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RAT DISSECTION GUIDE INTRODUCTION Rats are often used for dissection because they are readily available and they possess the typical mammalian body plan. Most of what you learn on the rat is applicable to the anatomy of other mammals, such as humans. External Features Muscular System The Mouth - The mouth is the most anterior part of the digestive system. Within the mouth, the food is ground up by chewing and mixed with saliva, which contains carbohydratesplitting enzymes and lubricating mucus within the Salivary glands - There are three pairs of salivary glands. The other glands are more ventral and extend anteriorly under the lower jaw. The saliva, as previously mentioned, contains enzymes, which begin the digestion of carbohydrates, and mucus, which moistens food and sticks it together to facilitate swallowing. The floor of the mouth and pharynx Locate the '''tongue'''. It plays a role in the swallowing response. The food moves from the mouth into a chamber shared by the respiratory system called the '''pharynx''' and on into the ''esophagus'''. The esophagus can be seen under the trachea (a tube recognized by its cartilage rings) in the neck region. Circulatory System The circulatory and respiratory systems are housed in the thoracic cavity. The thoracic cavity are covered by various thin membranes called pericardium. These lubricated surfaces allow the two sets of organs to move vigorously without wearing each other away. The Heart The heart is basically two pumps: one circulates blood to the lungs for oxygenation and the other circulates blood to the body cells. Each side of the heart has an atrium (the anterior chamber that receives blood from a vein) and a ventricle (a thicker walled chamber whose contractions drive the blood into an artery). Right side - The right side of the heart circulates blood to the lungs. The ''right atrium'' receives blood returning from the body via two large veins called the ''superior and inferior vena cava''. When the right atrium contracts, blood is forced into the ''right ventricle''. The contraction of this chamber pushes the blood into the ''pulmonary artery'' and on to the lungs, where it picks up oxygen. Left side - The oxygen-rich blood is returned from the lung to the ''left atrium'' of the heart through the ''pulmonary vein''. Contraction of the left atrium moves the blood into the ''left ventricle''. The powerful contraction of the muscles of the left ventricle drives the blood out of the heart through the ''aorta'' to the rest of the body. Valves - The effectiveness of these contractions is increased by the presence of valves that prevent the backflow of blood. Locate the ''semilunar valves'' between the aorta and the left ventricle. A similar set of valves is found at the junction of the pulmonary artery and the right ventricle. These valves prevent blood from flowing back into the ventricles from the arteries. Between each atrium and its corresponding ventricle is a set of ''atrioventricular valves''. When the ventricles contract, blood is forced against these valves, forcing them shut and preventing the flow of blood back into the atria. Blood Vessels The circulatory system performs the essential duties of transporting oxygen and nutrients to metabolizing body tissue and carries off carbon dioxide and other metabolic waste for eventual removal from the body. The rat has a closed circulatory system, which means that the blood remains within a system of vessels through which it is pumped by the heart. A vessel that carries blood away from the heart to a capillary bed is an ''artery''. A ''vein'' carries blood in the reverse direction, from the capillaries back to the heart. A ''portal vein'' carries blood from one capillary bed to another. Note that normally an artery carries oxygenated blood, and a vein carried deoxygenated blood. However, the pulmonary artery and vein are backward in this regard because they carry the blood between the heart and lungs. Veins Vena cava - The vena cava returns blood from the body to the right atrium. Pulmonary vein- This vein enters the left atrium with blood from the lungs. Internal and external jugular veins - locate these veins in the neck region. These carry blood from the head region back toward the heart. Arteries Aorta - Emerging from the left ventricle, near the midline of the heart, is the '''aortic arch'''. It bends around dorsally, giving rise to three branches very near its origin. Respiratory System Food materials are broken down into simpler subunits by the digestive system, and these simpler substances are delivered to the cells by the circulatory system. Within body cells, simple molecules may be broken down to release energy. Some of this energy is used to form ATP, which can be used to supply energy for cellular activities. The process of breaking down food molecules to form ATP is called cellular respiration. Part of this energy transaction is to pass hydrogen ions along the electron transport chain. At the end of the chain, the hydrogen is joined to its final acceptor, oxygen, forming water (H2O). In the absence of oxygen, the hydrogen transfers are prevented and no ATP can be formed. This is the reason that oxygen must be delivered to the cells. In many invertebrates, the size of the body is small enough for oxygen to reach the cells by diffusion. In larger animals such as rats and humans, however, a respiratory system has evolved, creating an internal surface area large enough to allow oxygen to diffuse into and be carried to the cells by the circulatory system. The respiratory and circulatory systems must function together. Trachea - To reach the lungs, air travels through the nose or mouth to the pharynx and then to the trachea. Find the trachea in the neck region. You will notice that it has C-shaped rings of cartilage to prevent it from collapsing as air rushes through it. This initial portion of the trachea is the larynx or voice box, within which lie the vocal cords. The vocal cords are folds of epithelium that vibrate, producing sounds as air passes over them. Bronchi are the two tubes that branch off the trachea. Thyroid gland The small brownish glandular mass found on either side of the anterior end of the trachea. Thymus gland. This is located directly above the heart. The thymus gland is involved in the development of T cells in the immune system. Lungs - Identify the lungs and note that there are four lobes on the right lung and only one on the left lung. Within the lungs, the bronchioles carry the air to their endings, tiny air sacs. Inside, these air sacs are further partitioned into chambers called alveoli. This greatly increases the surface area available for gas exchange. In fact, our lungs have a greater surface area than our skin. The alveoli are only one cell layer thick and have capillaries immediately outside of them. The gas exchange occurs across these moist surfaces by simple diffusion. Diaphragm - a muscular wall separating the thoracic and abdominal cavities. The Abdominal Organs: Digestive System 1. The coelom is the body cavity within which the viscera (internal organs) are located. The cavity is covered by a membrane called the peritoneum. Parietal Peritoneum - a very thin and shiny membrane that lines the inside of the abdominal wall. Visceral Peritoneum - a very thin and shiny membrane that covers the internal organs of the abdominal cavity. 2. The liver, which is a large, dark colored organ suspended just under the diaphragm. The liver has many functions, one of which is to produce bile which aids in digesting fat. The liver also stores glycogen and transforms wastes into less harmful substances. Rats do not have a gall bladder which is used for storing bile in other animals. 3. The esophagus runs through the diaphragm and moves food from the mouth to the stomach. It is distinguished from the trachea by its lack of cartilage rings. 4. The stomach on the right side (usually) just under the liver. The functions of the stomach include food storage, physical breakdown of food, and the digestion of protein. The opening between the esophagus and the stomach is called the cardiac sphincter. 5. The spleen is about the same color as the liver and is attached to the greater curvature of the stomach. It is shaped like a banana and is associated with the circulatory system and functions in the destruction and recycling of red blood cells. It stores white blood cells and platelets. A person can live without a spleen, but they're more likely to get sick as it helps the immune system function and keeps body fluids balanced. 6. The pancreas is not a clearly identifiable organ but a thin membrane that overlays the stomach and spleen. The pancreas produces digestive enzymes that are sent to the intestine via small ducts (the pancreatic duct). The pancreas also secretes insulin which is important in the regulation of glucose metabolism. Find the pancreas by looking for a thin, membrane looking structure that has the consistency of cottage cheese. 7. The small intestine is a slender coiled tube that receives partially digested food from the stomach (via the pyloric sphincter). The term “small” refers to its diameter, not its length. It consists of three sections: duodenum, ileum, and jejunum. The small intestine leads to the cecum. 8. The cecum is a pouch that connects the large and small intestines. Food is temporarily stored in the cecum while helpful bacteria digest the cellulose found in plant cells. Most herbivores such as the rat have a large cecum. Humans and other omnivores and carnivores have a much smaller cecum which is referred to as the appendix. 10. The mesentery (connective tissue and network of blood vessels that connects the small intestine) of the small intestine, but do not remove the small intestine from its attachment to the stomach and rectum. If you are careful you will be able to stretch it out and untangle it so that you can see the relative lengths of the large and the small intestine. 11. The large intestine, which is the large greenish tube that extends from the small intestine and leads to the anus. The large intestine is also known as the colon. This is where the finals stages of digestion and water absorption occurs and it contains a variety of bacteria to aid in digestion. 12. The rectum - the short, terminal section of the colon between the descending colon and the anus. The rectum temporarily stores feces before they are expelled from the body. The Excretory System The excretory system functions in removing the nitrogenous waste products of cellular metabolism, as well as in removing a number of other materials that may be present in the blood in excess of the body’s needs. However, it conserves materials that are not in excess. In this way it plays a vital role both in excretion and in maintenance of a fairly constant internal environment. Kidneys - Find the pair of bean-shaped kidneys lying against the back muscles on the dorsal side of the animal. These are often embedded in fat. The blood is brought into the kidney for processing and taken out of the kidney via the vessels that can be seen near the medial indentation. Remove some of the fat from around the kidneys and locate the adrenal glands. These are endocrine glands, not involved in excretion and found just anterior to the kidney. The hormone they are most famous for is adrenaline (epinephrine). This substance has a variety of effects on a body, preparing it for emergency situations. Ureter - The material removed from the blood by the kidney is gathered internally in collecting ducts that empty into the larger ureter through which the urine leaves the kidney. Locate this duct as it passes from the indentation on the medial side of each kidney close to the blood vessels. The path of the ureter is toward the posterior end of the animal. Urinary bladder- This sac stores the urine prior to its passage outside the body. The organ is usually contracted in a preserved specimen and appears as a small pear-shaped muscular sac. Urethra - This is the tube the urine flows through as it exits the body. It can be seen if the mesenteries holding the bladder are dissected away and the bladder is displaced dorsally. In the male, the urethra extends through the penis. It will carry sperm from the testes and secretions of reproductive accessory glands as well as the urine. In the female, the urethra opens to the exterior separately from the reproductive system. The Reproductive System The Male Scrotum - You have already identified the scrotum, the sac housing the testes. In the nonreproductive season, the testes may be withdrawn into the abdominal cavity. Testes - Cut open the scrotum to reveal the testes. Slit one testis open and notice that it contains a mass of tubules. These are the ''seminiferous tubules'', where the sperm are produced. In addition to sperm, the testis produces male sex hormones. Epididymis - The sperm pass from the seminiferous tubules into this highly coiled tubule. The epididymis covers both ends and the lateral surface of the testis. It collects and stores sperm. Vas deferens - This tubule carries the sperm from the epididymis to the urethra. It passes anteriorly and joins the urethra very close to the spot where the latter leaves the urinary bladder. Urethra - You have previously identified this tubule. Accessory glands - The secretions of all the accessory glands form the seminal fluid that carries the sperm during ejaculation, activates the sperm, provides some nutrients for them, and contains substances that help to neutralize the acidity of the vagina. The products of the coagulating gland probably contribute to the vaginal plug, which is formed in the female rat after copulation. There are several accessory glands, we will only concern ourselves with "seminal vesicles" and the "prostate gland". a. The vesicular glands and the coagulating glands comprise the "seminal vesicles". They are lumpy brown glands located to the left and right of the urinary bladder shaped like wings. b. The ''prostate gland'' is large and has lobes. Look for it where the urethra and vas deferens join. It usually surrounds the bladder and it is partially wrapped around the penis. The seminal vesicles and the prostate gland secrete materials that form the seminal fluid (semen). Penis - You have already identified this structure. Its erectile tissue is composed of three cylindrical masses of sponge-like vascular tissue. The Female Vagina- The short gray tube lying dorsal to the urinary bladder. Uterus - Locate this structure in the region posterior to the kidneys. In the rat, the uterus is actually divided into two complete uteri, which open separately into the vagina. The two uterus system is know as the unterine horn. Open the uteri and examine any embryos you find. Ovaries - These are located near the anterior end of the uterus. They are often embedded in fat, which must be carefully dissected away. The ovaries produce the ova, which, if fertilized, will develop into embryos. Oviducts - Each oviduct is a highly coiled tubule found on the surface of an ovary. The ova pass from the ovary into the oviduct, which carries them to the uterus. The ovary is actually surrounded by the funnel-shaped opening of the oviduct, so that the eggs are released directly into this tubule. Rat Dissection Identification Sheet You should be able to identify all of the following organs of the rat. In addition, you should be able to name the organ system that each organ belongs to, as well as name at least one function for each. Non-reproductive structures: 1. Salivary gland 2. Trachea 3. Esophagus 4. Thymus 5. Aorta 6. Heart 7. Lungs 8. Liver 9. Diaphragm 10. Mesentery 11. Stomach 12. Caecum 13. Small intestine 14. Kidney 15. Large intestine (colon) 16. Ureter 17. Pancreas 18. Urinary bladder 19. Spleen Reproductive structures Female 1. Ovary 2. Uterus Male 1. Seminal vesicles 2. Vas deferens 3. Epididymis 4. Testes 5. Prostate