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Figure 15 - GEP Community Server
Figure 15 - GEP Community Server

... Annotation of Transcription Start Sites in Drosophila ...
Role of the p21 Protein in the Fanconi Anemia Pathway
Role of the p21 Protein in the Fanconi Anemia Pathway

... • Major target of the tumor suppressor transcription factor p53 Figure 8.4 The Biology of Cancer (© Garland Science 2007) ...
C. neoformans
C. neoformans

... laurentii and C. kuetzingii as a sole source of food The human pathogenic yeast C. neoformans kills C. elegans Several C. neoformans genes, previously shown to be involved in mammalian virulence, also play a role in C. elegans killing The nematode response to C. neoformans may have some interesting ...
Lab #2
Lab #2

... have increasing density near zero, e.g. sequence counts Probability density ...
No Slide Title
No Slide Title

... Diagnose malignant tissue from normal one Drug effect study ...
Fatty Acid Transport Protein 4 (FATP4) Prevents Light
Fatty Acid Transport Protein 4 (FATP4) Prevents Light

... Genetic Analyzer. Database search was performed in the internet server http://www. ncbi.nlm.nih.gov/BLAST. Statistical analysis. Statistical significance was determined with an unpaired, two-tailed Student’s t test. P values ⬍0.05 were considered to be statistically significant. Data are expressed a ...
Matthew Kwong - GEP Community Server
Matthew Kwong - GEP Community Server

... 12 Genomes Consortium paper titled, "Evolution of genes and genomes on the Drosophila phylogeny" demonstrates the wealth of knowledge that can be drawn from comparing annotated genomes.1 This paper is a continuation of the Drosophila annotation project and discusses the work in annotating contig 10 ...
Discussion of Poultry Genetics
Discussion of Poultry Genetics

... pigmentation. Sometimes the white ear lobe can have a greenish or yellowish tinge. The number and  location of the genes responsible for white ear lobes is not presently known.  Genetics of eggshell color  Brown eggshell color is a complex trait and as many as 13 genes have been proposed to account  ...
Specification of floral organs in Arabidopsis
Specification of floral organs in Arabidopsis

... several studies showing that AP1 and AP2 indeed play important roles in the specification of floral meristems (Okamuro et al., 1997; Ferrandiz et al., 2000). Furthermore, it has been shown that while AP2 represses AG expression in the outer two floral whorls (thus fulfilling one of the proposed role ...
Powerpoint Presentation: Meiosis
Powerpoint Presentation: Meiosis

... separate on the spindle Each cell will receive a copy of each chromosome type (i.e. it will receive n chromatids all different) The genes on the different chromosomes are recombined (shuffled) ...
Electrophoresis of Hemoglobin H
Electrophoresis of Hemoglobin H

... H CH2 ...
CRISPR-Cas9 Mouse Toolbox
CRISPR-Cas9 Mouse Toolbox

... CRISPR-Cas9 is a versatile genome editing technology for studying the function of genetic elements. To broadly enable the application of Cas9 in vivo and ex vivo, we established Credependent and constitutively expressing Cas9 knockin mice (Platt et al., Cell 2014). In these mice the CRISPR-Cas9 syst ...
Karyotype WS (Disorders )
Karyotype WS (Disorders )

... humans: Turner's syndrome (monosomy XO). The frequency of nondisjunction is quite high in humans, but the results are usually so devastating to the growing zygote that miscarriage occurs very early in the pregnancy. If the individual survives, he or she usually has a set of symptoms - a syndrome - c ...
Gene Regulation and Systems Biology GA
Gene Regulation and Systems Biology GA

... simulate natural genetic operators,20–22 they are ­useful when the closed-form optimization technique can not be applied. Further, because the GA-based design algorithm can simultaneously evaluate many points in the kinetic parameter space, it is more likely to converge toward the globally optimal t ...
Familial nonrandom inactivation linked to the X inactivation
Familial nonrandom inactivation linked to the X inactivation

... dosage of proteins encoded by genes on the X chromosome is equalised in males and females. The choice of which of the two X chromosomes is the active one is usually random. Although stochastic events may account for a less than equal distribution of the two cell lineages in the mosaic female (as the ...
jxb.oxfordjournals.org - Oxford Academic
jxb.oxfordjournals.org - Oxford Academic

... of Wx is regulated at the transcriptional and post-transcriptional levels. The MYC transcriptional factor OsBP-5 can form a heterodimer with an ethylene-responsive element binding protein (EREBP), OsEBP-89, to regulate Wx expression synergistically. Knockdown of OsBP-5 using RNA interference results ...
Factors Affecting synonymous codon Usage Bias in chloroplast
Factors Affecting synonymous codon Usage Bias in chloroplast

... consequence of selection to maximize translational speed, minimize the costs of proofreading, or maximize the accuracy of translation; by using codons which match common tRNAs or which bind the tRNA efficiently, it is thought that the time to find and bind the correct tRNA is minimized, along with t ...
Regulation of phenylalanine biosynthesis in Escherichia coli K
Regulation of phenylalanine biosynthesis in Escherichia coli K

... chromosome; pheR mutants acquired the wild-type phenotype when either F117 (which covers the 93-min region) or F116 (which covers min 59 to 65) was introduced into the cell. A rifampin resistance mutation, rpoB366, was found to derepress transcription of the pheA operon. pheR and rpoB366 affected tw ...
7.1 Introduction
7.1 Introduction

... cerevisiae geneticists are frequently in the position of studying mutations whose identities are unknown. Often, the gene's identity is determined by cloning (see Genetics 7.17 Isolation of S. cerevisiae genes by cloning). However, in some cases, cloning is difficult or is not performed at an early ...
Families of SMA - Children with Spinal Muscular Atrophy
Families of SMA - Children with Spinal Muscular Atrophy

...  Two SMN1 copies on one chromosome and none on other  Frequency ~8% of people not affected with SMA  We have seen 1 case with 2 copies in blood and <2 copies in sperm Resolve new mutation from 2+0 by linkage analysis If new mutation, test father’s sperm for mosaicism ...
Genetics Part I
Genetics Part I

... It is important to note that it is not possible to directly observe an individual's genotype. We can only observe the phenotype and infer the genotype. This learning activity is opposite to real life. However, we do it this way to learn how to decode genotypes. If we treat each allele independently, ...
Codon usage and lateral gene transfer in Bacillus subtilis Ivan
Codon usage and lateral gene transfer in Bacillus subtilis Ivan

... rate. Bacteria are only rarely growing exponentially, and the other states of growth are certainly as important for survival and evolution of the population. Analysis of different codon usage biases may provide an important hint to the function of a gene by classifying it together with genes express ...
Cloning and Sequencing of a Gene from Bacillus
Cloning and Sequencing of a Gene from Bacillus

... The degree of homology of the DNA from different species of Bacillus has previously been studied by both interspecific transformation and DNA hybridization (Seki et al., 1975, 1979). Interspecific transformation, however, is known to be extremely inefficient (te Riele & Venema, 1982a). There is evid ...
3 Shapes of Bacteria
3 Shapes of Bacteria

... Endospore•a thick celled structure that forms inside the cell •they are the major cause of food poisoning •allows the bacteria to survive for many years •they can withstand boiling, freezing, and extremely dry conditions •it encloses all the nuclear materials and some cytoplasm ...
The Rate and Tract Length of Gene Conversion between
The Rate and Tract Length of Gene Conversion between

... It is relatively straightforward to develop an empirical system for estimating gene conversion tract length by modifying the transgenic system for estimating the gene conversion rate. Figure 1 illustrates such a strategy, which has a selected marker at position 432 bp. In addition to the selected ma ...
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NEDD9

Neural precursor cell expressed developmentally down-regulated protein 9 (NEDD-9) is a protein that in humans is encoded by the NEDD9 gene. NEDD-9 is also known as enhancer of filamentation 1 (EF1), CRK-associated substrate-related protein (CAS-L), and Cas scaffolding protein family member 2 (CASS2). An important paralog of this gene is BCAR1.
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