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Publications for Allan Jones Publications for Allan Jones 2013 Parr, W., Chamoli, U., Jones, A., Walsh, W., Wroe, S. (2013). Finite element micro-modelling of a human ankle bone reveals the importance of the trabecular network to mechanical performance: New methods for the generation and comparison of 3D models. Journal of Biomechanics, 46(1), 200-205. <a href="http://dx.doi.org/10.1016/j.jbiomech.2012. 11.011">[More Information]</a> Wong, C., Curthoys, I., O'Leary, S., Jones, A. (2013). Heavy metal staining, a comparative assessment of gadolinium chloride and osmium tetroxide for inner ear labyrinthine contrast enhancement using X-ray microtomography. Acta Oto-Laryngologica, 133(1), 22-27. <a href="http://dx.doi.org/10.3109/00016489.2012. 715751">[More Information]</a> 2012 Mukherjee, P., Uzun-Coruhlu, H., Wong, C., Curthoys, I., Jones, A., Gibson, W. (2012). Assessment of intracochlear trauma caused by the insertion of a new straight research array. Cochlear Implants International, 13(3), 156-162. <a href="http://dx.doi.org/10.1179/1754762811Y.0 000000013">[More Information]</a> Silthampitag, P., Klineberg, I., Austin, B., Jones, A. (2012). Bone microarchitecture at oral implant sites in ectodermal dysplasia (ED): a comparison between males and females. Clinical Oral Implants Research, 23(11), 1275-1282. <a href="http://dx.doi.org/10.1111/j.1600-0501.201 1.02303.x">[More Information]</a> Geraghty, P., Jones, A., Stewart, J., Macbeth, W. (2012). Micro-computed tomography: an alternative method for shark ageing. Journal of Fish Biology, 80, 1292-1299. <a href="http://dx.doi.org/10.1111/j.1095-8649.201 1.03188.x">[More Information]</a> Montenegro, V., Jones, A., Petocz, P., Gonzales, B., Darendeliler, M. (2012). Physical properties of root cementum: Part 22. Root resorption after the application of light and heavy extrusive orthodontic forces: A microcomputed tomography study. American Journal of Orthodontics and Dentofacial Orthopedics, 141(1), e1-e9. <a href="http://dx.doi.org/10.1016/j.ajodo.2011.06. 032">[More Information]</a> Aras, B., Cheng, L., Turk, T., Elekdag-Turk, S., Jones, A., Darendeliler, M. (2012). Physical properties of root cementum: Part 23. Effects of 2 or 3 weekly reactivated continuous or intermittent orthodontic forces on root resorption and tooth movement: A microcomputed tomography study. American Journal of Orthodontics and Dentofacial Orthopedics, 141(2), e29-e37. <a href="http://dx.doi.org/10.1016/j.ajodo.2011.07. 018">[More Information]</a> 2011 Tsafnat, N., Maddock (nee Amanat), N., Jones, A. (2011). Analysis of coke under compressive loading: A combined approach using micro-computed tomography, finite element analysis, and empirical models of porous structures. Fuel, 90(1), 384-388. <a href="http://dx.doi.org/10.1016/j.fuel.2010.08.02 6">[More Information]</a> Meier, A., Farrow, C., Harris, B., King, G., Jones, A. (2011). Application of texture analysis to ventilation SPECT/CT data. Computerized Medical Imaging and Graphics, 35(6), 438-450. <a href="http://dx.doi.org/10.1016/j.compmedimag. 2011.01.001">[More Information]</a> Paetyangkul, A., Turk, T., Elekdag-Turk, S., Jones, A., Petocz, P., Cheng, L., Darendeliler, M. (2011). Physical properties of root cementum: Part 16. Comparisons of root resorption and resorption craters after the application of light and heavy continuous and controlled orthodontic forces for 4, 8 and 12 weeks. American Journal of Orthodontics and Dentofacial Orthopedics, 139(3), e279-e284. <a href="http://dx.doi.org/10.1016/j.ajodo.2010.07. 021">[More Information]</a> Bartley, N., Turk, T., Colak, C., Elekdag-Turk, S., Jones, A., Petocz, P., Darendeliler, M. (2011). Physical properties of root cementum: Part 17. Root resorption after the application of 2.5° and 15° of buccal root torque for 4 weeks: A microcomputed tomography study. American Journal of Orthodontics and Dentofacial Orthopedics, 139(4), e353-e360. <a href="http://dx.doi.org/10.1016/j.ajodo.2010.01. 033">[More Information]</a> Wu, A., Turk, T., Colak, C., Elekdag-Turk, S., Jones, A., Petocz, P., Darendeliler, M. (2011). Physical properties of root cementum: Part 18. The extent of root resorption after the application of light and heavy controlled rotational orthodontic forces for 4 weeks: A microcomputed tomography study. American Journal of Orthodontics and Dentofacial Orthopedics, 139(5), e495-e503. <a href="http://dx.doi.org/10.1016/j.ajodo.2010.01. 036">[More Information]</a> Ho, C., Turk, T., Elekdag-Turk, S., Jones, A., Petocz, P., Cheng, L., Darendeliler, M. (2011). Physical properties of root cementum: Part 19. Comparison of the amounts of root resorption Publications for Allan Jones between the right and left first premolars after application of buccally directed heavy orthodontic tipping forces. American Journal of Orthodontics and Dentofacial Orthopedics, 140, e49-e52. <a href="http://dx.doi.org/10.1016/j.ajodo.2010.02. 034">[More Information]</a> King, A., Turk, T., Colak, C., Elekdag-Turk, S., Jones, A., Petocz, P., Darendeliler, M. (2011). Physical properties of root cementum: Part 21. Extent of root resorption after the application of 2.5 and 15 tips for 4 weeks: A microcomputed tomography study. American Journal of Orthodontics and Dentofacial Orthopedics, 140(6), e299-e305. <a href="http://dx.doi.org/10.1016/j.ajodo.2011.06. 023">[More Information]</a> Ellis, S., Grassinger, J., Jones, A., Borg, J., Camenisch, T., Haylock, D., Bertoncello, I., Nilsson, S. (2011). The relationship between bone, hemopoietic stem cells, and vasculature. Blood, 118(6), 1516-1524. <a href="http://dx.doi.org/10.1182/blood-2010-08-3 03800">[More Information]</a> Manconi, F., Kable, E., Dwarte, D., Jones, A., Russell, P., Chullapram, T., Gange, P., Obeysekara, S., Thomas, G., Fraser, I. (2011). Three dimensional microvascular measurements in human endometrium using optical slices from laser scanning confocal microscopy (LSCM). Micron, 42(8), 853-862. <a href="http://dx.doi.org/10.1016/j.micron.2011.06 .001">[More Information]</a> Silthampitag, P., Klineberg, I., Jones, A., Austin, B., Zee, K., Wallace, C., Scholz, S., Naim, A., Zoud, K. (2011). Ultramicroscopy of Bone at Oral Implant Sites: A Comparison of ED and Control Patients. Part 1 - Defining the Protocol. International Journal of Prosthodontics, 24(2), 147-154. <a href="http://www.ncbi.nlm.nih.gov/entrez/query. fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract &list_uids=21479283">[More Information]</a> 2010 Wang, Y., Wertheim, D., Jones, A., Chang, H., Coombes, A. (2010). Micro-CT Analysis of Matrix-Type Drug Delivery Devices and Correlation With Protein Release Behaviour. Journal of Pharmaceutical Sciences, 99(6), 2854-2862. <a href="http://dx.doi.org/10.1002/jps.22027">[Mor e Information]</a> Wang, Y., Wertheim, D., Jones, A., Coombes, A. (2010). Micro-CT in drug delivery. European Journal of Pharmaceutics and Biopharmaceutics, 74(1), 41-49. <a href="http://dx.doi.org/10.1016/j.ejpb.2009.05.0 08">[More Information]</a> Wang, Y., Wertheim, D., Jones, A., Coombes, A. (2010). Micro-CT in drug delivery. European Journal of Pharmaceutics and Biopharmaceutics, 74(1), 41-49. <a href="http://dx.doi.org/10.1016/j.ejpb.2009.05.0 08">[More Information]</a> Cheng, L., Turk, T., Elekdag-Turk, S., Jones, A., Yu, Y., Darendeliler, M. (2010). Repair of root resorption 4 and 8 weeks after application of continuous light and heavy forces on premolars for 4 weeks: A histology study. American Journal of Orthodontics and Dentofacial Orthopedics, 138(6), 727-734. <a href="http://dx.doi.org/10.1016/j.ajodo.2009.01. 029">[More Information]</a> Soriano, C., Archer, M., Azar, D., Creaser, P., Delclos, X., Godthelp, H., Hand, S., Jones, A., Nel, A., Néraudeau, D., et al (2010). Synchrotron X-ray imaging of inclusions in amber. Academie des Sciences. Comptes Rendus. Palevol, 9, 361-368. <a href="http://dx.doi.org/10.1016/j.crpv.2010.07.0 14">[More Information]</a> 2009 Tsafnat, N., Tsafnat, G., Jones, A. (2009). Automated mineralogy using finite element analysis and X-ray microtomography. Minerals Engineering, 22(2), 149-155. <a href="http://dx.doi.org/10.1016/j.mineng.2008.0 6.003">[More Information]</a> Zou, W., Gao, J., Jones, A., Hunter, N., Swain, M. (2009). Characterization of a novel calibration method for mineral density determination of dentine by x-ray micro-tomography. The Analyst, 134(1), 72-79. <a href="http://dx.doi.org/10.1039/b806884d">[Mo re Information]</a> Sriram, D., Jones, A., Alatli Burt, I., Darendeliler, M. (2009). Effects of Mechanical Stimuli on Adaptive Remodeling of Condylar Cartilage. Journal of Dental Research, 88(5), 466-470. <a href="http://dx.doi.org/10.1177/0022034509336 616">[More Information]</a> Maddock (nee Amanat), N., Tsafnat, N., Loo, B., Jones, A. (2009). Metallurgical coke: An investigation into compression properties and microstructure using X-ray microtomography. Scripta Materialia, 60(2), 92-95. <a href="http://dx.doi.org/10.1016/j.scriptamat.2008 .09.003">[More Information]</a> Ballard, D., Jones, A., Petocz, P., Darendeliler, M. (2009). Physical properties of root cementum: Part 11. Continuous vs intermittent controlled orthodontic forces on root resporption. A microcompound-tomography study. American Publications for Allan Jones Journal of Orthodontics and Dentofacial Orthopedics, 136(1), 8.e1-8.e8. <a href="http://dx.doi.org/10.1016/j.ajodo.2007.07. 026">[More Information]</a> Deane, S., Jones, A., Petocz, P., Darendeliler, M. (2009). Physical properties of root cementum: Part 12. The incidence of physiologic root resorption on unerupted third molars and its comparison with orthodontically treated premolars: A microcomputed-tomography study. American Journal of Orthodontics and Dentofacial Orthopedics, 136, 148.e1-148.e9. <a href="http://dx.doi.org/10.1016/j.ajodo.2009.03. 010">[More Information]</a> Cheng, L., Turk, T., Elekdag-Turk, S., Jones, A., Petocz, P., Darendeliler, M. (2009). Physical properties of root cementum: Part 13. Repair of root resorption 4 and 8 weeks after the application of continuous light and heavy forces for 4 weeks: A microcomputed-tomography study. American Journal of Orthodontics and Dentofacial Orthopedics, 136, 320.e1-320.e10. <a href="http://dx.doi.org/10.1016/j.ajodo.2008.05. 014">[More Information]</a> Paetyangkul, A., Turk, T., Elekdag-Turk, S., Jones, A., Petocz, P., Darendeliler, M. (2009). Physical properties of root cementum: Part 14. The amount of root resorption after force application for 12 weeks on maxillary and mandibular premolars: A microcomputed-tomography study. American Journal of Orthodontics and Dentofacial Orthopedics, 136, 492.e1-492.e9. <a href="http://dx.doi.org/10.1016/j.ajodo.2009.03. 008">[More Information]</a> href="http://dx.doi.org/10.1007/s10439-007-942 4-5">[More Information]</a> Omar, H., Shen, G., Jones, A., Zoellner, H., Petocz, P., Darendeliler, M. (2008). Effect of Low Magnitude and High Frequency Mechanical Stimuli on Defects Healing in Cranial Bones. Journal of Oral and Maxillofacial Surgery, 66, 1104-1111. <a href="http://dx.doi.org/10.1016/j.joms.2008.01.0 48">[More Information]</a> Tsafnat, N., Tsafnat, G., Jones, A. (2008). Micro-finite element modelling of coke blends using X-ray microtomography. Fuel, 87, 2983-2987. <a href="http://dx.doi.org/10.1016/j.fuel.2008.03.02 7">[More Information]</a> Young, P., Nguyen, K., Jones, A., Traini, D. (2008). Microstructural Analysis of Porous Composite Materials: Dynamic Imaging of Drug Dissolution and Diffusion Through Porous Matrices. The AAPS Journal, 10(4), 560-564. <a href="http://dx.doi.org/10.1208/s12248-008-906 3-2">[More Information]</a> Barbagallo, L., Jones, A., Petocz, P., Darendeliler, M. (2008). Physical properties of root cementum: Part 10. Comparison of the effects of invisible removable thermoplastic appliances with light and heavy orthodontic forces on premolar cementum. A microcomputed-tomography study. American Journal of Orthodontics and Dentofacial Orthopedics, 133(2), 218-227. <a href="http://dx.doi.org/10.1016/j.ajodo.2006.01. 043">[More Information]</a> Maddocks, A., Cassidy, D., Jones, A., Harris, A. (2009). Synthesis of nanoporous silicon carbide via the preceramic polymer route. Materials Chemistry and Physics, 113(2-3), 861-867. <a href="http://dx.doi.org/10.1016/j.matchemphys.2 008.08.064">[More Information]</a> Traini, D., Loreti, G., Jones, A., Young, P. (2008). X-Ray Computed Microtomography for the Study of Modified Release Systems. Microscopy and Analysis, 22(1), 13-15. <a href="http://dx.doi.org/10.1111/j.1471-0528.200 8.01693.x">[More Information]</a> Curthoys, I., Uzun-Coruhlu, H., Wong, C., Jones, A., Bradshaw, A. (2009). The Configuration and Attachment of the Utricular and Saccular Maculae to the Temporal Bone: New Evidence from Microtomography-CT Studies of the Membranous Labyrinth. Annals of the New York Academy of Sciences, 1164 (1), 13-18. <a href="http://dx.doi.org/10.1111/j.1749-6632.200 8.03729.x">[More Information]</a> Greco, M., Jones, A., Spooner-Hart, R., Holford, P. (2008). X-ray computerised microtomography (MicroCT): a new technique for assessing external and internal morphology of bees. Journal of Apicultural Research, 47(4), 286-291. <a href="http://dx.doi.org/10.3896/IBRA.1.47.4.09" >[More Information]</a> 2008 Barbagallo, L., Shen, G., Jones, A., Swain, M., Petocz, P., Darendeliler, M. (2008). A Novel Pressure Film Approach for Determining the Force Imparted by Clear Removable Thermoplastic Appliances. Annals of Biomedical Engineering, 36(2), 335-341. <a 2007 Uzun-Coruhlu, H., Curthoys, I., Jones, A. (2007). A new approach to visualizing the membranous structures of the inner ear - high resolution X-ray micro-tomography. Acta Oto-Laryngologica, 127, 568-573. <a href="http://dx.doi.org/10.1080/0001648060095 1509">[More Information]</a> Publications for Allan Jones Jones, A., Reztsov, A., Loo, B. (2007). Application of invariant grey scale features for analysis of porous minerals. Micron, 38, 40-48. <a href="http://dx.doi.org/10.1016/j.micron.2006.04 .004">[More Information]</a> Uzun-Coruhlu, H., Curthoys, I., Jones, A. (2007). Attachment of the utricular and saccular maculae to the temporal bone. Hearing Research, 233, 77-85. <a href="http://dx.doi.org/10.1016/j.heares.2007.07. 008">[More Information]</a> Huang, T., Jones, A., He, L., Darendeliler, M., Swain, M. (2007). Characterisation of enamel white spot lesions using X-ray-micro-tomography. Journal of Dentistry, 35(9), 737-743. <a href="http://dx.doi.org/10.1016/j.jdent.2007.06.0 01">[More Information]</a> Wang, Y., Chang, H., Wertheim, D., Jones, A., Jackson, C., Coombes, A. (2007). Characterisation of the macroporosity of polycaprolactone-based biocomposites and release kinetics for drug delivery. Biomaterials, 28(31), 4619-4627. <a href="http://dx.doi.org/10.1016/j.biomaterials.20 07.07.006">[More Information]</a> Golding, R., Jones, A. (2007). Micro-CT as a novel technique for 3D reconstruction of molluscan anatomy. Molluscan Research, 27(3), 123-128. Foo, M., Jones, A., Darendeliler, M. (2007). Physical Properties of Root Cementium: Part 9. Effect of Systemic Fluoride Intake on Root Resorption in Rats. American Journal of Orthodontics and Dentofacial Orthopedics, 131(1), 34-43. <a href="http://dx.doi.org/10.1016/j.ajodo.2005.02. 030">[More Information]</a> Wang, Y., Chang, H., Jones, A., Wertheim, D., Coombes, A. (2007). Polycaprolactone-based biocomposite scaffolds for tissue engineering: Assessment of macroporosity using micro computed tomography (micro-CT). TERMIS-EU Meeting 2005, United states: Mary Ann Liebert Inc. Publishers. 2006 Dame Carroll, J., Chandra, A., Jones, A., Berend, N., Magnussen, J., King, G. (2006). Airway dimensions measured from microcomputed tomography and high-resolution computed tomography. European Respiratory Journal, 28, 712-720. <a href="http://dx.doi.org/10.1183/09031936.06.00 012405">[More Information]</a> Darendeliler, M., Shen, G., Harris, D., Foo, M., Jones, A. (2006). Orthodontically induced root resorption and a possible preventive solution - a comprehensive study with animal and clinical models. Biological Mechanisms of Tooth Eruption, Resorption, and Movement (BMT 2005), Thailand: University of Southern California, School of Dentistry, 2006/ OS Printing House Co., Ltd, Bangkok. Harris, D., Jones, A., Darendeliler, M. (2006). Physical properties of root cementum: Part 8 Volumetric analysis of root resorption craters after application of controlled intrusive light and heavy orthodontic forces: A microcomputed tomography scan study. American Journal of Orthodontics and Dentofacial Orthopedics, 130(5), 639-647. <a href="http://dx.doi.org/10.1016/j.ajodo.2005.01. 029">[More Information]</a> Darendeliler, M., Shen, G., Omar, H., Zoellner, H., Zea, A., Jones, A. (2006). The biological effects of mechanical vibration on alveolar and cranial bone remodeling - a combined study of tooth movement and defect healing. Biological Mechanisms of Tooth Eruption, Resorption, and Movement (BMT 2005), Thailand: University of Southern California, School of Dentistry, 2006/ OS Printing House Co., Ltd, Bangkok. Omar, H., Darendeliler, M., Zoellner, H., Jones, A., Petocz, P. (2006). The effect of low-magnitude, high-frequency mechanical stimuli on non-weightbearing cranial bone's quantity, quality and rate of healing. Biological Mechanisms of Tooth Eruption, Resorption, and Movement (BMT 2005), Thailand: University of Southern California, School of Dentistry, 2006/ OS Printing House Co., Ltd, Bangkok. Ratinac, K., Gilbert, R., Ye, L., Jones, A., Ringer, S. (2006). The effects of processing and organoclay properties on the structure of poly(methyl methacrylate)-clay nanocomposites. Polymer, 47, 6337-6361. <a href="http://dx.doi.org/10.1016/j.polymer.2006.0 7.005">[More Information]</a> Ananda, S., Marsden, V., Vekemans, K., Korkmaz, E., Tsafnat, N., Soon, L., Jones, A., Braet, F. (2006). The visualization of hepatic vasculature by X-ray micro-computed tomography. Journal of Electron Microscopy, 55(3), 151-155. <a href="http://dx.doi.org/10.1093/jmicro/dfl015">[ More Information]</a> 2005 Jones, A., Foo, E., Darendeliler, M. (2005). The Effect of Systemic Fluoride Intake on Root Resorption in Wistar Rats. 8th International Conference on Biological Mechanisms of Tooth Eruption, Resorption and Movement, : SPIE International Society for Optical Engineering. Publications for Allan Jones Jones, A., Harris, D., Darendeliler, M. (2005). Volumetric analysis of root resorption craters after application of controlled intrusive light and heavy orthodontic forces: A micro CT Scan study. 8th International Conference on Biological Mechanisms of Tooth Eruption, Resorption and Movement, : SPIE - International Society for Optical Engineering. Burrow, C., Jones, A., Young, G. (2005). X-ray microtomography of 410 million-year-old optic capsules from placoderm fishes. Micron, 36(6), 551-557. <a href="http://dx.doi.org/10.1016/j.micron.2005.05 .005">[More Information]</a> 2004 Chan, E., Darendeliler, M., Jones, A., Kaplin, I. (2004). A Calibration Method Used For Volumetric Measurement Of Orthodontically Induced Root Resorption Craters. Annals of Biomedical Engineering, 32(6), 880-888. <a href="http://dx.doi.org/10.1023/B:ABME.00000 30263.68615.82">[More Information]</a> Chan, E., Darendeliler, M., Petocz, P., Jones, A. (2004). A New Method For Volumetric Measurement Of Orthodontically Induced Root Resorption Craters. European Journal of Oral Sciences, 112(2), 134-139. <a href="http://dx.doi.org/10.1111/j.1600-0722.200 4.00118.x">[More Information]</a> Darendeliler, M., Chan, E., Kharbanda, O., Srivicharnkul, P., Rex, T., Swain, M., Jones, A., Petocz, P. (2004). Changes In Physical And Mineral Dimensions Of Human Cementum In Association With Root Resorption Craters At Different Orthodontic Force Levels. In Ze'ev Davidovitch and James Mah (Eds.), Biological Mechanisms of Tooth Movement and Craniofacial Adaptation: proceedings of the fourth international conference held at New York University College of Dentistry August 18-21, 2003, (pp. 91-111). Boston, Mass., USA: Harvard Society for the Advancement of Orthodontics. Zheng, Q., Milthrope, B., Jones, A. (2004). Direct Neural Network Application For Automated Cell Recognition. Cytometry, 57A(1), 1-9. Jones, A., Chang, Y. (2004). Recognition Of Inflammatory Cell Types Directly From Colour Images. Darendeliler, M., Kharbanda, O., Chan, E., Srivicharnkul, P., Rex, T., Swain, M., Jones, A., Petocz, P. (2004). Root Resorption And Its Association With Alterations In Physical Properties, Mineral Contents And Resorption Craters In Human Premolars Following Application Of Light And Heavy Controlled Orthodontic Forces. Orthodontics and Craniofacial Research, 7(2), 79-97. <a href="http://dx.doi.org/10.1111/j.1601-6343.200 4.00281.x">[More Information]</a> 2003 Cox, G., Kable, E., Jones, A., Fraser, I., Manconi, F., Gorrell, M. (2003). 3-Dimensional imaging of collagen using second harmonic generation. Journal of Structural Biology, 141(1), 53-62. <a href="http://dx.doi.org/10.1016/S1047-8477(02) 00576-2">[More Information]</a> Payne, B., Jones, A., Dwarte, D., Ringer, S. (2003). Microscopy Based Outreach Education Programs. In A. Méndez-Vilas (Eds.), Formatex Microscopy Book Series: Science, Technology and Education in Microscopy: an Overview, (pp. 764-775). Spain: Formatex. Gaus, K., Gratton, E., Kable, E., Jones, A., Gelissen, I., Kritharides, L., Jessup, W. (2003). Visualizing lipid structure and raft domains in living cells with two-photon microscopy. Proceedings of the National Academy of Sciences of the United States of America (PNAS), 100(26), 15554-15559. <a href="http://dx.doi.org/10.1073/pnas.253438610 0">[More Information]</a>