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Genetics: Definitions & Disciplines Introduction to Molecular Genetics Genetics: the science of variation and hereditary Disciplines: ¾ What living organism are you studying? 8 Plant, bacterial, human, & medical genetics ¾ What area are you working on? 8 Molecular genetics 8 Cytogenetics 8 Biochemical genetics 8 Population genetics 8 Developmental genetics 8 Clinical genetics 8 .. Mohammad Keramatipour MD MD, PhD Keramatipour@tums ac ir [email protected] M Keramatipour 1 M Keramatipour Molecular Biology? 2 Historical Developments What is molecular biology? Pangenesis theory of inheritance: 400 B.C., by Hippocrates Homunculus (little man) theory, spermists / Ovists (17 (17th) th) Blending theory of inheritance Mendelian inheritance (particulate theory of inheritance) Era of modern genetics ¾ Science of understanding biological phenomena in molecular terms ¾ The study y of gene g structure and function at the molecular level It grew out of genetics and biochemistry ¾ Chromosome theory of inheritance ¾ Molecular genetics Wide area of overlap between molecular biology and ¾ Recombinant DNA technology molecular genetics ¾ Genomics ¾ Post Post--genomics era M Keramatipour 3 Time Line of the Field M Keramatipour M Keramatipour 4 Nobels in Medicine & Physiology 5 M Keramatipour 6 More of Nobel Laureates Nobel Laureates 2000 2000:: Arvid Carlsson, Carlsson, Paul Greengard, Greengard, Eric R Kandel Tim Hunt 2001 2001 2001:: Leland L l dHH Hartwell, t ll Ti Tim H Hunt, t Si Sir P Paull N Nurse 2002 2002:: Sydney Brenner, H Robert Horvits Horvits,, John E Sulston Sydney Brenner 2002 John Sulston 2002 Martin Evans 2007 2003 2003:: paul C Lauterbur, Lauterbur, Sir Peter Mansfield 2004 2004:: Richard Axel, Linda B Buck 2005 2005:: Barry J Marshall, Robin Warren 2006 2006:: Andrew Z Fire, Craig C Mello 2007 2007:: Mario R Capecchi Capecchi,, Sir Martin Evans, Oliver Smithies M Keramatipour 7 M Keramatipour Australia - 2003 M Keramatipour 8 Australia - 2003 9 M Keramatipour Transmission Genetics 10 Mendel’s Experiments Gregor Mendel (1822 (1822--1884 1884)) A monohybrid cross ¾ Working on pea plants 8 True True--breeding line for seven traits 8 Monohybrid y & dihybrid y crosses M Keramatipour 11 M Keramatipour 12 Interpretation of Data A Dihybrid Cross Results: Guess different possibilities: ¾ Particulate theory of ¾ Linked assortment inheritance ¾ Dominant & recessive ¾ Mendel’s law of segregation ¾ Independent assortment M Keramatipour 13 A Dihybrid Cross M Keramatipour 14 Rediscovery of Mendel’s Laws Rrsults Rrsults:: Boveri and Sutton – 1902/3 ¾ Non Non--p parental offspring: p g No ¾ The chromosome theory y of inheritance linked assortment ¾ Phenotype ratio in F2 F2 generation: 9:3:3:1 ¾ Law of independent assortment ¾ New concepts: chromosome, locus, diploid, haploid, homozygous, heterozygous Thomas Hunt Morgan – 1910 ¾ Experiments on Drosophila ¾ Concepts introduced 8 Sex Sex--linked traits, autosomes & sex chromosomes, wildwild-type, mutant 8 Genetic linkage, linkage recombination, recombination recombinant offspring offspring, genetic mapping, centimorgan M Keramatipour 15 M Keramatipour The Era of Molecular Genetics Understanding Genes ¾ Which sort of structure genes have? 8 1953 1953:: the discovery of DNA structure Understanding genes and their structure? ¾ The chromosome theory of inheritance 8 Genes on chromosomes, in nucleus Activities of genes ¾ Chemical nature of DNA, RNA 8 1869 1869:: Friedrich Miescher discovered ‘‘nuclein nuclein’’ 8 End of nineteenth century: chemical nature of DNA ¾ Relationship between genes and proteins ¾ Gene expression ¾ Gene mutations ¾ Ge Gene e ccloning o g ¾ What is the composition of genes? 8 Protein, DNA, or RNA? 8 1944 1944:: Oswald Avery & colleagues showed that genes composed of DNA M Keramatipour 16 17 M Keramatipour 18 Nucleic Acids Nucleic Acids - Nucleic Acids: A group of macromolecules that: a. have acidic properties b located b. l t d iin th the nucleus l c. are polymers of nucleotides - Nitrogenous bases: There are two groups of nitrogenous bases: a Purine: A & G a. b. Pyrimidine: T, C, & U - Required for the storage and expression of genetic information - Sugar: - Deoxyribose in DNA - Ribose in RNA - There are two classes of nucleic acid: a. Deoxyribonucleic acid (DNA) b. Ribonucleic acid (RNA) - Sugar and phosphate make the backbone of DNA and nitrogenous bases carry the genetic information - Nucleotide: A nucleotide consists of three parts: a. A nitrogenous base b. A sugar c. One or more phosphate group M Keramatipour 19 The Components of Nucleotides M Keramatipour M Keramatipour 20 The Structure of Nucleotides 21 M Keramatipour 22 DNA & RNA Strands Nucleoside vs Nucleotides - Nucleoside: a sugar with an attached base - Nucleotide: a nucleoside with a phosphate group attached at carbon atom 5’ or 3’ M Keramatipour 23 M Keramatipour 24 Knowing DNA Identifying Transformation Principle Does DNA carry The Genetic information? G Griffith’s t s eexperiments pe e ts showed that some genetic material from the dead bacteria was being transferred to the living bacteria and providing them with a new trait. However, oweve , Griffith did not know what the transformation substance was. M Keramatipour 25 M Keramatipour Identifying Transformation Principle 26 Experiment on T2 bacteriophage These results indicated that contaminating RNA and proteins in the extract was not acting as the genetic material. However, when the extract was treated with DNase, its ability to convert type IIR into type IIIS was lost. These results indicated that the degradation of the DNA in the extract by DNase prevented conversion of type IIR to type IIIS. This interpretation is consistent with the hypothesis that DNA is the genetic material. In other word the transformation principle is DNA. Life cycle of T2 bacteriophage M Keramatipour 27 M Keramatipour 28 Experiment on T2 bacteriophage By Hershey and Chase (1952) Interpretation: 1. Most of the phase DNA was found in the bacteria. 2. Most of the phase proteins was found in the supernatant. So: M Keramatipour 29 DNA is the genetic material. M Keramatipour 30 Discovery of DNA Structure Discovery of DNA Structure Background data available to Watson and Crick: 1. Discovery of double helical structure of protein by Linus Pauling 2. X-ray diffraction data about DNA structure by Rosalind Franklin 3. Analysis of base composition of DNA by Erwin Shargaff (A/T, G/C rule)) James Watson M Keramatipour Francis Crick 31 M Keramatipour 32 Double Helical Structure of DNA M Keramatipour 33 Double Helical Structure of DNA M Keramatipour 34 Complementary nature of double helix Complementary nature of double helix is basis for DNA hybridization M Keramatipour 35 M Keramatipour 36 Unusual Structures of DNA M Keramatipour Thank You For Your Attention!!! 37 M Keramatipour 38