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Center for Bioinformatics and Genomic Systems
Engineering
Bioinformatics, Computational and Systems Biology
Research in Life Science and Agriculture.
Aniruddha Datta
Professor ECE
Director CBGSE
Research Focus Areas:
Genomic Signal Processing and Control Systems
Bio Research Focus:
1. Cancer Therapy Design using Pathway Logic
2. Exploiting Connections between Cancer and Metabolism
3. Heterogeneity of Cancer Tissue
Charles Johnson
Director- Texas AgriLife Genomics and
Bioinformatics
Executive Director – Center Bioinformatics &
Genomic Systems Engineering
979-862-3287
[email protected]
http://txgen.tamu.edu
• Genomic Technology Development
Next Generation Sequencing
• Genomics
• Bioinformatics and Statistics
• Experimental Design
Krishna Narayanan
Professor
Associate Director CBGSE
Director of Graduate Studies
Electrical & Computer
Engineering
Research projects revolve around understanding the role of structured
codes in multi-terminal information theory, joint source and channel
coding for wireless communications, design and analysis of codes and
decoders for applications in wireless communications, data storage
and optical communications, information forwarding in wireless
networks, design of message passing algorithms for solving
Lagrangian dynamics problems.
E-Mail: [email protected]
Ulisses Braga-Neto
Associate Professor
Web: http://www.ece.tamu.edu/~ulisses
E-Mail: [email protected]
Telephone: (979) 862-6441
His research interests include small- sample error
estimation, statistical pattern recognition, and
genomic signal processing, with applications in
the study of cancer and infectious diseases.
Xiaoning Qian
Position: Assistant Professor
http://www.ece.tamu.edu/~xqian/
E-Mail: [email protected]
Telephone: +1-979-845-6268
Research Interest
•Bioinformatics:
– Analysis and intervention in biological networks;
– Functional data analysis on genomic and proteomic datasets.
•Biomedical image processing and analysis:
– Image segmentation and robust boundary finding;
– Shape-based similarity retrieval in multimedia databases.
Byung-Jun Yoon
Position: Associate Professor
Web: http://www.ece.tamu.edu/~bjyoon
E-Mail: [email protected]
Telephone: (979) 845-6942
Genomic Signal Processing (GSP), Bioinformatics, and Systems Biology
Probabilistic Graphical Models & Algorithms, and Their Application in
Computational Biology, Noncoding RNA (ncRNA) Prediction, RNA Sequence
Analysis, Network Biology & Comparative Analysis of Biological Networks
Peng Yu
Assistant Professor, ECE, TAMU
Web: http://yubiolab.wordpress.com/
E-Mail: [email protected]
•Statistical HTS data analysis
•Regulation of gene expression
•Genomics of complex diseases
•Metagenomics
•Structural genomics
Yang Shen
Assistant Professor
Web: http://ttic.uchicago.edu/~yshen
E-Mail: [email protected]
Research interests:
Modeling, simulation, and engineering of biomolecules
and bimolecular systems.
Ph.D., Systems Engineering, Boston University, 2008
B.E., Automation, University of Science and Technology of China, 2002
Computational Molecular Biology, Structural prediction of protein
interactions, Drug design, Computational Systems Biology,
Systems therapeutics, Synthetic biology, Bioinformatics,.
Optimization and learning, Systems and control
Jean-Francois ChamberlandTremblay
Associate Professor: Electrical
& Computer Engineering
His research interests are in the areas of
communication and information theory,
decision and control, computer systems and
networks, statistical inference, learning, and
applied probability.
E-Mail: [email protected]
Tie Liu
Associate Professor
Electrical & Computer
Engineering
His primary research interest is in
the area of information theory and
statistical information processing.
E-Mail: [email protected]
Research Faculty
Tao Hu
Position: Research Assistant Professor
E-Mail: [email protected]
Chao Sima
Position: Research Assistant Professor
E-Mail: [email protected]
Jianping Hua
Position: Research Assistant Professor
E-Mail: [email protected]
Noushin Ghaffari, Ph.D.
Bioinformatics Scientist
Genomics and Bioinformatics Service
E-Mail: [email protected]
Telephone: (979) 862-2784
Head of bioinformatics consulting and training
for AgriLife’s Genomics and Bioinformatics Unit.
Research interest bioinformatics
and method performance evaluation
Marcel Brun, Ph.D.
Bioinformatics Analyst
Genomics and Bioinformatics Service
Email: [email protected]
Head of software development with a
research focused on genomics signal
processing and machine learning. Formally
head of algorithm development at TGen.
Shichen Wang, Ph.D.
Bioinformatics Scientist Genomics and
Bioinformatics Service
(979) 862-2791
[email protected]
Research interests: statistical genetics, genotyping
and sequencing related bioinformatics