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7.1 Isolating the Material of Heredity E X P E C TAT I O N S Explain the roles of evidence, theories, and paradigms in the development of scientific knowledge about genetics. Demonstrate an understanding of the process of discovery that led to the identification of DNA as the material of heredity. Interpret the findings of key experiments that contributed to this process. In 1865, the Austrian monk Gregor Mendel presented the results of his research on patterns of inheritance in garden peas to the Natural Science Society in Brunn, Austria. He proposed a number of hypotheses that challenged much of the thinking of his day about heredity. He argued, for example, that the maternal and paternal gametes contributed equally to the development of the offspring. He also held that the information contributed by each parent was not blended but rather passed on to the offspring as discrete bits of information or “factors of inheritance.” He went on to state that, while two factors will exist for any one visible trait, one of them (known as the recessive factor) might not be expressed. Mendel’s findings on the transmission of hereditary information were not widely recognized at the time. This was partly due to the strong divisions that existed among scientific disciplines then, which meant that the work of a botanist was not likely to be noticed by zoologists or by medical doctors. The apparently fixed nature of Mendelian factors of inheritance also seemed to be at odds with the newly emerging theory of evolution. Over the next few decades, however, scientists began to recognize the many similarities among cellular processes in bacterial, plant, animal, and human cells (including the processes you studied in Unit 1). They also found that Mendel’s principles were consistent with the idea that species change and evolve over time. Today, Mendel’s work is recognized as the foundation of modern genetics. Only four years after Mendel’s presentation in Brunn, and less than 300 km away, the young Swiss physician and scientist Friedrich Miescher isolated a substance he called “nuclein” from the nuclei of white blood cells. Miescher, shown in Figure 7.1, determined that nuclein was made up of an acidic portion (which he termed “nucleic acid”) and an alkaline portion (which was later shown to be protein). Shortly thereafter Miescher 218 MHR • Unit 3 Molecular Genetics turned to the study of chemical properties of other cellular structures. Almost a century passed before scientists established the connection between the nucleic acid isolated by Miescher and Mendel’s factors of inheritance. Figure 7.1 Friedrich Miescher was 25 years old when he isolated nucleic acids from the nuclei of white blood cells in 1869. He was working in a hospital treating wounded soldiers, and he was able to collect white blood cells from their bandages. The Components of Nucleic Acids Following the work of Miescher, Phoebus Levene studied nucleic acid in more detail. During a career that stretched from the early 1900s to the 1930s, Levene isolated two types of nucleic acids that could be distinguished by the different sugars involved in their composition. One acid contained the five-carbon sugar ribose, so Levene called it “ribose nucleic acid” (ribonucleic acid or RNA). The other acid contained a previously unknown five-carbon sugar molecule. Since this sugar was similar in structure to ribose but lacked one oxygen molecule, Levene called it deoxyribose. He went on to call the nucleic acid containing this sugar “deoxyribose nucleic acid” (deoxyribonucleic acid or DNA). Figure 7.2 shows the structures of ribose and deoxyribose sugars. Levene is pictured in Figure 7.3. RNA 5′ HO CH2 4′ DNA O H 3′ H 2′ OH 5′ HO CH2 1′ 4′ H ribose H 3′ OH OH A O OH H 2′ 1′ of a five-carbon sugar, a phosphate group, and one of four nitrogen-containing (nitrogenous) bases. The bases found in DNA nucleotides are adenine (A), guanine (G), cytosine (C), and thymine (T). In RNA, the base uracil (U) is found instead of thymine. The only difference between the nucleotides in each nucleic acid is in their bases. As a result, scientists studying nucleic acids soon began to identify the nucleotides simply by their bases or, more commonly, by their initials: A, G, C, T, and U. H phosphate P OH H B C 5′ O deoxyribose S 4′ Figure 7.2 The structure of (A) ribose, found in RNA, and 2′ 3′ pentose sugar (B) deoxyribose, found in DNA. In ribose, the 2′ carbon is bonded to a hydroxyl group. In deoxyribose, this carbon is bonded to a single hydrogen molecule. Figure 7.3 Phoebus Levene made some important discoveries about the properties of nucleic acids. After distinguishing between DNA and RNA, Levene went on to show that nucleic acids are made up of long chains of individual units he termed nucleotides. Both DNA and RNA contain a combination of four different nucleotides. As shown in Figure 7.4, each nucleotide is composed O O H During the period when Levene was conducting his studies on nucleic acids, other experimenters demonstrated that Mendel’s factors of inheritance were associated with the nuclein substance first isolated by Miescher. By that time, nuclein had been shown to be made up of individual structures known as chromosomes, strand-like complexes of nucleic acids and protein tightly bound together. Thus, the finding that the factors of inheritance were associated with nuclein drew increased attention to both the protein component and the properties of nucleic acids. nitrogencontaining base 1′ H O CH3 H N N N H uracil H O N H H thymine Figure 7.4 The general structure of a nucleotide. In DNA, the sugar is deoxyribose, and the nitrogenous base is one of the following: adenine (A), guanine (G), cytosine (C), or thymine (T). In RNA, the sugar is ribose and the nitrogenous base uracil (U) appears instead of thymine. While A, G, C, T, and U are the major bases found in nucleic acids, there are also some minor ones. These are usually slightly altered forms of the major bases. In many cases the minor bases serve as specific signals involved in programming or protecting genetic information. At this point, the results of Levene’s work led him to conclude incorrectly that nucleic acids contained equal amounts of each of these nucleotides. Based on this finding, he suggested that DNA and RNA were made up of long chains in which the nucleotides appeared over and over again in the same order; for example, ACTGACTG ACTG and so on. This, in turn, caused most scientists to conclude that DNA could not be the material of heredity because it was not complex enough to account for the tremendous variation in inherited traits. It was generally accepted that DNA could be a structural component of hereditary material, but scientists thought the primary instructions for inherited traits must lie in the proteins that are also found in chromosomes. Chapter 7 Nucleic Acids: The Molecular Basis of Life • MHR 219 Several decades passed before Levene’s conclusion was finally corrected. Mounting Evidence for the Role of DNA in Heredity One important piece of evidence that DNA was, in fact, the material of heredity came in 1944, when the team of Oswald Avery, Colin MacLeod, and Maclyn McCarty published the results of their experiments with bacteria. These experiments, which built on the 1928 work of British researcher Fred Griffith, were conducted over a period of nearly 15 years. As illustrated in Figure 7.5, Griffith showed that when a heat-killed, pathogenic (diseasecausing) strain of the bacterium Streptococcus pneumoniae was added to a suspension containing a non-pathogenic strain, the non-pathogenic strain was somehow transformed to become pathogenic. Avery and his colleagues undertook several important steps to isolate the agent behind this transformation, which Griffith had called the transforming principle. When they treated a suspension of the pathogenic bacteria with a protein-destroying enzyme, they noticed that the transformation of non-pathogenic bacteria into a pathogenic strain still took place. When the pathogenic bacteria were treated with a DNAdestroying enzyme, however, the transformation did not take place. Finally, when the bacteria were treated with an enzyme that destroyed RNA but not DNA, the transformation occurred again. This demonstrated that the substance responsible for the transformation of the non-pathogenic bacteria into a pathogenic strain was DNA. Although the work of Avery, MacLeod, and McCarty provided strong evidence for the role of DNA in determining cell function, the results were mice live heat-killed pathogenic strain of S. pneumoniae A When a heat-killed, pathogenic strain of Streptococcus pneumoniae is injected into mice, the mice live. mice die mixture of heat-killed pathogenic and live + nonpathogenic strain of S. pneumoniae mice die live pathogenic strain of S. pneumoniae B When live, pathogenic S. pneumoniae bacteria are injected into mice, the mice die. mice live live nonpathogenic strain of S. pneumoniae C When a live, non-pathogenic mutant strain of the same S. pneumoniae bacteria is injected into mice, the mice live. Figure 7.5 Griffith’s discovery of the “transforming principle” in 1928 was accidental. He employed heat-killed, pathogenic bacteria as a control in an experiment on infection, but did not treat the cells at a high enough temperature to denature their DNA. In so doing, he discovered that the dead cells’ pathogenic properties 220 D When heat-killed, pathogenic bacteria are added to a suspension containing the live, non-pathogenic strain of bacteria, transformation occurs and the colony of non-pathogenic bacteria become pathogenic. When these bacteria are injected into mice, the mice die. MHR • Unit 3 Molecular Genetics could be passed on to living bacterial cells. Griffith died of injuries suffered in an air raid during World War II before he could discover what caused this transformation. In 1944, Avery and his team were the first to demonstrate that the transforming principle was DNA. not widely accepted. Many scientists who had accepted Levene’s theory of the structure of nucleic acids simply refused to believe that the apparently simple, repetitive DNA molecule could play a key role in heredity. Others maintained that while DNA might be an agent of heredity in bacteria, prokaryotes were not a reliable model for genetic mechanisms in more complex organisms. It was not until many years later that scientists determined that the encoding of genetic information works in very similar ways in all living cells. During the same years that Avery and his team were trying to pin down the identity of the transforming principle, other experimental evidence for the role of DNA in heredity began to accumulate. One key discovery was that in any given species, the quantity of DNA in somatic cells is both constant and double the quantity of DNA in gametes. Since at each mating two gametes come together to produce a zygote with a full complement of hereditary material, you would expect reproductive cells to have only half as much hereditary material as the cells of the body. However, it was found that the amount of protein varies widely from the cells of one tissue to another, and is not necessarily any lower in reproductive cells. In the late 1940s, Erwin Chargaff, shown in Figure 7.6, revisited the results of Levene’s experiments on the nucleotide composition of DNA. A more careful study, made possible in part by more advanced equipment, led Chargaff to overturn one of Levene’s main conclusions. Chargaff argued that the four nucleotides were not present in equal quantities, but rather were found in varying but characteristic proportions. Chargaff demonstrated that although the nucleotide composition of DNA varies from one species to another, DNA specimens taken from different animals of the same species (or from different tissues collected from one animal) have the same nucleotide composition. He also found that this base composition remains consistent despite changes in the age of the specimen, its physical state (including nutrition and health), or its environment. Perhaps the most significant of Chargaff’s findings was his discovery that, in any sample of DNA, the amount of adenine present is always equal to the amount of thymine, and the amount of cytosine is always equal to the amount of guanine. This constant relationship is known as Chargaff’s rule. Figure 7.6 Erwin Chargaff clearly refuted the theory that DNA was made up of a single sequence of nucleotides repeated over and over again. The possibility that DNA had a more complex structure helped scientists accept that DNA could play a role in heredity and development. Further, and largely conclusive, evidence that DNA and not protein is the genetic material emerged in 1952. In an experiment, Alfred Hershey and Martha Chase used radioactive labelling techniques to follow the process of a virus known as T2 infecting a bacterial host. The T2 virus, which infects the bacteria Escherichia coli, is made up of a protein coat housing a strand of DNA. As shown in Figure 7.7, when the virus infects a bacterium, it first attaches to the wall of the bacterium and Figure 7.7 Looking somewhat like space capsules, these T2 phages use leg-like structures to bind to the cell wall of a bacterium. Chapter 7 Nucleic Acids: The Molecular Basis of Life • MHR 221 then uses a tail-like projection to inject its genetic material into the bacterial cell. The genetic material reprograms the cell, causing it to produce new viruses. These new viruses accumulate within the bacterial cell until the cell ruptures and releases the viruses to infect nearby cells. WEB LINK www.mcgrawhill.ca/links/biology12 Griffith’s discovery of the transforming principle led some researchers to propose that transformation could occur in eukaryotes as well. What effect would this viewpoint have on theories about inheritance and development? Use the Internet to research the history of scientific thought from 1900 to 1950. What other world events might have influenced how scientific theories were applied during these years? Go to the web site above, and click on Web Links. Write down some ideas to discuss with your class. Sample 1 Figure 7.8 illustrates the Hershey-Chase experiment. The scientists knew that virtually all of the phosphorus present in the T2 virus was in its DNA, while sulfur was found only in its protein coat. Consequently, they prepared two different samples of the T2 virus, one tagged with radioactive phosphorus and the other tagged with radioactive sulfur. Each sample was then added to a separate suspension of non-radioactive E. coli. After a period of growth, the two resulting mixtures were individually agitated in a blender to shake off the part of the virus that remained attached to the exterior cell wall of the bacterium after the cell was infected. Finally, the infected bacteria were separated from each mixture, leaving the viral protein coats in suspension. The results were then analyzed. In both cases, the bacteria became infected by the phage. In the first sample, in which the viral DNA was radioactive, the infected bacteria were Sample 2 radioactive phosphorus in DNA non-radioactive DNA non-radioactive protein coat radioactive sulphur in protein coat A Two batches of phages are cultured. One has radioactively tagged DNA, while the other has a radioactively tagged protein coat. A sample of each type of virus is added to a separate suspension of non-radioactive E. coli. B The viruses inject their DNA into the bacteria. “ghosts” sheared off by blender C Each suspension is shaken in a blender to separate the virus heads or “ghosts” from the outside of the cell walls of the infected bacteria. “ghosts” and bacteria separated by centrifuge radioactive non-radioactive non-radioactive radioactive D The bacterial cells infected by the virus with radioactive DNA are found to be radioactive, indicating that the viral DNA entered the host cell. In contrast, the bacterial cells infected by the virus with radioactive protein are found to be non-radioactive, indicating that no viral protein entered the host cell. Figure 7.8 The experiments conducted by Hershey and Chase demonstrated that when a virus infects a bacterium, only the DNA of the virus enters the host cell. 222 MHR • Unit 3 Molecular Genetics found to be radioactive while the fluid containing the separated viral protein coats was not. In the second sample, in which only the virus protein coat was labelled, the reverse occurred — the fluid containing the protein coats was radioactive while the infected bacteria were not. Hershey and Chase concluded that only the DNA from the virus entered the bacterial cell; the protein coat remained outside the cell wall. Therefore, the transmission of genetic information from the virus to the metabolic machinery of the bacterium could only take place as a result of the injection of DNA into the bacterium. Through the 1940s and into the early 1950s, convincing evidence mounted to support the SECTION REVIEW 1. K/U What is the relationship between nuclein and a chromosome? 2. K/U Identify the five different nucleotides. Which one is only found in RNA? 3. C Draw the general structure of a DNA nucleotide and label each of its components. 4. MC Mendel’s findings involved plants, which is perhaps why biologists whose investigations lay in different fields largely ignored them for some four decades after Mendel presented his findings. With a partner or in a small group, discuss other factors that might have contributed to the relative obscurity of Mendel’s discoveries during this period. If you had had the opportunity to work with Mendel, what advice would you have given him to help ensure that his discoveries received more timely recognition? 5. central role of Miescher’s nucleic acids — and specifically DNA — in the mechanisms of heredity. Scientists from a variety of fields began to devote more and more attention to the problem of determining the structure of DNA. The race that ensued crossed the boundaries of scientific disciplines and became swept up in politics, social values, and debates on ethics, as individuals and teams from different nations competed with one another. The race finally ended in 1953 with the publication of a landmark paper describing the molecular structure of DNA. You will study this structure in more detail in the next section. Define Chargaff’s rule and explain its significance. 8. I You are given an enzyme that replaces the 2′ hydroxyl group of a sugar molecule with a methyl (−CH3) group. The enzyme has no other effect. If you treat a suspension of heat-killed, pathogenic bacteria with this enzyme and then add a culture of live, non-pathogenic bacteria, will transformation occur? Explain your reasoning. 9. Several researchers besides Mendel made outstanding contributions that eventually helped to pinpoint DNA as the molecule of heredity. Develop a flowchart that summarizes the work of the following scientists and shows how their discoveries contributed to the discoveries that followed. (a) Miescher (b) Levene (c) Griffith (d) Avery, MacLeod, and McCarty K/U 6. K/U Explain why researchers believed for many years that DNA was too simple a molecule to serve as the material of heredity. Whose research conclusion lent support to this belief? 7. Hershey and Chase used radioactive isotopes of phosphorous and sulfur in their experiments to isolate the factor responsible for the transmission of genetic information. Design an experiment that would show the results they could have expected if they had used radioactive carbon and nitrogen, respectively, in the place of the radioactive phosphorus and sulfur. Use diagrams to illustrate the results of tests on both the virus ghosts and the infected bacterial cells. I C 10. MC You have learned about several milestones in the development of the science of genetics. In your opinion, what technologies or cultural issues might have influenced the timing of these milestones and other discoveries in genetics? 11. Historians debate the degree to which key people actually change the course of history. Do you think the individual scientists discussed in this section influenced the actual progress of knowledge? Why or why not? MC Chapter 7 Nucleic Acids: The Molecular Basis of Life • MHR 223