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Different Ways to Make a Living
Start
Yes
Photoautotroph
Chemoautotroph
Yes
Yes
Fixes carbon?
No
Energy
Energy
from light?
from light?
No
No
Energy
Energy
from inorganic
from inorganic
oxidation?
oxidation?
No
No
Other autotroph
Other heterotroph
Yes
Yes
Photoheterotroph
Chemoheterotroph
Hydrothermal Venting at the Seafloor
Methane Seeps
Amino Acids and Proteins
Enzyme Catalysis
Substrate
Enzyme changes shape
slightly as substrate binds
Products
Active site
Substrate entering
active site of enzyme
Enzyme/substrate
complex
Enzyme/products
complex
Products leaving
active site of enzyme
Michaelis-Menten Kinetics
[S]
(of Substrate)
Concentration
[P]
[E]
[ES]
Time
How to get the ‘Redfield’ organic matter?
Glucose
Complex Carbohydrates
How to get the ‘Redfield organic matter’ more reduced
Common Lipids
A Bi-lipid Membrane
Carotenoids used in light
harvesting
Blankenship et al., 2011
Chloroplasts are where the action is
A Diatom, #s are ~10µm apart
The 2 Parts to Photosynthesis, Light and Dark
Light reactions at the
inner chloroplast
membrane
Dark reactions actually fix
the CO2 with RuBisCo
Cocolithophores
-Plant
-CaCO3 shell
May 18, 1998
Diatoms
-Plant
-Silica shell
Radiolaria
-Zooplankton (heterotroph)
-Silica shell
Foraminifera
-Zooplankton (heterotroph)
-But, symbiotic algae sometimes
-CaCO3 shell
Climate Since the Dinosaurs
Age (Millions of Years)
after Zachos et al, 2001
A “Stack” of multiple (57) records
2
2.5
Benthic δ18O
3
3.5
4
4.5
5
5.5
0
500
1000
1500
2000
2500
Age (ka)
3000
3500
4000
4500
5000
Lisiecki and Raymo, 2006
Picoplankton
-very small algae
Chlorophyll b
-blue light adapted
-found in Prochlorococcus
Zooplankton
Copepods
Krill
Jelly Fish
Sverdrup, 1952
Sverdrup, 1952
The North Atlantic Bloom in the Satellite Era
(SeaWifs Chl-a retrievals from 2003)
February
May
see Siegel et al., 2002 for a discussion
A ‘Hovmoller Plot’ of the NA Bloom
Aug 1
June 1
May 1
April 1
Feb 1
Alldredge and Silver, 1988
Flux=F100(z/100)-0.858
F100=1.53 mol/m2/yr
PP=22.2 g/m2/yr
Martin et al. (1987)
Time series of New/Total at Bermuda
NH3
NO3
Dugdale and Goering, 1967
Latitude dependence in North Atlantic
Time series at Bermuda
Dugdale and Goering, 1967
Open Ocean
Coastal
Flux=F100(z/100)-0.858
F100=1.53 mol/m2/yr
PP=22.2 g/m2/yr
Martin et al. (1987)
A post JGOFS view of the upper ocean
Different size classes
associated with New
and 1° Prod
surface
(also NH4+
& org. N)
Nitrification
1c
FOOD WEB
1b
2b
N2
New Production (f)
is now NO3 and N2
fixation
NO3–
3
P
Z
1% light level
NH4+
B
2a
4
New Production
5a
1a
Regenerated
Production
PON
6a
5b
DON
Export
Production
Role of Bacteria is
important in
remineralization (and
1° prod?)
6b
Export Production
(e) is now both
sinking of POM and
mixing of DOM
Carlson et al. (1994)