insemination. Scientists were delighted with their success when the Indian Black Buck, a Schedule 1 under Wildlife (Protection) Act 1972, delivered a live fawn (later named as Blacky) on 23 August 2007. This was the first successful artificial insemination in the world in estrus-induced Black Buck, by non-surgical intra-vaginal insemination, leading to the birth of a live fawn. Scientists are also planning to take genes from live cheetah cells from Iran, where a close relative of the extinct Indian cheetah is found, and fuse it with empty leopard eggs. Any resulting embryos would then be carried in leopard surrogates. 46 SCIENCE REPORTER, May 2010 Only good quality sperm samples fulfilling all the essential parameters are banked. Frozen Zoo—Great Opportunity Genes from wild-caught endangered animals are valuable, as they are needed to increase the founder population of breeding groups. Domestic cattle are constantly being improved genetically by means of artificial breeding. The advantage of speeding up the genetic progress in a breeding programme can similarly be used for exotic species. The frozen zoo could provide the valuable material to produce genetically superior stock so that natural breeding in one herd or colony could be reproduced. Furthermore, the production of genetically healthier animals will automatically reduce inbreeding problems caused by loss of heterozygosity. There are several ways in which this type of assisted breeding can be done. Semen from a sperm bank can be used for Artificial Insemination. Other techniques include Embryo Transfer and In-Vitro Fertilisation, both of which are skillful methods that are species-specific. The success rate of assisted breeding is low compared to natural breeding, but it is very useful for animals that are anatomically or physiologically unable to breed naturally. It bypasses the hurdles of infertile animals that fail to produce oocytes or ovulate, have blocked fallopian tubes or are unable to sustain a pregnancy. Also, it allows a female Feature Article CREW’s CryoBioBank™ contains one of the world’s most valuable rhino sperm banks at Cincinnati Zoo. Frozen semen samples from the most genetically valuable Indian rhinos in North America and the only cryopreserved Sumatran rhino semen in the world are just a few examples of the important samples stored in CREW’s CryoBioBank. to donate oocytes and carry a natural pregnancy, potentially doubling her breeding rate. Creating a Frozen Zoo Males hugely overproduce sperms, which facilitates the establishment of a sperm bank. There are various methods of collecting semen including training to mount as done in horses, camels, primates and certain wild animals and manual stimulation as done in dogs. But by far the most common method in wild animals is electro ejaculation. This method uses an electrical stimulus over the accessory sex glands to elicit ejaculation. It is performed under heavy sedation or general anaesthetic. Semen can also be collected post mortem if it is retrieved soon enough. But there are several factors that play an important role. For instance, such species have a different semen composition and this changes the freezing technique and quality of postthawing. Traditional wildlife research needs to be geared to establish semen cryopreservation protocols for endangered species. During preservation, the semen quality also needs to be fully evaluated for its normal parameters. The movement of the sperm has to be assessed as to its capability to reach the ova. The viability of the sperm and acrosome integrity are also assessed using special stains. Only good quality sperm samples fulfilling all the essential parameters are banked. Washed and concentrated semen is drawn up in straws, frozen in liquid nitrogen and stored in tanks. Females produce very few oocytes each cycle, greatly limiting the use of female genetic material. However, using a specific hormone it is possible to stimulate the ovary to produce Gene Repositories in India S.No Repository TType ype Place of Establishment Collection TType ype Services 1. Blue Green Algae Collection (BGAC) IARI, New Delhi Collection of more than 700 uni-algal strains of blue-green algae and six species of Azolla Cultures supplied to different research /private organizations, BGA biofertilizer – developed and distributed to farmers and entrepreneurs 2. Marine Cyanobacterial Bharathidasan Germ Plasm Collection University, Trichy (MCGPC) Collection of 290 strains of cyanoCultures supplied to different bacteria including 70 species of marine research/private cyanobacteria belonging to 25 genera organizations of 10 families of North Andaman Island and adjoining smaller islands 3. National Facility for Pusa, New Delhi Plant Tissue Repository (NFPTCR) Holding germplasm of approx. 1000 Cultures supplied to different accessions of various including over 100 research/private organizations crops accessions of suborthodox seed species as base collection under seed cryopreservation 4. Repository for Filarial parasites and reagents Collection of 300 filarial sera belonging to different groups i.e. Microfilaraemia, Acute, Chronic and Occult clinical cases from different endemic zones of India 5. Repository for Medicinal CIMAP, Lucknow and Aromatic Plant Materials Filaria Research Group in CBT, Anna University, Chennai and CDRI, Lucknow Bulk filarial kits were provided to Institute for Vector Control and Zoonoses, Hosur, Regional Centre, Calicut, RMRC, Bhubaneshwar and ISPAT General Hospital, Rourkela. About 200 accessions of Aromatic and Documentation, identification and Medicinal Plants and a phytochemical confirmation of structure of active repositoryof around 100 pure compounds compound through spectral analysis for various medicinal and aromatic plants SCIENCE REPORTER, May 2010 47 Feature Article The animal holding area at LaCONES When an animal in the wild is threatened with extinction, it could be reproduced thanks to the gene material safely stored in the Frozen Zoo. Wildlife reproduction is a new and upcoming trend in conservation of wildlife. The implication of being able to freeze semen and embryos is that the species can be kept forever, even when they are extinct, as their genes would be preserved. more. This process, called superovulation, enables collection of 10-20 oocytes at one time. Each species does vary though in its ability to be stimulated in this way. The oocytes are then inseminated in an incubated petridish to produce embryos by IVF. Embryos are more resistant to being frozen than oocytes and will develop into normal offspring after implantation into a female. If there are too few females the embryos can be used for interspecies transfer into a related species. Currently in the Arabian Peninsula work has been carried out on several endangered species. An Arabian leopard, sandgazelle, Asian cheetah and Gordon’s wildcat sperm bank has been set up at the Breeding Centre for Endangered Arabian Wildlife (BCEAW) in Sharjah, UAE. They have been successful in cryopreservation of embryos by IVF for the Arabian leopard and Gordon’s wildcat. These will be kept frozen until suitable recipient mothers become available. This is a fast growing area of research. However, there is still a lot of work to be done on endangered species to enable a significant amount of material to be cryopreserved before it is too late. Human assisted reproduction research has developed a great deal in the last decade, with improved preservation of genetic material, improved sperm injection techniques, 48 SCIENCE REPORTER, May 2010 embryo sexing, sperm sexing and cloning. This human made reproduction has the advantage of greater funding but is, fortunately and unfortunately, curtailed by ethics. Nonetheless, such techniques are carried through and are being applied to animal breeding, though they are expensive. The number of institutions actively involved in assisted reproduction of exotic animals is still small. Modern technology allows assisted breeding in wild animals without the need to keep them in captivity, but requires close collaboration between wildlife managers and scientists. Much research is called for, so it remains imperative that zoos, wildlife centres and field stations cooperate on assisted reproduction projects to harvest opportunistic data on large-scale wild animal manipulations to facilitate the growth of developing frozen zoos. Despite there being numerous gene repositories, there is no initiative as yet to develop a national gene bank/ frozen zoo exclusively for the preservation and utilization of wild animal germplasm. Genome Resource Bank (GRB) or Frozen Zoo would provide significant benefits for wildlife managers. It has particular promise for endangered species. With the help of this technology, it is possible to bring back species from extinction. Wildlife Institute of India, an internationally acclaimed Institution in wildlife research and management, may also put emphasis on conserving wild animals, develop policy to preserve germplasm and work on creating a Frozen Zoo. Mr. Mukesh Thakur is a Senior Research Fellow at the Wildlife Institute of India, Dehradun. Address: C/o Dr. S. Sathyakumar, Scientist F & Head, Department of Endangered Species Management, Wildlife Institute of India, Post Box 18, Chandrabani, Dehradun–248001, Uttarakhand; Email: [email protected], [email protected] Ms Ruhina Javed is a Senior Research Fellow at the National Bureau of Animal Genetic Resources, Karnal, Haryana. Address: C/o Dr. Ramesh Kumar Vijh, Principal Scientist, DNA Sequencing lab, National Bureau of Animal Genetic Resources, PB 129, GT Road Bypass, Karnal-132001, Haryana; Email: [email protected]